RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
GTF3C5-206ENST00000439697 ARHGEF5Q12774 1597 aa18.11■□□□□ 0.49
GTF3C5-206ENST00000439697 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
GTF3C5-206ENST00000439697 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
GTF3C5-206ENST00000439697 PKD2Q13563 968 aa18.1■□□□□ 0.49
GTF3C5-206ENST00000439697 GGT6Q6P531 493 aa18.1■□□□□ 0.49
GTF3C5-206ENST00000439697 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
GTF3C5-206ENST00000439697 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
GTF3C5-206ENST00000439697 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
GTF3C5-206ENST00000439697 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
GTF3C5-206ENST00000439697 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
GTF3C5-206ENST00000439697 MED1Q15648 1581 aaPredicted RBP18.07■□□□□ 0.48
GTF3C5-206ENST00000439697 DHX29Q7Z478 1369 aaKnown RBP18.06■□□□□ 0.48
GTF3C5-206ENST00000439697 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
GTF3C5-206ENST00000439697 APLP2Q06481 763 aa18.01■□□□□ 0.47
GTF3C5-206ENST00000439697 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
GTF3C5-206ENST00000439697 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
GTF3C5-206ENST00000439697 DNMT1P26358 1616 aaKnown RBP17.99■□□□□ 0.47
GTF3C5-206ENST00000439697 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
GTF3C5-206ENST00000439697 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
GTF3C5-206ENST00000439697 TOM1O60784 492 aa17.98■□□□□ 0.47
GTF3C5-206ENST00000439697 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
GTF3C5-206ENST00000439697 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
GTF3C5-206ENST00000439697 SHANK2Q9UPX8 1470 aa17.96■□□□□ 0.47
GTF3C5-206ENST00000439697 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
GTF3C5-206ENST00000439697 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
GTF3C5-206ENST00000439697 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
GTF3C5-206ENST00000439697 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
GTF3C5-206ENST00000439697 CPS1P31327 1500 aa17.94■□□□□ 0.46
GTF3C5-206ENST00000439697 KIF3BO15066 747 aa17.94■□□□□ 0.46
GTF3C5-206ENST00000439697 ABCC5O15440 1437 aa17.94■□□□□ 0.46
GTF3C5-206ENST00000439697 TNRQ92752 1358 aa17.93■□□□□ 0.46
GTF3C5-206ENST00000439697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.92■□□□□ 0.46
GTF3C5-206ENST00000439697 ALKQ9UM73 1620 aa17.92■□□□□ 0.46
GTF3C5-206ENST00000439697 POLR1AO95602 1720 aaPredicted RBP17.91■□□□□ 0.46
GTF3C5-206ENST00000439697 VWDEQ8N2E2 1590 aa17.91■□□□□ 0.46
GTF3C5-206ENST00000439697 KDM5DQ9BY66 1539 aa17.9■□□□□ 0.46
GTF3C5-206ENST00000439697 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
GTF3C5-206ENST00000439697 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
GTF3C5-206ENST00000439697 DAPK1P53355 1430 aa17.89■□□□□ 0.46
GTF3C5-206ENST00000439697 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
GTF3C5-206ENST00000439697 ANKLE2Q86XL3 938 aa17.88■□□□□ 0.45
GTF3C5-206ENST00000439697 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
GTF3C5-206ENST00000439697 PZPP20742 1482 aa17.87■□□□□ 0.45
GTF3C5-206ENST00000439697 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
GTF3C5-206ENST00000439697 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
GTF3C5-206ENST00000439697 KIF15Q9NS87 1388 aa17.85■□□□□ 0.45
GTF3C5-206ENST00000439697 WASHC2CQ9Y4E1 1318 aa17.85■□□□□ 0.45
GTF3C5-206ENST00000439697 ABCC3O15438 1527 aa17.83■□□□□ 0.45
GTF3C5-206ENST00000439697 ERBINQ96RT1 1412 aa17.83■□□□□ 0.45
GTF3C5-206ENST00000439697 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
GTF3C5-206ENST00000439697 UGGT1Q9NYU2 1555 aa17.82■□□□□ 0.44
GTF3C5-206ENST00000439697 ZC3H13Q5T200 1668 aaKnown RBP17.81■□□□□ 0.44
GTF3C5-206ENST00000439697 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
GTF3C5-206ENST00000439697 RGS17Q9UGC6 210 aaPredicted RBP17.8■□□□□ 0.44
GTF3C5-206ENST00000439697 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
GTF3C5-206ENST00000439697 MED14O60244 1454 aa17.8■□□□□ 0.44
GTF3C5-206ENST00000439697 STRCP1A6NGW2 1772 aa17.79■□□□□ 0.44
GTF3C5-206ENST00000439697 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
GTF3C5-206ENST00000439697 RRP7BPQ9NSQ0 103 aa17.79■□□□□ 0.44
GTF3C5-206ENST00000439697 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
GTF3C5-206ENST00000439697 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
GTF3C5-206ENST00000439697 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
GTF3C5-206ENST00000439697 IQGAP1P46940 1657 aa17.77■□□□□ 0.43
GTF3C5-206ENST00000439697 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
GTF3C5-206ENST00000439697 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
GTF3C5-206ENST00000439697 FAM50AQ14320 339 aaKnown RBP17.73■□□□□ 0.43
GTF3C5-206ENST00000439697 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
GTF3C5-206ENST00000439697 CEP152O94986 1710 aa17.72■□□□□ 0.43
GTF3C5-206ENST00000439697 LMTK2Q8IWU2 1503 aa17.71■□□□□ 0.43
GTF3C5-206ENST00000439697 SYNMO15061 1565 aa17.7■□□□□ 0.42
GTF3C5-206ENST00000439697 POTEAQ6S8J7 498 aa17.68■□□□□ 0.42
GTF3C5-206ENST00000439697 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
GTF3C5-206ENST00000439697 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
GTF3C5-206ENST00000439697 LTKP29376 864 aa17.67■□□□□ 0.42
GTF3C5-206ENST00000439697 KANK1Q14678 1352 aa17.66■□□□□ 0.42
GTF3C5-206ENST00000439697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
GTF3C5-206ENST00000439697 SCAF11Q99590 1463 aaKnown RBP17.64■□□□□ 0.41
GTF3C5-206ENST00000439697 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
GTF3C5-206ENST00000439697 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
GTF3C5-206ENST00000439697 TXNDC2Q86VQ3 553 aa17.62■□□□□ 0.41
GTF3C5-206ENST00000439697 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
GTF3C5-206ENST00000439697 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
GTF3C5-206ENST00000439697 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
GTF3C5-206ENST00000439697 NOS1P29475 1434 aa17.61■□□□□ 0.41
GTF3C5-206ENST00000439697 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
GTF3C5-206ENST00000439697 CFAP65Q6ZU64 1925 aaKnown RBP17.59■□□□□ 0.41
GTF3C5-206ENST00000439697 UNC13BO14795 1591 aa17.59■□□□□ 0.41
GTF3C5-206ENST00000439697 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.41
GTF3C5-206ENST00000439697 SLIT1O75093 1534 aa17.57■□□□□ 0.4
GTF3C5-206ENST00000439697 RPRD2Q5VT52 1461 aaKnown RBP17.57■□□□□ 0.4
GTF3C5-206ENST00000439697 FAM135BQ49AJ0 1406 aa17.57■□□□□ 0.4
GTF3C5-206ENST00000439697 TMEM94Q12767 1356 aa17.57■□□□□ 0.4
GTF3C5-206ENST00000439697 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
GTF3C5-206ENST00000439697 TET3O43151 1660 aa17.55■□□□□ 0.4
GTF3C5-206ENST00000439697 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
GTF3C5-206ENST00000439697 PIK3C2BO00750 1634 aa17.54■□□□□ 0.4
GTF3C5-206ENST00000439697 IDI1Q13907 227 aa17.54■□□□□ 0.4
GTF3C5-206ENST00000439697 EID1Q9Y6B2 187 aa17.54■□□□□ 0.4
GTF3C5-206ENST00000439697 ROBO1Q9Y6N7 1651 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms