RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 CEP170BQ9Y4F5 1589 aaPredicted RBP21.51■■□□□ 1.03
PTPN7-203ENST00000435759 TCOF1Q13428 1488 aaKnown RBP21.51■■□□□ 1.03
PTPN7-203ENST00000435759 ARHGEF5Q12774 1597 aa21.5■■□□□ 1.03
PTPN7-203ENST00000435759 MYO3AQ8NEV4 1616 aa21.5■■□□□ 1.03
PTPN7-203ENST00000435759 A2ML1A8K2U0 1454 aa21.5■■□□□ 1.03
PTPN7-203ENST00000435759 PLA2R1Q13018 1463 aa21.5■■□□□ 1.03
PTPN7-203ENST00000435759 MIA2Q96PC5 1412 aa21.48■■□□□ 1.03
PTPN7-203ENST00000435759 MAP3K1Q13233 1512 aa21.48■■□□□ 1.03
PTPN7-203ENST00000435759 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
PTPN7-203ENST00000435759 PZPP20742 1482 aa21.47■■□□□ 1.03
PTPN7-203ENST00000435759 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
PTPN7-203ENST00000435759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
PTPN7-203ENST00000435759 DNMT1P26358 1616 aaKnown RBP21.45■■□□□ 1.02
PTPN7-203ENST00000435759 THEMISQ8N1K5 641 aaPredicted RBP21.45■■□□□ 1.02
PTPN7-203ENST00000435759 KDM5DQ9BY66 1539 aa21.45■■□□□ 1.02
PTPN7-203ENST00000435759 UBAP1LF5GYI3 381 aa21.44■■□□□ 1.02
PTPN7-203ENST00000435759 APLP2Q06481 763 aa21.44■■□□□ 1.02
PTPN7-203ENST00000435759 ANKLE2Q86XL3 938 aa21.44■■□□□ 1.02
PTPN7-203ENST00000435759 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
PTPN7-203ENST00000435759 ABCC5O15440 1437 aa21.41■■□□□ 1.02
PTPN7-203ENST00000435759 ILDR2Q71H61 639 aa21.41■■□□□ 1.02
PTPN7-203ENST00000435759 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
PTPN7-203ENST00000435759 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
PTPN7-203ENST00000435759 MAST1Q9Y2H9 1570 aa21.39■■□□□ 1.01
PTPN7-203ENST00000435759 IQSEC2Q5JU85 1478 aa21.39■■□□□ 1.01
PTPN7-203ENST00000435759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
PTPN7-203ENST00000435759 ABCC3O15438 1527 aa21.37■■□□□ 1.01
PTPN7-203ENST00000435759 FAM135AQ9P2D6 1515 aa21.35■■□□□ 1.01
PTPN7-203ENST00000435759 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
PTPN7-203ENST00000435759 NLRP1Q9C000 1473 aa21.34■■□□□ 1.01
PTPN7-203ENST00000435759 NEURL4Q96JN8 1562 aa21.33■■□□□ 1.01
PTPN7-203ENST00000435759 UGGT1Q9NYU2 1555 aa21.32■■□□□ 1
PTPN7-203ENST00000435759 RNF17Q9BXT8 1623 aaKnown RBP21.32■■□□□ 1
PTPN7-203ENST00000435759 DUOX2Q9NRD8 1548 aa21.31■■□□□ 1
PTPN7-203ENST00000435759 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
PTPN7-203ENST00000435759 PIP4K2BP78356 416 aa21.31■■□□□ 1
PTPN7-203ENST00000435759 ERVK-7P63135 1459 aa21.31■■□□□ 1
PTPN7-203ENST00000435759 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
PTPN7-203ENST00000435759 NPHP4O75161 1426 aaPredicted RBP21.3■■□□□ 1
PTPN7-203ENST00000435759 DAPK1P53355 1430 aa21.29■■□□□ 1
PTPN7-203ENST00000435759 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
PTPN7-203ENST00000435759 LTKP29376 864 aa21.29■■□□□ 1
PTPN7-203ENST00000435759 SPATA31D1Q6ZQQ2 1576 aa21.27■■□□□ 1
PTPN7-203ENST00000435759 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
PTPN7-203ENST00000435759 SCAF1Q9H7N4 1312 aaKnown RBP21.27■□□□□ 0.99
PTPN7-203ENST00000435759 MED14O60244 1454 aa21.26■□□□□ 0.99
PTPN7-203ENST00000435759 HSPA1LP34931 641 aa21.26■□□□□ 0.99
PTPN7-203ENST00000435759 FAM50AQ14320 339 aaKnown RBP21.25■□□□□ 0.99
PTPN7-203ENST00000435759 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
PTPN7-203ENST00000435759 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
PTPN7-203ENST00000435759 TOM1O60784 492 aa21.24■□□□□ 0.99
PTPN7-203ENST00000435759 VWDEQ8N2E2 1590 aa21.23■□□□□ 0.99
PTPN7-203ENST00000435759 ERBINQ96RT1 1412 aa21.23■□□□□ 0.99
PTPN7-203ENST00000435759 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
PTPN7-203ENST00000435759 ARHGAP31Q2M1Z3 1444 aa21.22■□□□□ 0.99
PTPN7-203ENST00000435759 CFAP65Q6ZU64 1925 aaKnown RBP21.22■□□□□ 0.99
PTPN7-203ENST00000435759 IDI1Q13907 227 aa21.22■□□□□ 0.99
PTPN7-203ENST00000435759 CPS1P31327 1500 aa21.2■□□□□ 0.98
PTPN7-203ENST00000435759 CEP152O94986 1710 aa21.2■□□□□ 0.98
PTPN7-203ENST00000435759 POLR1AO95602 1720 aaPredicted RBP21.2■□□□□ 0.98
PTPN7-203ENST00000435759 ZC3H13Q5T200 1668 aaKnown RBP21.18■□□□□ 0.98
PTPN7-203ENST00000435759 KANK1Q14678 1352 aa21.18■□□□□ 0.98
PTPN7-203ENST00000435759 DEPDC5O75140 1603 aa21.18■□□□□ 0.98
PTPN7-203ENST00000435759 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
PTPN7-203ENST00000435759 SOCS7O14512 581 aa21.16■□□□□ 0.98
PTPN7-203ENST00000435759 STAG3Q9UJ98 1225 aa21.16■□□□□ 0.98
PTPN7-203ENST00000435759 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
PTPN7-203ENST00000435759 EID1Q9Y6B2 187 aa21.15■□□□□ 0.98
PTPN7-203ENST00000435759 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
PTPN7-203ENST00000435759 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.97
PTPN7-203ENST00000435759 LRRC7Q96NW7 1537 aa21.14■□□□□ 0.97
PTPN7-203ENST00000435759 SCAF11Q99590 1463 aaKnown RBP21.13■□□□□ 0.97
PTPN7-203ENST00000435759 ARHGAP23Q9P227 1491 aa21.13■□□□□ 0.97
PTPN7-203ENST00000435759 UBR1Q8IWV7 1749 aa21.12■□□□□ 0.97
PTPN7-203ENST00000435759 TMEM2Q9UHN6 1383 aa21.12■□□□□ 0.97
PTPN7-203ENST00000435759 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
PTPN7-203ENST00000435759 ALKQ9UM73 1620 aa21.11■□□□□ 0.97
PTPN7-203ENST00000435759 SLIT1O75093 1534 aa21.1■□□□□ 0.97
PTPN7-203ENST00000435759 SLC26A8Q96RN1 970 aa21.1■□□□□ 0.97
PTPN7-203ENST00000435759 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
PTPN7-203ENST00000435759 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
PTPN7-203ENST00000435759 ADGRL2O95490 1459 aa21.08■□□□□ 0.97
PTPN7-203ENST00000435759 RBM33Q96EV2 1170 aaKnown RBP21.08■□□□□ 0.97
PTPN7-203ENST00000435759 NOS1P29475 1434 aa21.07■□□□□ 0.96
PTPN7-203ENST00000435759 ANKRD50Q9ULJ7 1429 aa21.07■□□□□ 0.96
PTPN7-203ENST00000435759 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
PTPN7-203ENST00000435759 PIK3C2BO00750 1634 aa21.06■□□□□ 0.96
PTPN7-203ENST00000435759 ITGAEP38570 1179 aa21.04■□□□□ 0.96
PTPN7-203ENST00000435759 KCNA6P17658 529 aa21.03■□□□□ 0.96
PTPN7-203ENST00000435759 SYNMO15061 1565 aa21.02■□□□□ 0.96
PTPN7-203ENST00000435759 BCANQ96GW7 911 aa21.01■□□□□ 0.95
PTPN7-203ENST00000435759 EFCAB6Q5THR3 1501 aa21■□□□□ 0.95
PTPN7-203ENST00000435759 PROSER2Q86WR7 435 aaPredicted RBP20.99■□□□□ 0.95
PTPN7-203ENST00000435759 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
PTPN7-203ENST00000435759 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
PTPN7-203ENST00000435759 NUTM2DQ5VT03 806 aaPredicted RBP20.97■□□□□ 0.95
PTPN7-203ENST00000435759 TET3O43151 1660 aa20.96■□□□□ 0.95
PTPN7-203ENST00000435759 ROCK1Q13464 1354 aa20.93■□□□□ 0.94
PTPN7-203ENST00000435759 MED1Q15648 1581 aaPredicted RBP20.92■□□□□ 0.94
PTPN7-203ENST00000435759 ADGRB3O60242 1522 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms