RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
RPE-211ENST00000438265 DHX29Q7Z478 1369 aaKnown RBP13.16□□□□□ -0.3
RPE-211ENST00000438265 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
RPE-211ENST00000438265 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
RPE-211ENST00000438265 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
RPE-211ENST00000438265 MAST1Q9Y2H9 1570 aa13.15□□□□□ -0.3
RPE-211ENST00000438265 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
RPE-211ENST00000438265 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
RPE-211ENST00000438265 A2ML1A8K2U0 1454 aa13.13□□□□□ -0.31
RPE-211ENST00000438265 PZPP20742 1482 aa13.12□□□□□ -0.31
RPE-211ENST00000438265 KIF3BO15066 747 aa13.12□□□□□ -0.31
RPE-211ENST00000438265 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
RPE-211ENST00000438265 ILDR2Q71H61 639 aa13.11□□□□□ -0.31
RPE-211ENST00000438265 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
RPE-211ENST00000438265 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
RPE-211ENST00000438265 ABCC3O15438 1527 aa13.1□□□□□ -0.31
RPE-211ENST00000438265 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
RPE-211ENST00000438265 ZC3H13Q5T200 1668 aaKnown RBP13.09□□□□□ -0.31
RPE-211ENST00000438265 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
RPE-211ENST00000438265 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
RPE-211ENST00000438265 XIRP1Q702N8 1843 aaKnown RBP13.09□□□□□ -0.31
RPE-211ENST00000438265 SPATA31D1Q6ZQQ2 1576 aa13.08□□□□□ -0.32
RPE-211ENST00000438265 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
RPE-211ENST00000438265 PTPN23Q9H3S7 1636 aa13.08□□□□□ -0.32
RPE-211ENST00000438265 TNRQ92752 1358 aa13.07□□□□□ -0.32
RPE-211ENST00000438265 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
RPE-211ENST00000438265 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
RPE-211ENST00000438265 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
RPE-211ENST00000438265 DEPDC5O75140 1603 aa13.06□□□□□ -0.32
RPE-211ENST00000438265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPE-211ENST00000438265 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
RPE-211ENST00000438265 PPP6R1Q9UPN7 881 aa13.04□□□□□ -0.32
RPE-211ENST00000438265 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
RPE-211ENST00000438265 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
RPE-211ENST00000438265 PKD2Q13563 968 aa13.03□□□□□ -0.32
RPE-211ENST00000438265 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
RPE-211ENST00000438265 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.33
RPE-211ENST00000438265 DISP3Q9P2K9 1392 aa13.02□□□□□ -0.33
RPE-211ENST00000438265 ABCC5O15440 1437 aa13.02□□□□□ -0.33
RPE-211ENST00000438265 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.33
RPE-211ENST00000438265 PIK3C2BO00750 1634 aa13.01□□□□□ -0.33
RPE-211ENST00000438265 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
RPE-211ENST00000438265 NLRP1Q9C000 1473 aa13□□□□□ -0.33
RPE-211ENST00000438265 MED14O60244 1454 aa12.99□□□□□ -0.33
RPE-211ENST00000438265 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
RPE-211ENST00000438265 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
RPE-211ENST00000438265 DAPK1P53355 1430 aa12.97□□□□□ -0.33
RPE-211ENST00000438265 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
RPE-211ENST00000438265 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
RPE-211ENST00000438265 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
RPE-211ENST00000438265 SYNMO15061 1565 aa12.97□□□□□ -0.33
RPE-211ENST00000438265 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.33
RPE-211ENST00000438265 CPS1P31327 1500 aa12.96□□□□□ -0.33
RPE-211ENST00000438265 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.34
RPE-211ENST00000438265 KIF15Q9NS87 1388 aa12.95□□□□□ -0.34
RPE-211ENST00000438265 ARHGAP23Q9P227 1491 aa12.94□□□□□ -0.34
RPE-211ENST00000438265 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
RPE-211ENST00000438265 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
RPE-211ENST00000438265 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
RPE-211ENST00000438265 APLP2Q06481 763 aa12.93□□□□□ -0.34
RPE-211ENST00000438265 SLIT1O75093 1534 aa12.93□□□□□ -0.34
RPE-211ENST00000438265 LTKP29376 864 aa12.92□□□□□ -0.34
RPE-211ENST00000438265 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
RPE-211ENST00000438265 HSPA1LP34931 641 aa12.91□□□□□ -0.34
RPE-211ENST00000438265 ANKLE2Q86XL3 938 aa12.91□□□□□ -0.34
RPE-211ENST00000438265 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
RPE-211ENST00000438265 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
RPE-211ENST00000438265 KDM5AP29375 1690 aaKnown RBP12.9□□□□□ -0.34
RPE-211ENST00000438265 ARHGAP31Q2M1Z3 1444 aa12.9□□□□□ -0.34
RPE-211ENST00000438265 PIP4K2BP78356 416 aa12.9□□□□□ -0.34
RPE-211ENST00000438265 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
RPE-211ENST00000438265 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
RPE-211ENST00000438265 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
RPE-211ENST00000438265 LMTK2Q8IWU2 1503 aa12.89□□□□□ -0.35
RPE-211ENST00000438265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPE-211ENST00000438265 ADGRL2O95490 1459 aa12.88□□□□□ -0.35
RPE-211ENST00000438265 E9PCH4 1651 aa12.87□□□□□ -0.35
RPE-211ENST00000438265 TET3O43151 1660 aa12.87□□□□□ -0.35
RPE-211ENST00000438265 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
RPE-211ENST00000438265 SOCS7O14512 581 aa12.86□□□□□ -0.35
RPE-211ENST00000438265 ADGRB3O60242 1522 aa12.85□□□□□ -0.35
RPE-211ENST00000438265 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
RPE-211ENST00000438265 NOS1P29475 1434 aa12.85□□□□□ -0.35
RPE-211ENST00000438265 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
RPE-211ENST00000438265 UNC13BO14795 1591 aa12.85□□□□□ -0.35
RPE-211ENST00000438265 TMEM131LA2VDJ0 1609 aa12.84□□□□□ -0.35
RPE-211ENST00000438265 IDI1Q13907 227 aa12.83□□□□□ -0.36
RPE-211ENST00000438265 TMEM2Q9UHN6 1383 aa12.82□□□□□ -0.36
RPE-211ENST00000438265 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
RPE-211ENST00000438265 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
RPE-211ENST00000438265 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
RPE-211ENST00000438265 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
RPE-211ENST00000438265 TOM1O60784 492 aa12.8□□□□□ -0.36
RPE-211ENST00000438265 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
RPE-211ENST00000438265 IQGAP3Q86VI3 1631 aa12.79□□□□□ -0.36
RPE-211ENST00000438265 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
RPE-211ENST00000438265 FAM50AQ14320 339 aaKnown RBP12.78□□□□□ -0.36
RPE-211ENST00000438265 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
RPE-211ENST00000438265 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
RPE-211ENST00000438265 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms