RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
HLA-DQB2-231ENST00000435145 IQGAP3Q86VI3 1631 aa22.03■■□□□ 1.12
HLA-DQB2-231ENST00000435145 MAGI2Q86UL8 1455 aa22.02■■□□□ 1.11
HLA-DQB2-231ENST00000435145 PRAG1Q86YV5 1406 aa22■■□□□ 1.11
HLA-DQB2-231ENST00000435145 UHRF1BP1LA0JNW5 1464 aa22■■□□□ 1.11
HLA-DQB2-231ENST00000435145 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
HLA-DQB2-231ENST00000435145 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
HLA-DQB2-231ENST00000435145 CLASP1Q7Z460 1538 aa21.99■■□□□ 1.11
HLA-DQB2-231ENST00000435145 CCDC144AA2RUR9 1427 aa21.99■■□□□ 1.11
HLA-DQB2-231ENST00000435145 E9PCH4 1651 aa21.99■■□□□ 1.11
HLA-DQB2-231ENST00000435145 DUOX2Q9NRD8 1548 aa21.99■■□□□ 1.11
HLA-DQB2-231ENST00000435145 ATP10AO60312 1499 aa21.98■■□□□ 1.11
HLA-DQB2-231ENST00000435145 PLCH2O75038 1416 aa21.98■■□□□ 1.11
HLA-DQB2-231ENST00000435145 GPRASP1Q5JY77 1395 aa21.96■■□□□ 1.11
HLA-DQB2-231ENST00000435145 ST20-MTHFSA0A0A6YYL1 179 aa21.96■■□□□ 1.11
HLA-DQB2-231ENST00000435145 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
HLA-DQB2-231ENST00000435145 ERBINQ96RT1 1412 aa21.96■■□□□ 1.11
HLA-DQB2-231ENST00000435145 LAMC1P11047 1609 aa21.96■■□□□ 1.11
HLA-DQB2-231ENST00000435145 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.11
HLA-DQB2-231ENST00000435145 A2MP01023 1474 aa21.94■■□□□ 1.1
HLA-DQB2-231ENST00000435145 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
HLA-DQB2-231ENST00000435145 SMG6Q86US8 1419 aaKnown RBP21.93■■□□□ 1.1
HLA-DQB2-231ENST00000435145 ABCC1P33527 1531 aa21.93■■□□□ 1.1
HLA-DQB2-231ENST00000435145 POLR3GLQ9BT43 218 aa21.92■■□□□ 1.1
HLA-DQB2-231ENST00000435145 IRX6P78412 446 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB2-231ENST00000435145 PNISRQ8TF01 805 aaKnown RBP21.9■■□□□ 1.1
HLA-DQB2-231ENST00000435145 RBM19Q9Y4C8 960 aaKnown RBP21.9■■□□□ 1.1
HLA-DQB2-231ENST00000435145 PPP4R2Q9NY27 417 aa21.89■■□□□ 1.1
HLA-DQB2-231ENST00000435145 PRDM15P57071 1507 aaPredicted RBP21.89■■□□□ 1.09
HLA-DQB2-231ENST00000435145 ARAP3Q8WWN8 1544 aa21.88■■□□□ 1.09
HLA-DQB2-231ENST00000435145 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
HLA-DQB2-231ENST00000435145 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
HLA-DQB2-231ENST00000435145 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
HLA-DQB2-231ENST00000435145 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
HLA-DQB2-231ENST00000435145 RALBP1Q15311 655 aa21.85■■□□□ 1.09
HLA-DQB2-231ENST00000435145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.09
HLA-DQB2-231ENST00000435145 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
HLA-DQB2-231ENST00000435145 MYBBP1AQ9BQG0 1328 aaKnown RBP21.84■■□□□ 1.09
HLA-DQB2-231ENST00000435145 COL17A1Q9UMD9 1497 aaPredicted RBP21.84■■□□□ 1.09
HLA-DQB2-231ENST00000435145 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.09
HLA-DQB2-231ENST00000435145 NBPF1Q3BBV0 1214 aa21.82■■□□□ 1.08
HLA-DQB2-231ENST00000435145 RTEL1-TNFRSF6BF6WH68 1400 aa21.82■■□□□ 1.08
HLA-DQB2-231ENST00000435145 NUDCQ9Y266 331 aa21.82■■□□□ 1.08
HLA-DQB2-231ENST00000435145 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
HLA-DQB2-231ENST00000435145 RNF17Q9BXT8 1623 aaKnown RBP21.81■■□□□ 1.08
HLA-DQB2-231ENST00000435145 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
HLA-DQB2-231ENST00000435145 PARD3Q8TEW0 1356 aa21.8■■□□□ 1.08
HLA-DQB2-231ENST00000435145 TESK2Q96S53 571 aa21.79■■□□□ 1.08
HLA-DQB2-231ENST00000435145 ZFYVE16Q7Z3T8 1539 aa21.78■■□□□ 1.08
HLA-DQB2-231ENST00000435145 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
HLA-DQB2-231ENST00000435145 CNGB1Q14028 1251 aaPredicted RBP21.76■■□□□ 1.07
HLA-DQB2-231ENST00000435145 DEPDC5O75140 1603 aa21.76■■□□□ 1.07
HLA-DQB2-231ENST00000435145 WASHC2CQ9Y4E1 1318 aa21.74■■□□□ 1.07
HLA-DQB2-231ENST00000435145 ANP32EQ9BTT0 268 aa21.74■■□□□ 1.07
HLA-DQB2-231ENST00000435145 TRPM2O94759 1503 aa21.74■■□□□ 1.07
HLA-DQB2-231ENST00000435145 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
HLA-DQB2-231ENST00000435145 PTPRTO14522 1441 aa21.73■■□□□ 1.07
HLA-DQB2-231ENST00000435145 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
HLA-DQB2-231ENST00000435145 NLRP13Q86W25 1043 aa21.72■■□□□ 1.07
HLA-DQB2-231ENST00000435145 ABCA9Q8IUA7 1624 aa21.72■■□□□ 1.07
HLA-DQB2-231ENST00000435145 MADDQ8WXG6 1647 aa21.72■■□□□ 1.07
HLA-DQB2-231ENST00000435145 WDR7Q9Y4E6 1490 aa21.7■■□□□ 1.07
HLA-DQB2-231ENST00000435145 INO80Q9ULG1 1556 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB2-231ENST00000435145 VWDEQ8N2E2 1590 aa21.7■■□□□ 1.06
HLA-DQB2-231ENST00000435145 INSRP06213 1382 aa21.69■■□□□ 1.06
HLA-DQB2-231ENST00000435145 ZMYM4Q5VZL5 1548 aa21.68■■□□□ 1.06
HLA-DQB2-231ENST00000435145 B4GALNT3Q6L9W6 998 aa21.68■■□□□ 1.06
HLA-DQB2-231ENST00000435145 TET3O43151 1660 aa21.68■■□□□ 1.06
HLA-DQB2-231ENST00000435145 CEP152O94986 1710 aa21.68■■□□□ 1.06
HLA-DQB2-231ENST00000435145 SPHKAPQ2M3C7 1700 aa21.68■■□□□ 1.06
HLA-DQB2-231ENST00000435145 IQGAP1P46940 1657 aa21.67■■□□□ 1.06
HLA-DQB2-231ENST00000435145 FANCIQ9NVI1 1328 aa21.67■■□□□ 1.06
HLA-DQB2-231ENST00000435145 AFAP1Q8N556 730 aa21.67■■□□□ 1.06
HLA-DQB2-231ENST00000435145 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
HLA-DQB2-231ENST00000435145 ATP7AQ04656 1500 aa21.66■■□□□ 1.06
HLA-DQB2-231ENST00000435145 CLTCL1P53675 1640 aa21.65■■□□□ 1.06
HLA-DQB2-231ENST00000435145 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
HLA-DQB2-231ENST00000435145 TMF1P82094 1093 aa21.65■■□□□ 1.06
HLA-DQB2-231ENST00000435145 FANCAO15360 1455 aa21.64■■□□□ 1.05
HLA-DQB2-231ENST00000435145 SCAPERQ9BY12 1400 aa21.64■■□□□ 1.05
HLA-DQB2-231ENST00000435145 PANK3Q9H999 370 aa21.61■■□□□ 1.05
HLA-DQB2-231ENST00000435145 MROH1Q8NDA8 1641 aa21.59■■□□□ 1.05
HLA-DQB2-231ENST00000435145 BLMP54132 1417 aaPredicted RBP21.59■■□□□ 1.05
HLA-DQB2-231ENST00000435145 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.05
HLA-DQB2-231ENST00000435145 PDE3BQ13370 1112 aa21.58■■□□□ 1.04
HLA-DQB2-231ENST00000435145 KIAA1210Q9ULL0 1709 aa21.57■■□□□ 1.04
HLA-DQB2-231ENST00000435145 KANK1Q14678 1352 aa21.57■■□□□ 1.04
HLA-DQB2-231ENST00000435145 MSH5O43196 834 aa21.56■■□□□ 1.04
HLA-DQB2-231ENST00000435145 ADGRL1O94910 1474 aa21.56■■□□□ 1.04
HLA-DQB2-231ENST00000435145 SYNMO15061 1565 aa21.54■■□□□ 1.04
HLA-DQB2-231ENST00000435145 SENP3-EIF4A1A0A087X0R7 540 aa21.53■■□□□ 1.04
HLA-DQB2-231ENST00000435145 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
HLA-DQB2-231ENST00000435145 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
HLA-DQB2-231ENST00000435145 MYOM2P54296 1465 aa21.51■■□□□ 1.03
HLA-DQB2-231ENST00000435145 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
HLA-DQB2-231ENST00000435145 EFCAB6Q5THR3 1501 aa21.5■■□□□ 1.03
HLA-DQB2-231ENST00000435145 CDCA8Q53HL2 280 aa21.49■■□□□ 1.03
HLA-DQB2-231ENST00000435145 CCDC136Q96JN2 1154 aa21.49■■□□□ 1.03
HLA-DQB2-231ENST00000435145 LMTK2Q8IWU2 1503 aa21.49■■□□□ 1.03
HLA-DQB2-231ENST00000435145 KIDINS220Q9ULH0 1771 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms