RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 STRCQ7RTU9 1775 aa31.42■■■□□ 2.62
LMBR1-208ENST00000434278 ILDR1Q86SU0 546 aaPredicted RBP31.41■■■□□ 2.62
LMBR1-208ENST00000434278 FAM135AQ9P2D6 1515 aa31.4■■■□□ 2.62
LMBR1-208ENST00000434278 RNF17Q9BXT8 1623 aaKnown RBP31.39■■■□□ 2.62
LMBR1-208ENST00000434278 WASHC2CQ9Y4E1 1318 aa31.39■■■□□ 2.62
LMBR1-208ENST00000434278 EIF2AK4Q9P2K8 1649 aaKnown RBP31.38■■■□□ 2.61
LMBR1-208ENST00000434278 DUOX2Q9NRD8 1548 aa31.38■■■□□ 2.61
LMBR1-208ENST00000434278 MYO3AQ8NEV4 1616 aa31.37■■■□□ 2.61
LMBR1-208ENST00000434278 KIF15Q9NS87 1388 aa31.35■■■□□ 2.61
LMBR1-208ENST00000434278 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
LMBR1-208ENST00000434278 FBXO31Q5XUX0 539 aaPredicted RBP31.33■■■□□ 2.61
LMBR1-208ENST00000434278 PZPP20742 1482 aa31.33■■■□□ 2.61
LMBR1-208ENST00000434278 MROH1Q8NDA8 1641 aa31.32■■■□□ 2.6
LMBR1-208ENST00000434278 CHIC2Q9UKJ5 165 aa31.31■■■□□ 2.6
LMBR1-208ENST00000434278 ZNF142P52746 1687 aaPredicted RBP31.31■■■□□ 2.6
LMBR1-208ENST00000434278 NCOA1Q15788 1441 aa31.3■■■□□ 2.6
LMBR1-208ENST00000434278 CEP170BQ9Y4F5 1589 aaPredicted RBP31.3■■■□□ 2.6
LMBR1-208ENST00000434278 ABCC3O15438 1527 aa31.29■■■□□ 2.6
LMBR1-208ENST00000434278 CAMSAP1Q5T5Y3 1602 aa31.29■■■□□ 2.6
LMBR1-208ENST00000434278 FAM50AQ14320 339 aaKnown RBP31.29■■■□□ 2.6
LMBR1-208ENST00000434278 DMRT2Q9Y5R5 561 aa31.29■■■□□ 2.6
LMBR1-208ENST00000434278 ERBINQ96RT1 1412 aa31.28■■■□□ 2.6
LMBR1-208ENST00000434278 ZC3H13Q5T200 1668 aaKnown RBP31.26■■■□□ 2.6
LMBR1-208ENST00000434278 TNRQ92752 1358 aa31.26■■■□□ 2.59
LMBR1-208ENST00000434278 ANKRD30AQ9BXX3 1397 aa31.25■■■□□ 2.59
LMBR1-208ENST00000434278 PPARGC1BQ86YN6 1023 aaKnown RBP31.23■■■□□ 2.59
LMBR1-208ENST00000434278 PTPRTO14522 1441 aa31.23■■■□□ 2.59
LMBR1-208ENST00000434278 A2ML1A8K2U0 1454 aa31.22■■■□□ 2.59
LMBR1-208ENST00000434278 CEP152O94986 1710 aa31.21■■■□□ 2.59
LMBR1-208ENST00000434278 ADGRL2O95490 1459 aa31.2■■■□□ 2.58
LMBR1-208ENST00000434278 PRDM15P57071 1507 aaPredicted RBP31.19■■■□□ 2.58
LMBR1-208ENST00000434278 PLA2R1Q13018 1463 aa31.18■■■□□ 2.58
LMBR1-208ENST00000434278 NCKAP5LQ9HCH0 1330 aa31.18■■■□□ 2.58
LMBR1-208ENST00000434278 DEPDC5O75140 1603 aa31.16■■■□□ 2.58
LMBR1-208ENST00000434278 FBXO41Q8TF61 875 aa31.16■■■□□ 2.58
LMBR1-208ENST00000434278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.14■■■□□ 2.581e-8■■■□□ 15.2
LMBR1-208ENST00000434278 SPATA31D1Q6ZQQ2 1576 aa31.13■■■□□ 2.57
LMBR1-208ENST00000434278 CERKQ8TCT0 537 aa31.13■■■□□ 2.57
LMBR1-208ENST00000434278 ERVK-7P63135 1459 aa31.11■■■□□ 2.57
LMBR1-208ENST00000434278 NLRP1Q9C000 1473 aa31.11■■■□□ 2.57
LMBR1-208ENST00000434278 PKD2Q13563 968 aa31.1■■■□□ 2.57
LMBR1-208ENST00000434278 ARHGAP31Q2M1Z3 1444 aa31.07■■■□□ 2.56
LMBR1-208ENST00000434278 KANK1Q14678 1352 aa31.06■■■□□ 2.56
LMBR1-208ENST00000434278 CFAP65Q6ZU64 1925 aaKnown RBP31.06■■■□□ 2.56
LMBR1-208ENST00000434278 VWDEQ8N2E2 1590 aa31.05■■■□□ 2.56
LMBR1-208ENST00000434278 ANKRD50Q9ULJ7 1429 aa31.05■■■□□ 2.56
LMBR1-208ENST00000434278 UGGT1Q9NYU2 1555 aa31.05■■■□□ 2.56
LMBR1-208ENST00000434278 LMTK2Q8IWU2 1503 aa31.02■■■□□ 2.56
LMBR1-208ENST00000434278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.02■■■□□ 2.564e-7■■■■□ 21.6
LMBR1-208ENST00000434278 LTBP4Q8N2S1 1624 aa31.02■■■□□ 2.56
LMBR1-208ENST00000434278 THEMISQ8N1K5 641 aaPredicted RBP31.01■■■□□ 2.55
LMBR1-208ENST00000434278 ROCK1Q13464 1354 aa30.98■■■□□ 2.55
LMBR1-208ENST00000434278 POLR1AO95602 1720 aaPredicted RBP30.98■■■□□ 2.55
LMBR1-208ENST00000434278 NEURL4Q96JN8 1562 aa30.97■■■□□ 2.55
LMBR1-208ENST00000434278 ITGAEP38570 1179 aa30.97■■■□□ 2.55
LMBR1-208ENST00000434278 ZNF335Q9H4Z2 1342 aaPredicted RBP30.94■■■□□ 2.54
LMBR1-208ENST00000434278 ANKLE2Q86XL3 938 aa30.93■■■□□ 2.54
LMBR1-208ENST00000434278 EFCAB6Q5THR3 1501 aa30.92■■■□□ 2.54
LMBR1-208ENST00000434278 UBR1Q8IWV7 1749 aa30.91■■■□□ 2.54
LMBR1-208ENST00000434278 RRBP1Q9P2E9 1410 aaKnown RBP30.9■■■□□ 2.54
LMBR1-208ENST00000434278 UNC13BO14795 1591 aa30.88■■■□□ 2.53
LMBR1-208ENST00000434278 MED14O60244 1454 aa30.86■■■□□ 2.53
LMBR1-208ENST00000434278 PIK3C2BO00750 1634 aa30.84■■■□□ 2.53
LMBR1-208ENST00000434278 SYNMO15061 1565 aa30.84■■■□□ 2.53
LMBR1-208ENST00000434278 NPHP4O75161 1426 aaPredicted RBP30.84■■■□□ 2.53
LMBR1-208ENST00000434278 NOS1P29475 1434 aa30.84■■■□□ 2.53
LMBR1-208ENST00000434278 TET3O43151 1660 aa30.82■■■□□ 2.52
LMBR1-208ENST00000434278 IDI1Q13907 227 aa30.81■■■□□ 2.52
LMBR1-208ENST00000434278 IQSEC2Q5JU85 1478 aa30.8■■■□□ 2.52
LMBR1-208ENST00000434278 RPRD2Q5VT52 1461 aaKnown RBP30.79■■■□□ 2.52
LMBR1-208ENST00000434278 ARHGAP23Q9P227 1491 aa30.79■■■□□ 2.52
LMBR1-208ENST00000434278 SLIT1O75093 1534 aa30.78■■■□□ 2.52
LMBR1-208ENST00000434278 IQGAP1P46940 1657 aa30.78■■■□□ 2.52
LMBR1-208ENST00000434278 GCC2Q8IWJ2 1684 aa30.77■■■□□ 2.52
LMBR1-208ENST00000434278 LTKP29376 864 aa30.75■■■□□ 2.51
LMBR1-208ENST00000434278 IQGAP3Q86VI3 1631 aa30.75■■■□□ 2.51
LMBR1-208ENST00000434278 SCAF11Q99590 1463 aaKnown RBP30.75■■■□□ 2.51
LMBR1-208ENST00000434278 STAG3Q9UJ98 1225 aa30.74■■■□□ 2.51
LMBR1-208ENST00000434278 KDM5AP29375 1690 aaKnown RBP30.74■■■□□ 2.51
LMBR1-208ENST00000434278 TXNDC2Q86VQ3 553 aa30.73■■■□□ 2.51
LMBR1-208ENST00000434278 NUP155O75694 1391 aa30.73■■■□□ 2.51
LMBR1-208ENST00000434278 TMEM2Q9UHN6 1383 aa30.72■■■□□ 2.51
LMBR1-208ENST00000434278 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
LMBR1-208ENST00000434278 E9PCH4 1651 aa30.71■■■□□ 2.51
LMBR1-208ENST00000434278 ADGRB3O60242 1522 aa30.68■■■□□ 2.5
LMBR1-208ENST00000434278 CPS1P31327 1500 aa30.68■■■□□ 2.5
LMBR1-208ENST00000434278 EID1Q9Y6B2 187 aa30.67■■■□□ 2.5
LMBR1-208ENST00000434278 NAIPQ13075 1403 aa30.65■■■□□ 2.5
LMBR1-208ENST00000434278 STRCP1A6NGW2 1772 aa30.61■■■□□ 2.49
LMBR1-208ENST00000434278 UBAP1LF5GYI3 381 aa30.58■■■□□ 2.49
LMBR1-208ENST00000434278 MYO5BQ9ULV0 1848 aa30.58■■■□□ 2.49
LMBR1-208ENST00000434278 TMEM131LA2VDJ0 1609 aa30.58■■■□□ 2.49
LMBR1-208ENST00000434278 HFM1A2PYH4 1435 aa30.56■■■□□ 2.48
LMBR1-208ENST00000434278 ZFYVE9O95405 1425 aa30.53■■■□□ 2.48
LMBR1-208ENST00000434278 LRRC7Q96NW7 1537 aa30.52■■■□□ 2.48
LMBR1-208ENST00000434278 CHGAP10645 457 aaKnown RBP30.51■■■□□ 2.47
LMBR1-208ENST00000434278 RIMS2Q9UQ26 1411 aa30.49■■■□□ 2.47
LMBR1-208ENST00000434278 SLC26A8Q96RN1 970 aa30.48■■■□□ 2.47
LMBR1-208ENST00000434278 SPHKAPQ2M3C7 1700 aa30.47■■■□□ 2.47
LMBR1-208ENST00000434278 SENP3Q9H4L4 574 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms