RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
CCDC93-203ENST00000437999 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
CCDC93-203ENST00000437999 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
CCDC93-203ENST00000437999 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CCDC93-203ENST00000437999 FOXD1Q16676 465 aa16.44■□□□□ 0.22
CCDC93-203ENST00000437999 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
CCDC93-203ENST00000437999 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
CCDC93-203ENST00000437999 MSH5O43196 834 aa15.42■□□□□ 0.06
CCDC93-203ENST00000437999 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
CCDC93-203ENST00000437999 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
CCDC93-203ENST00000437999 ADRA2BP18089 450 aa15.32■□□□□ 0.04
CCDC93-203ENST00000437999 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
CCDC93-203ENST00000437999 MAPK8IP2Q13387 824 aaPredicted RBP14.08□□□□□ -0.16
CCDC93-203ENST00000437999 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
CCDC93-203ENST00000437999 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
CCDC93-203ENST00000437999 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
CCDC93-203ENST00000437999 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
CCDC93-203ENST00000437999 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
CCDC93-203ENST00000437999 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
CCDC93-203ENST00000437999 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
CCDC93-203ENST00000437999 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
CCDC93-203ENST00000437999 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
CCDC93-203ENST00000437999 KCNA4P22459 653 aa13.09□□□□□ -0.31
CCDC93-203ENST00000437999 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
CCDC93-203ENST00000437999 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
CCDC93-203ENST00000437999 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
CCDC93-203ENST00000437999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.357e-7■■■□□ 17.2
CCDC93-203ENST00000437999 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
CCDC93-203ENST00000437999 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
CCDC93-203ENST00000437999 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
CCDC93-203ENST00000437999 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
CCDC93-203ENST00000437999 CAPN15O75808 1086 aa12.4□□□□□ -0.42
CCDC93-203ENST00000437999 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
CCDC93-203ENST00000437999 DSG3P32926 999 aa12.3□□□□□ -0.44
CCDC93-203ENST00000437999 APLP2Q06481 763 aa12.28□□□□□ -0.44
CCDC93-203ENST00000437999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
CCDC93-203ENST00000437999 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
CCDC93-203ENST00000437999 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
CCDC93-203ENST00000437999 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
CCDC93-203ENST00000437999 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
CCDC93-203ENST00000437999 POTEHQ6S545 545 aa12.16□□□□□ -0.46
CCDC93-203ENST00000437999 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
CCDC93-203ENST00000437999 ABCB7O75027 752 aa12.08□□□□□ -0.48
CCDC93-203ENST00000437999 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
CCDC93-203ENST00000437999 ZBTB22O15209 634 aa12.05□□□□□ -0.48
CCDC93-203ENST00000437999 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
CCDC93-203ENST00000437999 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CCDC93-203ENST00000437999 POLA2Q14181 598 aa11.87□□□□□ -0.51
CCDC93-203ENST00000437999 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
CCDC93-203ENST00000437999 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
CCDC93-203ENST00000437999 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
CCDC93-203ENST00000437999 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
CCDC93-203ENST00000437999 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
CCDC93-203ENST00000437999 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
CCDC93-203ENST00000437999 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
CCDC93-203ENST00000437999 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
CCDC93-203ENST00000437999 FBLN2P98095 1184 aa11.36□□□□□ -0.59
CCDC93-203ENST00000437999 CCDC180Q9P1Z9 1646 aa11.27□□□□□ -0.6
CCDC93-203ENST00000437999 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
CCDC93-203ENST00000437999 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
CCDC93-203ENST00000437999 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
CCDC93-203ENST00000437999 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
CCDC93-203ENST00000437999 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
CCDC93-203ENST00000437999 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
CCDC93-203ENST00000437999 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC93-203ENST00000437999 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
CCDC93-203ENST00000437999 ABCC9O60706 1549 aa11.13□□□□□ -0.63
CCDC93-203ENST00000437999 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
CCDC93-203ENST00000437999 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
CCDC93-203ENST00000437999 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
CCDC93-203ENST00000437999 HAX1O00165 279 aa11.06□□□□□ -0.64
CCDC93-203ENST00000437999 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
CCDC93-203ENST00000437999 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
CCDC93-203ENST00000437999 PABPN1Q86U42 306 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC93-203ENST00000437999 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
CCDC93-203ENST00000437999 EVX2Q03828 476 aa10.86□□□□□ -0.67
CCDC93-203ENST00000437999 FKBP8Q14318 412 aa10.85□□□□□ -0.67
CCDC93-203ENST00000437999 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
CCDC93-203ENST00000437999 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
CCDC93-203ENST00000437999 C19orf67A6NJJ6 358 aa10.79□□□□□ -0.68
CCDC93-203ENST00000437999 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
CCDC93-203ENST00000437999 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
CCDC93-203ENST00000437999 PROM2Q8N271 834 aa10.67□□□□□ -0.7
CCDC93-203ENST00000437999 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
CCDC93-203ENST00000437999 GABBR2O75899 941 aa10.65□□□□□ -0.7
CCDC93-203ENST00000437999 DCAF8L2P0C7V8 631 aa10.65□□□□□ -0.7
CCDC93-203ENST00000437999 NACADO15069 1562 aa10.62□□□□□ -0.71
CCDC93-203ENST00000437999 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
CCDC93-203ENST00000437999 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
CCDC93-203ENST00000437999 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
CCDC93-203ENST00000437999 CLCN6P51797 869 aa10.53□□□□□ -0.72
CCDC93-203ENST00000437999 ZCCHC6Q5VYS8 1495 aaKnown RBP10.53□□□□□ -0.72
CCDC93-203ENST00000437999 MYO15BQ96JP2 1530 aa10.53□□□□□ -0.72
CCDC93-203ENST00000437999 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
CCDC93-203ENST00000437999 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
CCDC93-203ENST00000437999 DCAF1Q9Y4B6 1507 aa10.46□□□□□ -0.74
CCDC93-203ENST00000437999 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCDC93-203ENST00000437999 UNC13AQ9UPW8 1703 aa10.44□□□□□ -0.74
CCDC93-203ENST00000437999 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
CCDC93-203ENST00000437999 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms