RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 EIF2AK4Q9P2K8 1649 aaKnown RBP29.56■■■□□ 2.32
HMGB3P22-201ENST00000442010 SHANK2Q9UPX8 1470 aa29.56■■■□□ 2.32
HMGB3P22-201ENST00000442010 ILDR1Q86SU0 546 aaPredicted RBP29.56■■■□□ 2.32
HMGB3P22-201ENST00000442010 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
HMGB3P22-201ENST00000442010 ZNF142P52746 1687 aaPredicted RBP29.54■■■□□ 2.32
HMGB3P22-201ENST00000442010 MYO3AQ8NEV4 1616 aa29.54■■■□□ 2.32
HMGB3P22-201ENST00000442010 DAPK1P53355 1430 aa29.52■■■□□ 2.32
HMGB3P22-201ENST00000442010 DUOX2Q9NRD8 1548 aa29.5■■■□□ 2.31
HMGB3P22-201ENST00000442010 MROH1Q8NDA8 1641 aa29.49■■■□□ 2.31
HMGB3P22-201ENST00000442010 PZPP20742 1482 aa29.47■■■□□ 2.31
HMGB3P22-201ENST00000442010 CEP170BQ9Y4F5 1589 aaPredicted RBP29.47■■■□□ 2.31
HMGB3P22-201ENST00000442010 ZC3H13Q5T200 1668 aaKnown RBP29.46■■■□□ 2.31
HMGB3P22-201ENST00000442010 WASHC2CQ9Y4E1 1318 aa29.45■■■□□ 2.31
HMGB3P22-201ENST00000442010 NCOA1Q15788 1441 aa29.45■■■□□ 2.31
HMGB3P22-201ENST00000442010 CAMSAP1Q5T5Y3 1602 aa29.45■■■□□ 2.3
HMGB3P22-201ENST00000442010 KIF15Q9NS87 1388 aa29.43■■■□□ 2.3
HMGB3P22-201ENST00000442010 ABCC3O15438 1527 aa29.43■■■□□ 2.3
HMGB3P22-201ENST00000442010 DMRT2Q9Y5R5 561 aa29.42■■■□□ 2.3
HMGB3P22-201ENST00000442010 PTPRTO14522 1441 aa29.41■■■□□ 2.3
HMGB3P22-201ENST00000442010 ERBINQ96RT1 1412 aa29.4■■■□□ 2.3
HMGB3P22-201ENST00000442010 FBXO31Q5XUX0 539 aaPredicted RBP29.4■■■□□ 2.3
HMGB3P22-201ENST00000442010 CEP152O94986 1710 aa29.4■■■□□ 2.3
HMGB3P22-201ENST00000442010 A2ML1A8K2U0 1454 aa29.37■■■□□ 2.29
HMGB3P22-201ENST00000442010 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
HMGB3P22-201ENST00000442010 PLA2R1Q13018 1463 aa29.36■■■□□ 2.29
HMGB3P22-201ENST00000442010 PRDM15P57071 1507 aaPredicted RBP29.36■■■□□ 2.29
HMGB3P22-201ENST00000442010 DEPDC5O75140 1603 aa29.36■■■□□ 2.29
HMGB3P22-201ENST00000442010 TNRQ92752 1358 aa29.36■■■□□ 2.29
HMGB3P22-201ENST00000442010 FBXO41Q8TF61 875 aa29.34■■■□□ 2.29
HMGB3P22-201ENST00000442010 ADGRL2O95490 1459 aa29.34■■■□□ 2.29
HMGB3P22-201ENST00000442010 CFAP65Q6ZU64 1925 aaKnown RBP29.33■■■□□ 2.29
HMGB3P22-201ENST00000442010 ANKRD30AQ9BXX3 1397 aa29.33■■■□□ 2.29
HMGB3P22-201ENST00000442010 CHIC2Q9UKJ5 165 aa29.32■■■□□ 2.28
HMGB3P22-201ENST00000442010 SPATA31D1Q6ZQQ2 1576 aa29.31■■■□□ 2.28
HMGB3P22-201ENST00000442010 FAM50AQ14320 339 aaKnown RBP29.3■■■□□ 2.28
HMGB3P22-201ENST00000442010 CERKQ8TCT0 537 aa29.28■■■□□ 2.28
HMGB3P22-201ENST00000442010 NCKAP5LQ9HCH0 1330 aa29.27■■■□□ 2.28
HMGB3P22-201ENST00000442010 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
HMGB3P22-201ENST00000442010 ERVK-7P63135 1459 aa29.25■■■□□ 2.27
HMGB3P22-201ENST00000442010 PKD2Q13563 968 aa29.25■■■□□ 2.27
HMGB3P22-201ENST00000442010 VWDEQ8N2E2 1590 aa29.24■■■□□ 2.27
HMGB3P22-201ENST00000442010 POLR1AO95602 1720 aaPredicted RBP29.23■■■□□ 2.27
HMGB3P22-201ENST00000442010 ARHGAP31Q2M1Z3 1444 aa29.23■■■□□ 2.27
HMGB3P22-201ENST00000442010 LTBP4Q8N2S1 1624 aa29.23■■■□□ 2.27
HMGB3P22-201ENST00000442010 UGGT1Q9NYU2 1555 aa29.2■■■□□ 2.26
HMGB3P22-201ENST00000442010 LMTK2Q8IWU2 1503 aa29.19■■■□□ 2.26
HMGB3P22-201ENST00000442010 NEURL4Q96JN8 1562 aa29.18■■■□□ 2.26
HMGB3P22-201ENST00000442010 PPARGC1BQ86YN6 1023 aaKnown RBP29.17■■■□□ 2.26
HMGB3P22-201ENST00000442010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.17■■■□□ 2.26
HMGB3P22-201ENST00000442010 ANKRD50Q9ULJ7 1429 aa29.15■■■□□ 2.26
HMGB3P22-201ENST00000442010 KANK1Q14678 1352 aa29.14■■■□□ 2.26
HMGB3P22-201ENST00000442010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.25
HMGB3P22-201ENST00000442010 THEMISQ8N1K5 641 aaPredicted RBP29.13■■■□□ 2.25
HMGB3P22-201ENST00000442010 UBR1Q8IWV7 1749 aa29.13■■■□□ 2.25
HMGB3P22-201ENST00000442010 ROCK1Q13464 1354 aa29.11■■■□□ 2.25
HMGB3P22-201ENST00000442010 EFCAB6Q5THR3 1501 aa29.08■■■□□ 2.25
HMGB3P22-201ENST00000442010 ZNF335Q9H4Z2 1342 aaPredicted RBP29.07■■■□□ 2.24
HMGB3P22-201ENST00000442010 MED14O60244 1454 aa29.06■■■□□ 2.24
HMGB3P22-201ENST00000442010 UNC13BO14795 1591 aa29.05■■■□□ 2.24
HMGB3P22-201ENST00000442010 IQSEC2Q5JU85 1478 aa29.05■■■□□ 2.24
HMGB3P22-201ENST00000442010 ANKLE2Q86XL3 938 aa29.05■■■□□ 2.24
HMGB3P22-201ENST00000442010 PIK3C2BO00750 1634 aa29.03■■■□□ 2.24
HMGB3P22-201ENST00000442010 SYNMO15061 1565 aa29.02■■■□□ 2.24
HMGB3P22-201ENST00000442010 TET3O43151 1660 aa29.02■■■□□ 2.24
HMGB3P22-201ENST00000442010 RRBP1Q9P2E9 1410 aaKnown RBP29.02■■■□□ 2.24
HMGB3P22-201ENST00000442010 NOS1P29475 1434 aa29.01■■■□□ 2.23
HMGB3P22-201ENST00000442010 KDM5AP29375 1690 aaKnown RBP29■■■□□ 2.23
HMGB3P22-201ENST00000442010 IQGAP1P46940 1657 aa29■■■□□ 2.23
HMGB3P22-201ENST00000442010 GCC2Q8IWJ2 1684 aa28.99■■■□□ 2.23
HMGB3P22-201ENST00000442010 NPHP4O75161 1426 aaPredicted RBP28.99■■■□□ 2.23
HMGB3P22-201ENST00000442010 SLIT1O75093 1534 aa28.99■■■□□ 2.23
HMGB3P22-201ENST00000442010 ARHGAP23Q9P227 1491 aa28.98■■■□□ 2.23
HMGB3P22-201ENST00000442010 RPRD2Q5VT52 1461 aaKnown RBP28.97■■■□□ 2.23
HMGB3P22-201ENST00000442010 ITGAEP38570 1179 aa28.95■■■□□ 2.22
HMGB3P22-201ENST00000442010 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
HMGB3P22-201ENST00000442010 IDI1Q13907 227 aa28.93■■■□□ 2.22
HMGB3P22-201ENST00000442010 SCAF11Q99590 1463 aaKnown RBP28.91■■■□□ 2.22
HMGB3P22-201ENST00000442010 E9PCH4 1651 aa28.91■■■□□ 2.22
HMGB3P22-201ENST00000442010 LTKP29376 864 aa28.89■■■□□ 2.22
HMGB3P22-201ENST00000442010 CPS1P31327 1500 aa28.89■■■□□ 2.21
HMGB3P22-201ENST00000442010 STRCP1A6NGW2 1772 aa28.88■■■□□ 2.21
HMGB3P22-201ENST00000442010 TMEM2Q9UHN6 1383 aa28.87■■■□□ 2.21
HMGB3P22-201ENST00000442010 ADGRB3O60242 1522 aa28.86■■■□□ 2.21
HMGB3P22-201ENST00000442010 MYO5BQ9ULV0 1848 aa28.86■■■□□ 2.21
HMGB3P22-201ENST00000442010 SLC52A1Q9NWF4 448 aa28.85■■■□□ 2.21
HMGB3P22-201ENST00000442010 TXNDC2Q86VQ3 553 aa28.84■■■□□ 2.21
HMGB3P22-201ENST00000442010 NUP155O75694 1391 aa28.81■■■□□ 2.2
HMGB3P22-201ENST00000442010 STAG3Q9UJ98 1225 aa28.81■■■□□ 2.2
HMGB3P22-201ENST00000442010 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
HMGB3P22-201ENST00000442010 TMEM131LA2VDJ0 1609 aa28.78■■■□□ 2.2
HMGB3P22-201ENST00000442010 NAIPQ13075 1403 aa28.77■■■□□ 2.2
HMGB3P22-201ENST00000442010 UBAP1LF5GYI3 381 aa28.72■■■□□ 2.19
HMGB3P22-201ENST00000442010 ZFYVE9O95405 1425 aa28.71■■■□□ 2.19
HMGB3P22-201ENST00000442010 LRRC7Q96NW7 1537 aa28.7■■■□□ 2.19
HMGB3P22-201ENST00000442010 SPHKAPQ2M3C7 1700 aa28.7■■■□□ 2.19
HMGB3P22-201ENST00000442010 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
HMGB3P22-201ENST00000442010 XIRP1Q702N8 1843 aaKnown RBP28.67■■■□□ 2.18
HMGB3P22-201ENST00000442010 ALKQ9UM73 1620 aa28.66■■■□□ 2.18
HMGB3P22-201ENST00000442010 RIMS2Q9UQ26 1411 aa28.64■■■□□ 2.18
HMGB3P22-201ENST00000442010 PLEKHG1Q9ULL1 1385 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms