RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 CFDP1Q9UEE9 299 aaPredicted RBP22.35■■□□□ 1.17
SMC2-204ENST00000440179 CPS1P31327 1500 aa22.35■■□□□ 1.17
SMC2-204ENST00000440179 ADGBQ8N7X0 1667 aa22.34■■□□□ 1.17
SMC2-204ENST00000440179 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
SMC2-204ENST00000440179 POLR1AO95602 1720 aaPredicted RBP22.33■■□□□ 1.17
SMC2-204ENST00000440179 TOM1O60784 492 aa22.32■■□□□ 1.16
SMC2-204ENST00000440179 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
SMC2-204ENST00000440179 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
SMC2-204ENST00000440179 TNRQ92752 1358 aa22.29■■□□□ 1.16
SMC2-204ENST00000440179 MAPK8IP2Q13387 824 aaPredicted RBP22.29■■□□□ 1.16
SMC2-204ENST00000440179 VWDEQ8N2E2 1590 aa22.29■■□□□ 1.16
SMC2-204ENST00000440179 ZNF644Q9H582 1327 aaPredicted RBP22.29■■□□□ 1.16
SMC2-204ENST00000440179 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
SMC2-204ENST00000440179 FBXO31Q5XUX0 539 aaPredicted RBP22.28■■□□□ 1.16
SMC2-204ENST00000440179 PZPP20742 1482 aa22.26■■□□□ 1.15
SMC2-204ENST00000440179 DHX29Q7Z478 1369 aaKnown RBP22.25■■□□□ 1.15
SMC2-204ENST00000440179 RTEL1-TNFRSF6BF6WH68 1400 aa22.24■■□□□ 1.15
SMC2-204ENST00000440179 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
SMC2-204ENST00000440179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMC2-204ENST00000440179 KDM5DQ9BY66 1539 aa22.21■■□□□ 1.15
SMC2-204ENST00000440179 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
SMC2-204ENST00000440179 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
SMC2-204ENST00000440179 MED14O60244 1454 aa22.21■■□□□ 1.15
SMC2-204ENST00000440179 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
SMC2-204ENST00000440179 PPP4R3CPQ6ZMV5 832 aa22.2■■□□□ 1.14
SMC2-204ENST00000440179 NPHP4O75161 1426 aaPredicted RBP22.2■■□□□ 1.14
SMC2-204ENST00000440179 KIF3BO15066 747 aa22.19■■□□□ 1.14
SMC2-204ENST00000440179 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
SMC2-204ENST00000440179 MIA2Q96PC5 1412 aa22.18■■□□□ 1.14
SMC2-204ENST00000440179 NLRP1Q9C000 1473 aa22.17■■□□□ 1.14
SMC2-204ENST00000440179 THEMISQ8N1K5 641 aaPredicted RBP22.16■■□□□ 1.14
SMC2-204ENST00000440179 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
SMC2-204ENST00000440179 STRCP1A6NGW2 1772 aa22.15■■□□□ 1.14
SMC2-204ENST00000440179 IQGAP1P46940 1657 aa22.14■■□□□ 1.13
SMC2-204ENST00000440179 WASHC2CQ9Y4E1 1318 aa22.13■■□□□ 1.13
SMC2-204ENST00000440179 LRRC7Q96NW7 1537 aa22.13■■□□□ 1.13
SMC2-204ENST00000440179 CCDC141Q6ZP82 1450 aa22.12■■□□□ 1.13
SMC2-204ENST00000440179 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
SMC2-204ENST00000440179 CEP162Q5TB80 1403 aa22.11■■□□□ 1.13
SMC2-204ENST00000440179 RNF17Q9BXT8 1623 aaKnown RBP22.09■■□□□ 1.13
SMC2-204ENST00000440179 SYNMO15061 1565 aa22.08■■□□□ 1.12
SMC2-204ENST00000440179 RGS17Q9UGC6 210 aaPredicted RBP22.07■■□□□ 1.12
SMC2-204ENST00000440179 CAMSAP2Q08AD1 1489 aa22.06■■□□□ 1.12
SMC2-204ENST00000440179 ZC3H13Q5T200 1668 aaKnown RBP22.03■■□□□ 1.12
SMC2-204ENST00000440179 ABCC3O15438 1527 aa22.02■■□□□ 1.12
SMC2-204ENST00000440179 ERVK-7P63135 1459 aa22.01■■□□□ 1.11
SMC2-204ENST00000440179 RSPH4AQ5TD94 716 aa22■■□□□ 1.11
SMC2-204ENST00000440179 NCOA2Q15596 1464 aa22■■□□□ 1.11
SMC2-204ENST00000440179 ARHGEF5Q12774 1597 aa21.99■■□□□ 1.11
SMC2-204ENST00000440179 UBR1Q8IWV7 1749 aa21.96■■□□□ 1.11
SMC2-204ENST00000440179 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
SMC2-204ENST00000440179 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
SMC2-204ENST00000440179 XIRP1Q702N8 1843 aaKnown RBP21.95■■□□□ 1.1
SMC2-204ENST00000440179 LTKP29376 864 aa21.93■■□□□ 1.1
SMC2-204ENST00000440179 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
SMC2-204ENST00000440179 SLIT1O75093 1534 aa21.91■■□□□ 1.1
SMC2-204ENST00000440179 TSPY4P0CV99 314 aa21.91■■□□□ 1.1
SMC2-204ENST00000440179 TSPY10P0CW01 314 aa21.91■■□□□ 1.1
SMC2-204ENST00000440179 POTEAQ6S8J7 498 aa21.9■■□□□ 1.1
SMC2-204ENST00000440179 EIF2AK4Q9P2K8 1649 aaKnown RBP21.9■■□□□ 1.1
SMC2-204ENST00000440179 MAST1Q9Y2H9 1570 aa21.9■■□□□ 1.1
SMC2-204ENST00000440179 CEP152O94986 1710 aa21.89■■□□□ 1.09
SMC2-204ENST00000440179 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.09
SMC2-204ENST00000440179 CFAP65Q6ZU64 1925 aaKnown RBP21.88■■□□□ 1.09
SMC2-204ENST00000440179 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
SMC2-204ENST00000440179 TMEM94Q12767 1356 aa21.82■■□□□ 1.08
SMC2-204ENST00000440179 ARHGAP31Q2M1Z3 1444 aa21.81■■□□□ 1.08
SMC2-204ENST00000440179 MAP3K1Q13233 1512 aa21.8■■□□□ 1.08
SMC2-204ENST00000440179 ROBO1Q9Y6N7 1651 aa21.79■■□□□ 1.08
SMC2-204ENST00000440179 TMEM2Q9UHN6 1383 aa21.79■■□□□ 1.08
SMC2-204ENST00000440179 PIK3C2BO00750 1634 aa21.78■■□□□ 1.08
SMC2-204ENST00000440179 EID1Q9Y6B2 187 aa21.78■■□□□ 1.08
SMC2-204ENST00000440179 PRDM15P57071 1507 aaPredicted RBP21.78■■□□□ 1.08
SMC2-204ENST00000440179 DUOX2Q9NRD8 1548 aa21.78■■□□□ 1.08
SMC2-204ENST00000440179 SETD1AO15047 1707 aaKnown RBP21.76■■□□□ 1.07
SMC2-204ENST00000440179 LRRC9Q6ZRR7 1453 aa21.75■■□□□ 1.07
SMC2-204ENST00000440179 KCNA6P17658 529 aa21.74■■□□□ 1.07
SMC2-204ENST00000440179 TET3O43151 1660 aa21.73■■□□□ 1.07
SMC2-204ENST00000440179 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
SMC2-204ENST00000440179 EFCAB6Q5THR3 1501 aa21.71■■□□□ 1.07
SMC2-204ENST00000440179 KDM5AP29375 1690 aaKnown RBP21.7■■□□□ 1.06
SMC2-204ENST00000440179 PROSER2Q86WR7 435 aaPredicted RBP21.7■■□□□ 1.06
SMC2-204ENST00000440179 CNKSR2Q8WXI2 1034 aa21.7■■□□□ 1.06
SMC2-204ENST00000440179 KIF15Q9NS87 1388 aa21.7■■□□□ 1.06
SMC2-204ENST00000440179 ERBINQ96RT1 1412 aa21.7■■□□□ 1.06
SMC2-204ENST00000440179 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
SMC2-204ENST00000440179 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
SMC2-204ENST00000440179 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
SMC2-204ENST00000440179 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
SMC2-204ENST00000440179 IDI1Q13907 227 aa21.67■■□□□ 1.06
SMC2-204ENST00000440179 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
SMC2-204ENST00000440179 SRCAPQ6ZRS2 3230 aa21.65■■□□□ 1.06
SMC2-204ENST00000440179 KANK4Q5T7N3 995 aaPredicted RBP21.65■■□□□ 1.06
SMC2-204ENST00000440179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMC2-204ENST00000440179 PHLPP1O60346 1717 aa21.65■■□□□ 1.06
SMC2-204ENST00000440179 JCADQ9P266 1359 aa21.64■■□□□ 1.06
SMC2-204ENST00000440179 ABCC5O15440 1437 aa21.63■■□□□ 1.05
SMC2-204ENST00000440179 RRP7BPQ9NSQ0 103 aa21.63■■□□□ 1.05
SMC2-204ENST00000440179 LMTK2Q8IWU2 1503 aa21.63■■□□□ 1.05
SMC2-204ENST00000440179 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms