RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 POLR1AO95602 1720 aaPredicted RBP23.66■■□□□ 1.38
KCNC4-204ENST00000438661 BCORL1Q5H9F3 1711 aa23.65■■□□□ 1.38
KCNC4-204ENST00000438661 KDM2AQ9Y2K7 1162 aa23.65■■□□□ 1.38
KCNC4-204ENST00000438661 KIAA1107Q9UPP5 1409 aa23.65■■□□□ 1.38
KCNC4-204ENST00000438661 CARD11Q9BXL7 1154 aa23.64■■□□□ 1.38
KCNC4-204ENST00000438661 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.37
KCNC4-204ENST00000438661 POGKQ9P215 609 aa23.64■■□□□ 1.37
KCNC4-204ENST00000438661 TROQ12816 1431 aaPredicted RBP23.63■■□□□ 1.37
KCNC4-204ENST00000438661 KIF15Q9NS87 1388 aa23.63■■□□□ 1.37
KCNC4-204ENST00000438661 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
KCNC4-204ENST00000438661 GPATCH8Q9UKJ3 1502 aaKnown RBP23.62■■□□□ 1.37
KCNC4-204ENST00000438661 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
KCNC4-204ENST00000438661 ST20-MTHFSA0A0A6YYL1 179 aa23.61■■□□□ 1.37
KCNC4-204ENST00000438661 PLB1Q6P1J6 1458 aa23.61■■□□□ 1.37
KCNC4-204ENST00000438661 BRD4O60885 1362 aaPredicted RBP23.6■■□□□ 1.37
KCNC4-204ENST00000438661 RRAGDQ9NQL2 400 aaPredicted RBP23.6■■□□□ 1.37
KCNC4-204ENST00000438661 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
KCNC4-204ENST00000438661 RALBP1Q15311 655 aa23.58■■□□□ 1.37
KCNC4-204ENST00000438661 C8orf34Q49A92 452 aa23.58■■□□□ 1.37
KCNC4-204ENST00000438661 VSIG10Q8N0Z9 540 aa23.58■■□□□ 1.37
KCNC4-204ENST00000438661 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
KCNC4-204ENST00000438661 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
KCNC4-204ENST00000438661 FBLN2P98095 1184 aa23.58■■□□□ 1.36
KCNC4-204ENST00000438661 SLKQ9H2G2 1235 aaPredicted RBP23.57■■□□□ 1.36
KCNC4-204ENST00000438661 KIF14Q15058 1648 aa23.57■■□□□ 1.36
KCNC4-204ENST00000438661 ANKRD30AQ9BXX3 1397 aa23.57■■□□□ 1.36
KCNC4-204ENST00000438661 CC2D1BQ5T0F9 858 aaKnown RBP23.55■■□□□ 1.36
KCNC4-204ENST00000438661 ANKRD50Q9ULJ7 1429 aa23.55■■□□□ 1.36
KCNC4-204ENST00000438661 NUP155O75694 1391 aa23.55■■□□□ 1.36
KCNC4-204ENST00000438661 NAP1L5Q96NT1 182 aaPredicted RBP23.55■■□□□ 1.36
KCNC4-204ENST00000438661 NLRP13Q86W25 1043 aa23.54■■□□□ 1.36
KCNC4-204ENST00000438661 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
KCNC4-204ENST00000438661 KDM5CP41229 1560 aa23.54■■□□□ 1.36
KCNC4-204ENST00000438661 GLIPR1L2Q4G1C9 344 aa23.52■■□□□ 1.36
KCNC4-204ENST00000438661 ADGBQ8N7X0 1667 aa23.52■■□□□ 1.36
KCNC4-204ENST00000438661 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
KCNC4-204ENST00000438661 CENPQQ7L2Z9 268 aaPredicted RBP23.51■■□□□ 1.35
KCNC4-204ENST00000438661 KTN1Q86UP2 1357 aaKnown RBP23.51■■□□□ 1.35
KCNC4-204ENST00000438661 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
KCNC4-204ENST00000438661 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
KCNC4-204ENST00000438661 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
KCNC4-204ENST00000438661 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
KCNC4-204ENST00000438661 ZMYND15Q9H091 742 aa23.47■■□□□ 1.35
KCNC4-204ENST00000438661 PLEKHD1A6NEE1 506 aa23.46■■□□□ 1.35
KCNC4-204ENST00000438661 JPH4Q96JJ6 628 aa23.46■■□□□ 1.35
KCNC4-204ENST00000438661 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
KCNC4-204ENST00000438661 UHRF1BP1Q6BDS2 1440 aa23.45■■□□□ 1.34
KCNC4-204ENST00000438661 CROCC2H7BZ55 1655 aa23.45■■□□□ 1.34
KCNC4-204ENST00000438661 GZF1Q9H116 711 aaPredicted RBP23.44■■□□□ 1.34
KCNC4-204ENST00000438661 RALGAPBQ86X10 1494 aa23.44■■□□□ 1.34
KCNC4-204ENST00000438661 TSPY4P0CV99 314 aa23.44■■□□□ 1.34
KCNC4-204ENST00000438661 TSPY10P0CW01 314 aa23.44■■□□□ 1.34
KCNC4-204ENST00000438661 HNRNPMP52272 730 aaKnown RBP eCLIP23.43■■□□□ 1.34
KCNC4-204ENST00000438661 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
KCNC4-204ENST00000438661 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
KCNC4-204ENST00000438661 SPRYD3Q8NCJ5 442 aa23.41■■□□□ 1.34
KCNC4-204ENST00000438661 PNNQ9H307 717 aaKnown RBP23.4■■□□□ 1.34
KCNC4-204ENST00000438661 ADCY10Q96PN6 1610 aa23.4■■□□□ 1.34
KCNC4-204ENST00000438661 HSP90AA2PQ14568 343 aaPredicted RBP23.4■■□□□ 1.34
KCNC4-204ENST00000438661 CARMIL2Q6F5E8 1435 aa23.38■■□□□ 1.33
KCNC4-204ENST00000438661 SEC24BO95487 1268 aa23.38■■□□□ 1.33
KCNC4-204ENST00000438661 L1TD1Q5T7N2 865 aaKnown RBP23.38■■□□□ 1.33
KCNC4-204ENST00000438661 PANK2Q9BZ23 570 aa23.36■■□□□ 1.33
KCNC4-204ENST00000438661 ADAMTS8Q9UP79 889 aa23.35■■□□□ 1.33
KCNC4-204ENST00000438661 HSP90AA1P07900 732 aaKnown RBP23.35■■□□□ 1.33
KCNC4-204ENST00000438661 CDC42BPAQ5VT25 1732 aa23.35■■□□□ 1.33
KCNC4-204ENST00000438661 RGL3Q3MIN7 710 aa23.34■■□□□ 1.33
KCNC4-204ENST00000438661 ARHGEF12Q9NZN5 1544 aa23.33■■□□□ 1.33
KCNC4-204ENST00000438661 SYNJ2O15056 1496 aa23.33■■□□□ 1.32
KCNC4-204ENST00000438661 ATP10BO94823 1461 aa23.33■■□□□ 1.32
KCNC4-204ENST00000438661 ABCC10Q5T3U5 1492 aa23.32■■□□□ 1.32
KCNC4-204ENST00000438661 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
KCNC4-204ENST00000438661 XRCC6P12956 609 aaKnown RBP eCLIP23.32■■□□□ 1.32
KCNC4-204ENST00000438661 BECN1Q14457 450 aa23.32■■□□□ 1.32
KCNC4-204ENST00000438661 NBPF1Q3BBV0 1214 aa23.31■■□□□ 1.32
KCNC4-204ENST00000438661 PARD3Q8TEW0 1356 aa23.3■■□□□ 1.32
KCNC4-204ENST00000438661 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
KCNC4-204ENST00000438661 GOLGA6L3A6NEY3 463 aa23.3■■□□□ 1.32
KCNC4-204ENST00000438661 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
KCNC4-204ENST00000438661 PER1O15534 1290 aaPredicted RBP23.28■■□□□ 1.32
KCNC4-204ENST00000438661 DUSP27Q5VZP5 1158 aa23.28■■□□□ 1.32
KCNC4-204ENST00000438661 PANK3Q9H999 370 aa23.28■■□□□ 1.32
KCNC4-204ENST00000438661 USP19O94966 1318 aa23.28■■□□□ 1.32
KCNC4-204ENST00000438661 IGHDP01880 384 aa23.27■■□□□ 1.32
KCNC4-204ENST00000438661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.31
KCNC4-204ENST00000438661 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
KCNC4-204ENST00000438661 PTPRGP23470 1445 aa23.25■■□□□ 1.31
KCNC4-204ENST00000438661 BCAR3O75815 825 aa23.25■■□□□ 1.31
KCNC4-204ENST00000438661 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
KCNC4-204ENST00000438661 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
KCNC4-204ENST00000438661 ABCA8O94911 1581 aa23.23■■□□□ 1.31
KCNC4-204ENST00000438661 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
KCNC4-204ENST00000438661 NUP160Q12769 1436 aa23.23■■□□□ 1.31
KCNC4-204ENST00000438661 PLEKHH1Q9ULM0 1364 aa23.22■■□□□ 1.31
KCNC4-204ENST00000438661 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
KCNC4-204ENST00000438661 E9PCH4 1651 aa23.2■■□□□ 1.31
KCNC4-204ENST00000438661 CCDC144AA2RUR9 1427 aa23.2■■□□□ 1.3
KCNC4-204ENST00000438661 FAM135AQ9P2D6 1515 aa23.2■■□□□ 1.3
KCNC4-204ENST00000438661 PRAG1Q86YV5 1406 aa23.2■■□□□ 1.3
KCNC4-204ENST00000438661 CLCN1P35523 988 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms