RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 ANKRD30AQ9BXX3 1397 aa24.15■■□□□ 1.46
UBE2F-214ENST00000440223 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
UBE2F-214ENST00000440223 ADGRL2O95490 1459 aa24.13■■□□□ 1.45
UBE2F-214ENST00000440223 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
UBE2F-214ENST00000440223 KDM5DQ9BY66 1539 aa24.11■■□□□ 1.45
UBE2F-214ENST00000440223 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
UBE2F-214ENST00000440223 RRP7BPQ9NSQ0 103 aa24.09■■□□□ 1.45
UBE2F-214ENST00000440223 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
UBE2F-214ENST00000440223 ZC3H13Q5T200 1668 aaKnown RBP24.08■■□□□ 1.45
UBE2F-214ENST00000440223 NCOA1Q15788 1441 aa24.08■■□□□ 1.44
UBE2F-214ENST00000440223 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
UBE2F-214ENST00000440223 ZMYM3Q14202 1370 aa24.05■■□□□ 1.44
UBE2F-214ENST00000440223 LMTK3Q96Q04 1460 aa24.05■■□□□ 1.44
UBE2F-214ENST00000440223 SETD1BQ9UPS6 1966 aaKnown RBP24.05■■□□□ 1.44
UBE2F-214ENST00000440223 MROH1Q8NDA8 1641 aa24.03■■□□□ 1.44
UBE2F-214ENST00000440223 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
UBE2F-214ENST00000440223 NPATQ14207 1427 aa24.02■■□□□ 1.44
UBE2F-214ENST00000440223 PRDM15P57071 1507 aaPredicted RBP24.02■■□□□ 1.44
UBE2F-214ENST00000440223 WASHC2CQ9Y4E1 1318 aa24.01■■□□□ 1.43
UBE2F-214ENST00000440223 ROCK1Q13464 1354 aa24.01■■□□□ 1.43
UBE2F-214ENST00000440223 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
UBE2F-214ENST00000440223 ITGAEP38570 1179 aa24■■□□□ 1.43
UBE2F-214ENST00000440223 UHRF1BP1Q6BDS2 1440 aa24■■□□□ 1.43
UBE2F-214ENST00000440223 CEP152O94986 1710 aa23.99■■□□□ 1.43
UBE2F-214ENST00000440223 ABCC3O15438 1527 aa23.99■■□□□ 1.43
UBE2F-214ENST00000440223 PZPP20742 1482 aa23.96■■□□□ 1.43
UBE2F-214ENST00000440223 ANKRD50Q9ULJ7 1429 aa23.96■■□□□ 1.43
UBE2F-214ENST00000440223 CAMSAP1Q5T5Y3 1602 aa23.95■■□□□ 1.43
UBE2F-214ENST00000440223 KANK1Q14678 1352 aa23.94■■□□□ 1.42
UBE2F-214ENST00000440223 MYO3AQ8NEV4 1616 aa23.94■■□□□ 1.42
UBE2F-214ENST00000440223 ZNF142P52746 1687 aaPredicted RBP23.91■■□□□ 1.42
UBE2F-214ENST00000440223 GCC2Q8IWJ2 1684 aa23.91■■□□□ 1.42
UBE2F-214ENST00000440223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.41
UBE2F-214ENST00000440223 VWDEQ8N2E2 1590 aa23.89■■□□□ 1.41
UBE2F-214ENST00000440223 UNC13BO14795 1591 aa23.88■■□□□ 1.41
UBE2F-214ENST00000440223 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
UBE2F-214ENST00000440223 HSPA2P54652 639 aa23.86■■□□□ 1.41
UBE2F-214ENST00000440223 CEP170BQ9Y4F5 1589 aaPredicted RBP23.86■■□□□ 1.41
UBE2F-214ENST00000440223 TNRQ92752 1358 aa23.85■■□□□ 1.41
UBE2F-214ENST00000440223 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
UBE2F-214ENST00000440223 ARHGAP31Q2M1Z3 1444 aa23.84■■□□□ 1.41
UBE2F-214ENST00000440223 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
UBE2F-214ENST00000440223 ERVK-7P63135 1459 aa23.82■■□□□ 1.4
UBE2F-214ENST00000440223 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
UBE2F-214ENST00000440223 EFCAB6Q5THR3 1501 aa23.81■■□□□ 1.4
UBE2F-214ENST00000440223 FBXO31Q5XUX0 539 aaPredicted RBP23.81■■□□□ 1.4
UBE2F-214ENST00000440223 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
UBE2F-214ENST00000440223 CFAP65Q6ZU64 1925 aaKnown RBP23.8■■□□□ 1.4
UBE2F-214ENST00000440223 NLRP1Q9C000 1473 aa23.8■■□□□ 1.4
UBE2F-214ENST00000440223 TET3O43151 1660 aa23.79■■□□□ 1.4
UBE2F-214ENST00000440223 IQGAP3Q86VI3 1631 aa23.78■■□□□ 1.4
UBE2F-214ENST00000440223 NAIPQ13075 1403 aa23.76■■□□□ 1.39
UBE2F-214ENST00000440223 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
UBE2F-214ENST00000440223 RAB3GAP2Q9H2M9 1393 aa23.74■■□□□ 1.39
UBE2F-214ENST00000440223 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
UBE2F-214ENST00000440223 PLA2R1Q13018 1463 aa23.73■■□□□ 1.39
UBE2F-214ENST00000440223 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
UBE2F-214ENST00000440223 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
UBE2F-214ENST00000440223 HRCP23327 699 aa23.7■■□□□ 1.38
UBE2F-214ENST00000440223 NUP155O75694 1391 aa23.69■■□□□ 1.38
UBE2F-214ENST00000440223 E9PCH4 1651 aa23.67■■□□□ 1.38
UBE2F-214ENST00000440223 DMRT2Q9Y5R5 561 aa23.67■■□□□ 1.38
UBE2F-214ENST00000440223 SYNMO15061 1565 aa23.66■■□□□ 1.38
UBE2F-214ENST00000440223 POLR1AO95602 1720 aaPredicted RBP23.66■■□□□ 1.38
UBE2F-214ENST00000440223 UBR1Q8IWV7 1749 aa23.66■■□□□ 1.38
UBE2F-214ENST00000440223 NOS1P29475 1434 aa23.66■■□□□ 1.38
UBE2F-214ENST00000440223 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
UBE2F-214ENST00000440223 PIK3C2BO00750 1634 aa23.63■■□□□ 1.37
UBE2F-214ENST00000440223 PTPRTO14522 1441 aa23.63■■□□□ 1.37
UBE2F-214ENST00000440223 THEMISQ8N1K5 641 aaPredicted RBP23.63■■□□□ 1.37
UBE2F-214ENST00000440223 KDM5AP29375 1690 aaKnown RBP23.63■■□□□ 1.37
UBE2F-214ENST00000440223 PKD2Q13563 968 aa23.62■■□□□ 1.37
UBE2F-214ENST00000440223 ADGRB3O60242 1522 aa23.57■■□□□ 1.36
UBE2F-214ENST00000440223 NCKAP5LQ9HCH0 1330 aa23.57■■□□□ 1.36
UBE2F-214ENST00000440223 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
UBE2F-214ENST00000440223 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
UBE2F-214ENST00000440223 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
UBE2F-214ENST00000440223 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
UBE2F-214ENST00000440223 NEURL4Q96JN8 1562 aa23.54■■□□□ 1.36
UBE2F-214ENST00000440223 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
UBE2F-214ENST00000440223 ANKLE2Q86XL3 938 aa23.53■■□□□ 1.36
UBE2F-214ENST00000440223 SLIT1O75093 1534 aa23.53■■□□□ 1.36
UBE2F-214ENST00000440223 IDI1Q13907 227 aa23.52■■□□□ 1.36
UBE2F-214ENST00000440223 ARHGAP23Q9P227 1491 aa23.51■■□□□ 1.35
UBE2F-214ENST00000440223 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
UBE2F-214ENST00000440223 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
UBE2F-214ENST00000440223 IQGAP1P46940 1657 aa23.49■■□□□ 1.35
UBE2F-214ENST00000440223 MYO5BQ9ULV0 1848 aa23.49■■□□□ 1.35
UBE2F-214ENST00000440223 MED14O60244 1454 aa23.49■■□□□ 1.35
UBE2F-214ENST00000440223 SCAF11Q99590 1463 aaKnown RBP23.49■■□□□ 1.35
UBE2F-214ENST00000440223 TMEM131LA2VDJ0 1609 aa23.48■■□□□ 1.35
UBE2F-214ENST00000440223 NPHP4O75161 1426 aaPredicted RBP23.47■■□□□ 1.35
UBE2F-214ENST00000440223 TRPM2O94759 1503 aa23.46■■□□□ 1.35
UBE2F-214ENST00000440223 SLC4A1APQ9BWU0 796 aaKnown RBP23.46■■□□□ 1.35
UBE2F-214ENST00000440223 TMEM2Q9UHN6 1383 aa23.46■■□□□ 1.35
UBE2F-214ENST00000440223 EID1Q9Y6B2 187 aa23.44■■□□□ 1.34
UBE2F-214ENST00000440223 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
UBE2F-214ENST00000440223 TXNDC2Q86VQ3 553 aa23.41■■□□□ 1.34
UBE2F-214ENST00000440223 KIF1BO60333 1816 aa23.39■■□□□ 1.33
UBE2F-214ENST00000440223 CHGAP10645 457 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms