RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
GTF3C5-206ENST00000439697 ABCC9O60706 1549 aa25.97■■□□□ 1.75
GTF3C5-206ENST00000439697 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
GTF3C5-206ENST00000439697 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
GTF3C5-206ENST00000439697 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
GTF3C5-206ENST00000439697 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
GTF3C5-206ENST00000439697 NACADO15069 1562 aa24.08■■□□□ 1.44
GTF3C5-206ENST00000439697 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
GTF3C5-206ENST00000439697 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
GTF3C5-206ENST00000439697 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
GTF3C5-206ENST00000439697 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
GTF3C5-206ENST00000439697 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
GTF3C5-206ENST00000439697 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
GTF3C5-206ENST00000439697 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.34
GTF3C5-206ENST00000439697 CC2D2AQ9P2K1 1620 aa23.36■■□□□ 1.33
GTF3C5-206ENST00000439697 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
GTF3C5-206ENST00000439697 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
GTF3C5-206ENST00000439697 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
GTF3C5-206ENST00000439697 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
GTF3C5-206ENST00000439697 CUX2O14529 1486 aa22.45■■□□□ 1.18
GTF3C5-206ENST00000439697 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
GTF3C5-206ENST00000439697 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
GTF3C5-206ENST00000439697 NESP48681 1621 aa22.19■■□□□ 1.14
GTF3C5-206ENST00000439697 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
GTF3C5-206ENST00000439697 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
GTF3C5-206ENST00000439697 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
GTF3C5-206ENST00000439697 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
GTF3C5-206ENST00000439697 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
GTF3C5-206ENST00000439697 THOC2Q8NI27 1593 aaKnown RBP21.97■■□□□ 1.11
GTF3C5-206ENST00000439697 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
GTF3C5-206ENST00000439697 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
GTF3C5-206ENST00000439697 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
GTF3C5-206ENST00000439697 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
GTF3C5-206ENST00000439697 LAMC3Q9Y6N6 1575 aa21.81■■□□□ 1.08
GTF3C5-206ENST00000439697 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
GTF3C5-206ENST00000439697 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
GTF3C5-206ENST00000439697 WIZO95785 1651 aa21.63■■□□□ 1.05
GTF3C5-206ENST00000439697 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
GTF3C5-206ENST00000439697 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
GTF3C5-206ENST00000439697 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
GTF3C5-206ENST00000439697 WDR62O43379 1518 aa21.55■■□□□ 1.04
GTF3C5-206ENST00000439697 CEP164Q9UPV0 1460 aa21.42■■□□□ 1.02
GTF3C5-206ENST00000439697 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
GTF3C5-206ENST00000439697 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
GTF3C5-206ENST00000439697 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
GTF3C5-206ENST00000439697 CFTRP13569 1480 aa21.28■■□□□ 1
GTF3C5-206ENST00000439697 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
GTF3C5-206ENST00000439697 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
GTF3C5-206ENST00000439697 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
GTF3C5-206ENST00000439697 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
GTF3C5-206ENST00000439697 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
GTF3C5-206ENST00000439697 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
GTF3C5-206ENST00000439697 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
GTF3C5-206ENST00000439697 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
GTF3C5-206ENST00000439697 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
GTF3C5-206ENST00000439697 IFT140Q96RY7 1462 aa21■□□□□ 0.95
GTF3C5-206ENST00000439697 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
GTF3C5-206ENST00000439697 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
GTF3C5-206ENST00000439697 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.94
GTF3C5-206ENST00000439697 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
GTF3C5-206ENST00000439697 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.934e-7■■■■□ 23.6
GTF3C5-206ENST00000439697 FBLN2P98095 1184 aa20.82■□□□□ 0.92
GTF3C5-206ENST00000439697 CHD1O14646 1710 aa20.81■□□□□ 0.92
GTF3C5-206ENST00000439697 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
GTF3C5-206ENST00000439697 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
GTF3C5-206ENST00000439697 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
GTF3C5-206ENST00000439697 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
GTF3C5-206ENST00000439697 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
GTF3C5-206ENST00000439697 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
GTF3C5-206ENST00000439697 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
GTF3C5-206ENST00000439697 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
GTF3C5-206ENST00000439697 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
GTF3C5-206ENST00000439697 CUX1P39880 1505 aa20.58■□□□□ 0.88
GTF3C5-206ENST00000439697 SOGA1O94964 1423 aa20.57■□□□□ 0.88
GTF3C5-206ENST00000439697 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
GTF3C5-206ENST00000439697 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
GTF3C5-206ENST00000439697 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
GTF3C5-206ENST00000439697 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
GTF3C5-206ENST00000439697 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
GTF3C5-206ENST00000439697 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
GTF3C5-206ENST00000439697 GRIN2BQ13224 1484 aa20.42■□□□□ 0.86
GTF3C5-206ENST00000439697 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
GTF3C5-206ENST00000439697 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
GTF3C5-206ENST00000439697 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
GTF3C5-206ENST00000439697 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
GTF3C5-206ENST00000439697 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
GTF3C5-206ENST00000439697 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
GTF3C5-206ENST00000439697 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
GTF3C5-206ENST00000439697 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
GTF3C5-206ENST00000439697 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
GTF3C5-206ENST00000439697 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
GTF3C5-206ENST00000439697 CEP170Q5SW79 1584 aa20.16■□□□□ 0.82
GTF3C5-206ENST00000439697 NUP160Q12769 1436 aa20.11■□□□□ 0.81
GTF3C5-206ENST00000439697 ADAMTS12P58397 1594 aa20.1■□□□□ 0.81
GTF3C5-206ENST00000439697 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
GTF3C5-206ENST00000439697 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
GTF3C5-206ENST00000439697 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
GTF3C5-206ENST00000439697 KIF13AQ9H1H9 1805 aa20.04■□□□□ 0.8
GTF3C5-206ENST00000439697 PRG4Q92954 1404 aaPredicted RBP20■□□□□ 0.79
GTF3C5-206ENST00000439697 FAM69CQ0P6D2 419 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms