RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 SNAPC4Q5SXM2 1469 aa9.03□□□□□ -0.96
CCDC93-203ENST00000437999 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
CCDC93-203ENST00000437999 ZNF687Q8N1G0 1237 aa9.03□□□□□ -0.96
CCDC93-203ENST00000437999 GAPVD1Q14C86 1478 aa9.02□□□□□ -0.96
CCDC93-203ENST00000437999 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.97
CCDC93-203ENST00000437999 PBRM1Q86U86 1689 aa9.01□□□□□ -0.97
CCDC93-203ENST00000437999 MAGI1Q96QZ7 1491 aaPredicted RBP9.01□□□□□ -0.97
CCDC93-203ENST00000437999 C2orf72A6NCS6 295 aa9□□□□□ -0.97
CCDC93-203ENST00000437999 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
CCDC93-203ENST00000437999 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
CCDC93-203ENST00000437999 BCANQ96GW7 911 aa8.99□□□□□ -0.97
CCDC93-203ENST00000437999 SYNJ2O15056 1496 aa8.98□□□□□ -0.97
CCDC93-203ENST00000437999 KIF3CO14782 793 aa8.98□□□□□ -0.97
CCDC93-203ENST00000437999 CRISPLD2Q9H0B8 497 aa8.98□□□□□ -0.97
CCDC93-203ENST00000437999 NCKAP5LQ9HCH0 1330 aa8.98□□□□□ -0.97
CCDC93-203ENST00000437999 ZNF316A6NFI3 1004 aaPredicted RBP8.97□□□□□ -0.97
CCDC93-203ENST00000437999 PDE4AP27815 886 aa8.97□□□□□ -0.97
CCDC93-203ENST00000437999 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
CCDC93-203ENST00000437999 KHSRPQ92945 711 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC93-203ENST00000437999 RIMBP3CA6NJZ7 1639 aa8.97□□□□□ -0.97
CCDC93-203ENST00000437999 RIMBP3BA6NNM3 1639 aa8.97□□□□□ -0.97
CCDC93-203ENST00000437999 RIMBP3Q9UFD9 1639 aa8.97□□□□□ -0.97
CCDC93-203ENST00000437999 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.98
CCDC93-203ENST00000437999 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
CCDC93-203ENST00000437999 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-203ENST00000437999 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
CCDC93-203ENST00000437999 CLASP1Q7Z460 1538 aa8.94□□□□□ -0.98
CCDC93-203ENST00000437999 MFSD10Q14728 455 aa8.93□□□□□ -0.98
CCDC93-203ENST00000437999 TPRNQ4KMQ1 711 aa8.93□□□□□ -0.98
CCDC93-203ENST00000437999 ERICH3Q5RHP9 1530 aa8.93□□□□□ -0.98
CCDC93-203ENST00000437999 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
CCDC93-203ENST00000437999 GRIN2AQ12879 1464 aa8.92□□□□□ -0.98
CCDC93-203ENST00000437999 SLC34A2O95436 690 aa8.92□□□□□ -0.98
CCDC93-203ENST00000437999 RNF166Q96A37 237 aaPredicted RBP8.92□□□□□ -0.98
CCDC93-203ENST00000437999 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
CCDC93-203ENST00000437999 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
CCDC93-203ENST00000437999 NUDT7P0C024 238 aa8.91□□□□□ -0.98
CCDC93-203ENST00000437999 FOXK1P85037 733 aa8.91□□□□□ -0.98
CCDC93-203ENST00000437999 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
CCDC93-203ENST00000437999 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
CCDC93-203ENST00000437999 CYB5RLQ6IPT4 315 aa8.9□□□□□ -0.98
CCDC93-203ENST00000437999 DDX27Q96GQ7 796 aaKnown RBP8.9□□□□□ -0.98
CCDC93-203ENST00000437999 WDR70Q9NW82 654 aa8.9□□□□□ -0.98
CCDC93-203ENST00000437999 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
CCDC93-203ENST00000437999 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
CCDC93-203ENST00000437999 PTGER2P43116 358 aa8.89□□□□□ -0.99
CCDC93-203ENST00000437999 CEP170Q5SW79 1584 aa8.88□□□□□ -0.99
CCDC93-203ENST00000437999 DSG2Q14126 1118 aa8.88□□□□□ -0.99
CCDC93-203ENST00000437999 PPP1R15BQ5SWA1 713 aa8.88□□□□□ -0.99
CCDC93-203ENST00000437999 ARAP1Q96P48 1450 aa8.88□□□□□ -0.99
CCDC93-203ENST00000437999 NUP160Q12769 1436 aa8.88□□□□□ -0.99
CCDC93-203ENST00000437999 IGF1RP08069 1367 aa8.87□□□□□ -0.99
CCDC93-203ENST00000437999 LHX6Q9UPM6 363 aa8.87□□□□□ -0.99
CCDC93-203ENST00000437999 PBX2P40425 430 aa8.85□□□□□ -0.99
CCDC93-203ENST00000437999 LSM11P83369 360 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCDC93-203ENST00000437999 PLPP6Q8IY26 295 aa8.85□□□□□ -0.99
CCDC93-203ENST00000437999 CUL7Q14999 1698 aa8.84□□□□□ -0.99
CCDC93-203ENST00000437999 CAMK2BQ13554 666 aa8.83□□□□□ -1
CCDC93-203ENST00000437999 ARXQ96QS3 562 aa8.83□□□□□ -1
CCDC93-203ENST00000437999 ERCC6L2Q5T890 1561 aa8.82□□□□□ -1
CCDC93-203ENST00000437999 RUSC2Q8N2Y8 1516 aa8.82□□□□□ -1
CCDC93-203ENST00000437999 PSDA5PKW4 1024 aaPredicted RBP8.82□□□□□ -1
CCDC93-203ENST00000437999 TULP1O00294 542 aaPredicted RBP8.82□□□□□ -1
CCDC93-203ENST00000437999 E2F4Q16254 413 aa8.82□□□□□ -1
CCDC93-203ENST00000437999 SHROOM2Q13796 1616 aa8.82□□□□□ -1
CCDC93-203ENST00000437999 CARMIL1Q5VZK9 1371 aa8.82□□□□□ -1
CCDC93-203ENST00000437999 TBC1D12O60347 775 aa8.81□□□□□ -1
CCDC93-203ENST00000437999 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
CCDC93-203ENST00000437999 JPH4Q96JJ6 628 aa8.81□□□□□ -1
CCDC93-203ENST00000437999 P3H3Q8IVL6 736 aa8.8□□□□□ -1
CCDC93-203ENST00000437999 AXIN2Q9Y2T1 843 aa8.8□□□□□ -1
CCDC93-203ENST00000437999 PRG4Q92954 1404 aaPredicted RBP8.79□□□□□ -1
CCDC93-203ENST00000437999 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
CCDC93-203ENST00000437999 KCNV2Q8TDN2 545 aa8.78□□□□□ -1
CCDC93-203ENST00000437999 KIAA0586Q9BVV6 1533 aa8.78□□□□□ -1
CCDC93-203ENST00000437999 ARHGAP33O14559 1287 aa8.77□□□□□ -1.01
CCDC93-203ENST00000437999 EMILIN3Q9NT22 766 aa8.77□□□□□ -1.01
CCDC93-203ENST00000437999 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
CCDC93-203ENST00000437999 ARIH1Q9Y4X5 557 aaPredicted RBP8.76□□□□□ -1.01
CCDC93-203ENST00000437999 RAPGEF2Q9Y4G8 1499 aa8.76□□□□□ -1.01
CCDC93-203ENST00000437999 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
CCDC93-203ENST00000437999 ARHGEF1Q92888 912 aaKnown RBP8.74□□□□□ -1.01
CCDC93-203ENST00000437999 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
CCDC93-203ENST00000437999 IQGAP2Q13576 1575 aa8.71□□□□□ -1.02
CCDC93-203ENST00000437999 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.02
CCDC93-203ENST00000437999 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC93-203ENST00000437999 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
CCDC93-203ENST00000437999 DPYSL4O14531 572 aa8.7□□□□□ -1.02
CCDC93-203ENST00000437999 TK2O00142 265 aa8.69□□□□□ -1.02
CCDC93-203ENST00000437999 MAP3K9P80192 1104 aa8.69□□□□□ -1.02
CCDC93-203ENST00000437999 TTBK1Q5TCY1 1321 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-203ENST00000437999 CARMIL2Q6F5E8 1435 aa8.69□□□□□ -1.02
CCDC93-203ENST00000437999 PSEN2P49810 448 aa8.68□□□□□ -1.02
CCDC93-203ENST00000437999 KCNH8Q96L42 1107 aa8.68□□□□□ -1.02
CCDC93-203ENST00000437999 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
CCDC93-203ENST00000437999 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
CCDC93-203ENST00000437999 PTPRGP23470 1445 aa8.68□□□□□ -1.02
CCDC93-203ENST00000437999 PDIA6Q15084 440 aa8.67□□□□□ -1.02
CCDC93-203ENST00000437999 DMRTA1Q5VZB9 504 aa8.67□□□□□ -1.02
CCDC93-203ENST00000437999 FAM9AQ8IZU1 332 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms