RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.76
NEDD4-202ENST00000435532 GORABQ5T7V8 394 aa19.83■□□□□ 0.76
NEDD4-202ENST00000435532 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
NEDD4-202ENST00000435532 PHLDB1Q86UU1 1377 aa19.82■□□□□ 0.76
NEDD4-202ENST00000435532 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
NEDD4-202ENST00000435532 FYCO1Q9BQS8 1478 aa19.82■□□□□ 0.76
NEDD4-202ENST00000435532 TULP1O00294 542 aaPredicted RBP19.81■□□□□ 0.76
NEDD4-202ENST00000435532 CHMP3Q9Y3E7 222 aa19.81■□□□□ 0.76
NEDD4-202ENST00000435532 RGS3P49796 1198 aa19.81■□□□□ 0.76
NEDD4-202ENST00000435532 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
NEDD4-202ENST00000435532 GPATCH3Q96I76 525 aa19.8■□□□□ 0.76
NEDD4-202ENST00000435532 MSH5O43196 834 aa19.77■□□□□ 0.76
NEDD4-202ENST00000435532 TAOK2Q9UL54 1235 aa19.77■□□□□ 0.76
NEDD4-202ENST00000435532 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
NEDD4-202ENST00000435532 KIAA1211Q6ZU35 1233 aa19.77■□□□□ 0.76
NEDD4-202ENST00000435532 THEMISQ8N1K5 641 aaPredicted RBP19.77■□□□□ 0.75
NEDD4-202ENST00000435532 EFCAB5A4FU69 1503 aa19.76■□□□□ 0.75
NEDD4-202ENST00000435532 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
NEDD4-202ENST00000435532 HMMRO75330 724 aa19.76■□□□□ 0.75
NEDD4-202ENST00000435532 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
NEDD4-202ENST00000435532 NLRP13Q86W25 1043 aa19.76■□□□□ 0.75
NEDD4-202ENST00000435532 TTC5Q8N0Z6 440 aa19.76■□□□□ 0.75
NEDD4-202ENST00000435532 ITPRIPQ8IWB1 547 aa19.75■□□□□ 0.75
NEDD4-202ENST00000435532 KIF21BO75037 1637 aa19.74■□□□□ 0.75
NEDD4-202ENST00000435532 HSP90AB1P08238 724 aaKnown RBP19.74■□□□□ 0.75
NEDD4-202ENST00000435532 TEFQ10587 303 aa19.73■□□□□ 0.75
NEDD4-202ENST00000435532 ANKRD50Q9ULJ7 1429 aa19.72■□□□□ 0.75
NEDD4-202ENST00000435532 MIA2Q96PC5 1412 aa19.72■□□□□ 0.75
NEDD4-202ENST00000435532 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
NEDD4-202ENST00000435532 RWDD1Q9H446 243 aaPredicted RBP19.71■□□□□ 0.75
NEDD4-202ENST00000435532 SMC4Q9NTJ3 1288 aa19.71■□□□□ 0.75
NEDD4-202ENST00000435532 ST20-MTHFSA0A0A6YYL1 179 aa19.71■□□□□ 0.75
NEDD4-202ENST00000435532 PROSER2Q86WR7 435 aaPredicted RBP19.7■□□□□ 0.74
NEDD4-202ENST00000435532 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
NEDD4-202ENST00000435532 AFAP1Q8N556 730 aa19.7■□□□□ 0.74
NEDD4-202ENST00000435532 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
NEDD4-202ENST00000435532 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
NEDD4-202ENST00000435532 PANK3Q9H999 370 aa19.69■□□□□ 0.74
NEDD4-202ENST00000435532 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
NEDD4-202ENST00000435532 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
NEDD4-202ENST00000435532 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
NEDD4-202ENST00000435532 APBB1O00213 710 aa19.68■□□□□ 0.74
NEDD4-202ENST00000435532 FRAT2O75474 233 aaPredicted RBP19.68■□□□□ 0.74
NEDD4-202ENST00000435532 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
NEDD4-202ENST00000435532 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
NEDD4-202ENST00000435532 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
NEDD4-202ENST00000435532 DCAF8L1A6NGE4 600 aa19.67■□□□□ 0.74
NEDD4-202ENST00000435532 GNL2Q13823 731 aaKnown RBP19.67■□□□□ 0.74
NEDD4-202ENST00000435532 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
NEDD4-202ENST00000435532 GOLGA6L4A6NEF3 574 aa19.65■□□□□ 0.74
NEDD4-202ENST00000435532 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
NEDD4-202ENST00000435532 RAPGEF4Q8WZA2 1011 aa19.64■□□□□ 0.74
NEDD4-202ENST00000435532 HSCBQ8IWL3 235 aa19.64■□□□□ 0.74
NEDD4-202ENST00000435532 PMFBP1Q8TBY8 1022 aa19.64■□□□□ 0.74
NEDD4-202ENST00000435532 NBR1Q14596 966 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 GOLGA6L6A8MZA4 724 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 CCDC146Q8IYE0 955 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 EHBP1L1Q8N3D4 1523 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 USP47Q96K76 1375 aa19.64■□□□□ 0.73
NEDD4-202ENST00000435532 SYTL4Q96C24 671 aaPredicted RBP19.63■□□□□ 0.73
NEDD4-202ENST00000435532 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
NEDD4-202ENST00000435532 PDE3BQ13370 1112 aa19.62■□□□□ 0.73
NEDD4-202ENST00000435532 TPRNQ4KMQ1 711 aa19.62■□□□□ 0.73
NEDD4-202ENST00000435532 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
NEDD4-202ENST00000435532 DIAPH1O60610 1272 aaKnown RBP19.62■□□□□ 0.73
NEDD4-202ENST00000435532 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
NEDD4-202ENST00000435532 SCAPERQ9BY12 1400 aa19.6■□□□□ 0.73
NEDD4-202ENST00000435532 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
NEDD4-202ENST00000435532 SLC52A1Q9NWF4 448 aa19.59■□□□□ 0.73
NEDD4-202ENST00000435532 WASHC2AQ641Q2 1341 aa19.59■□□□□ 0.73
NEDD4-202ENST00000435532 CLSTN1O94985 981 aa19.59■□□□□ 0.73
NEDD4-202ENST00000435532 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
NEDD4-202ENST00000435532 PTMAP06454 111 aaKnown RBP19.58■□□□□ 0.72
NEDD4-202ENST00000435532 TRIM44Q96DX7 344 aaPredicted RBP19.58■□□□□ 0.72
NEDD4-202ENST00000435532 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
NEDD4-202ENST00000435532 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
NEDD4-202ENST00000435532 C9orf84Q5VXU9 1444 aa19.56■□□□□ 0.72
NEDD4-202ENST00000435532 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
NEDD4-202ENST00000435532 NLRP2Q9NX02 1062 aa19.56■□□□□ 0.72
NEDD4-202ENST00000435532 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
NEDD4-202ENST00000435532 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
NEDD4-202ENST00000435532 NOL10Q9BSC4 688 aaKnown RBP19.54■□□□□ 0.72
NEDD4-202ENST00000435532 NRDCO43847 1150 aa19.53■□□□□ 0.72
NEDD4-202ENST00000435532 HFM1A2PYH4 1435 aa19.53■□□□□ 0.72
NEDD4-202ENST00000435532 NLRP6P59044 892 aa19.53■□□□□ 0.72
NEDD4-202ENST00000435532 TRIM6-TRIM34B2RNG4 842 aa19.52■□□□□ 0.72
NEDD4-202ENST00000435532 RAPGEF3O95398 923 aa19.52■□□□□ 0.72
NEDD4-202ENST00000435532 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
NEDD4-202ENST00000435532 CD109Q6YHK3 1445 aa19.52■□□□□ 0.72
NEDD4-202ENST00000435532 IQGAP2Q13576 1575 aa19.51■□□□□ 0.71
NEDD4-202ENST00000435532 LRRFIP1Q32MZ4 808 aaKnown RBP19.51■□□□□ 0.71
NEDD4-202ENST00000435532 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
NEDD4-202ENST00000435532 HTATSF1O43719 755 aaKnown RBP19.51■□□□□ 0.71
NEDD4-202ENST00000435532 SMG6Q86US8 1419 aaKnown RBP19.5■□□□□ 0.71
NEDD4-202ENST00000435532 CUL7Q14999 1698 aa19.5■□□□□ 0.71
NEDD4-202ENST00000435532 AMOTL1Q8IY63 956 aa19.5■□□□□ 0.71
NEDD4-202ENST00000435532 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms