RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
UBE2F-214ENST00000440223 CCDC180Q9P1Z9 1646 aa34.09■■■■□ 3.05
UBE2F-214ENST00000440223 ABCC9O60706 1549 aa33.23■■■□□ 2.91
UBE2F-214ENST00000440223 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
UBE2F-214ENST00000440223 NACADO15069 1562 aa32■■■□□ 2.71
UBE2F-214ENST00000440223 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
UBE2F-214ENST00000440223 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
UBE2F-214ENST00000440223 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
UBE2F-214ENST00000440223 DCAF1Q9Y4B6 1507 aa31.67■■■□□ 2.66
UBE2F-214ENST00000440223 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
UBE2F-214ENST00000440223 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
UBE2F-214ENST00000440223 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
UBE2F-214ENST00000440223 PABPN1Q86U42 306 aaKnown RBP eCLIP30.99■■■□□ 2.55
UBE2F-214ENST00000440223 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
UBE2F-214ENST00000440223 DNAJC5BQ9UF47 199 aa30.38■■■□□ 2.45
UBE2F-214ENST00000440223 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
UBE2F-214ENST00000440223 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
UBE2F-214ENST00000440223 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
UBE2F-214ENST00000440223 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
UBE2F-214ENST00000440223 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
UBE2F-214ENST00000440223 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
UBE2F-214ENST00000440223 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
UBE2F-214ENST00000440223 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
UBE2F-214ENST00000440223 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
UBE2F-214ENST00000440223 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
UBE2F-214ENST00000440223 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
UBE2F-214ENST00000440223 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
UBE2F-214ENST00000440223 WIZO95785 1651 aa29.15■■■□□ 2.26
UBE2F-214ENST00000440223 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
UBE2F-214ENST00000440223 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
UBE2F-214ENST00000440223 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
UBE2F-214ENST00000440223 NESP48681 1621 aa28.74■■■□□ 2.19
UBE2F-214ENST00000440223 ERCC6Q03468 1493 aa28.71■■■□□ 2.19
UBE2F-214ENST00000440223 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
UBE2F-214ENST00000440223 PDS5BQ9NTI5 1447 aa28.53■■■□□ 2.16
UBE2F-214ENST00000440223 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
UBE2F-214ENST00000440223 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
UBE2F-214ENST00000440223 CFTRP13569 1480 aa28.45■■■□□ 2.14
UBE2F-214ENST00000440223 CUX2O14529 1486 aa28.41■■■□□ 2.14
UBE2F-214ENST00000440223 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.14
UBE2F-214ENST00000440223 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
UBE2F-214ENST00000440223 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
UBE2F-214ENST00000440223 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
UBE2F-214ENST00000440223 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
UBE2F-214ENST00000440223 MRC2Q9UBG0 1479 aa28.25■■■□□ 2.11
UBE2F-214ENST00000440223 WDR62O43379 1518 aa28.17■■■□□ 2.1
UBE2F-214ENST00000440223 URB2Q14146 1524 aaKnown RBP28.01■■■□□ 2.07
UBE2F-214ENST00000440223 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
UBE2F-214ENST00000440223 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
UBE2F-214ENST00000440223 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
UBE2F-214ENST00000440223 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
UBE2F-214ENST00000440223 CUX1P39880 1505 aa27.63■■■□□ 2.01
UBE2F-214ENST00000440223 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
UBE2F-214ENST00000440223 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
UBE2F-214ENST00000440223 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
UBE2F-214ENST00000440223 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■■□□ 2
UBE2F-214ENST00000440223 EIF4G3O43432 1585 aaKnown RBP27.49■■□□□ 1.99
UBE2F-214ENST00000440223 SOGA1O94964 1423 aa27.48■■□□□ 1.99
UBE2F-214ENST00000440223 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
UBE2F-214ENST00000440223 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
UBE2F-214ENST00000440223 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
UBE2F-214ENST00000440223 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
UBE2F-214ENST00000440223 WDR97A6NE52 1622 aa27.43■■□□□ 1.98
UBE2F-214ENST00000440223 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
UBE2F-214ENST00000440223 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
UBE2F-214ENST00000440223 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.972e-8■■■■□ 19.7
UBE2F-214ENST00000440223 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
UBE2F-214ENST00000440223 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
UBE2F-214ENST00000440223 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
UBE2F-214ENST00000440223 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
UBE2F-214ENST00000440223 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
UBE2F-214ENST00000440223 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
UBE2F-214ENST00000440223 CHD1O14646 1710 aa27.16■■□□□ 1.94
UBE2F-214ENST00000440223 SNAPC4Q5SXM2 1469 aa27.16■■□□□ 1.94
UBE2F-214ENST00000440223 OSCARQ8IYS5 282 aa27.15■■□□□ 1.94
UBE2F-214ENST00000440223 MAGI1Q96QZ7 1491 aaPredicted RBP27.14■■□□□ 1.94
UBE2F-214ENST00000440223 FBLN2P98095 1184 aa27.03■■□□□ 1.92
UBE2F-214ENST00000440223 SYNJ2O15056 1496 aa27.02■■□□□ 1.92
UBE2F-214ENST00000440223 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
UBE2F-214ENST00000440223 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
UBE2F-214ENST00000440223 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
UBE2F-214ENST00000440223 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
UBE2F-214ENST00000440223 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
UBE2F-214ENST00000440223 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
UBE2F-214ENST00000440223 GRIN2AQ12879 1464 aa26.85■■□□□ 1.89
UBE2F-214ENST00000440223 CLASP1Q7Z460 1538 aa26.83■■□□□ 1.89
UBE2F-214ENST00000440223 CUL7Q14999 1698 aa26.79■■□□□ 1.88
UBE2F-214ENST00000440223 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
UBE2F-214ENST00000440223 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
UBE2F-214ENST00000440223 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
UBE2F-214ENST00000440223 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
UBE2F-214ENST00000440223 ARHGEF11O15085 1522 aa26.76■■□□□ 1.87
UBE2F-214ENST00000440223 IGF1RP08069 1367 aa26.71■■□□□ 1.87
UBE2F-214ENST00000440223 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
UBE2F-214ENST00000440223 NUP160Q12769 1436 aa26.71■■□□□ 1.87
UBE2F-214ENST00000440223 CARMIL1Q5VZK9 1371 aa26.59■■□□□ 1.85
UBE2F-214ENST00000440223 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
UBE2F-214ENST00000440223 SHROOM2Q13796 1616 aa26.55■■□□□ 1.84
UBE2F-214ENST00000440223 ARAP1Q96P48 1450 aa26.53■■□□□ 1.84
UBE2F-214ENST00000440223 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms