RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 DAPK1P53355 1430 aa9.66□□□□□ -0.86
SYNPO2-203ENST00000434046 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
SYNPO2-203ENST00000434046 ANKRD50Q9ULJ7 1429 aa9.66□□□□□ -0.86
SYNPO2-203ENST00000434046 MS4A1P11836 297 aa9.65□□□□□ -0.86
SYNPO2-203ENST00000434046 WASHC2CQ9Y4E1 1318 aa9.65□□□□□ -0.86
SYNPO2-203ENST00000434046 KIF15Q9NS87 1388 aa9.65□□□□□ -0.87
SYNPO2-203ENST00000434046 SPAG9O60271 1321 aaKnown RBP9.64□□□□□ -0.87
SYNPO2-203ENST00000434046 SLKQ9H2G2 1235 aaPredicted RBP9.64□□□□□ -0.87
SYNPO2-203ENST00000434046 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
SYNPO2-203ENST00000434046 CLASP1Q7Z460 1538 aa9.63□□□□□ -0.87
SYNPO2-203ENST00000434046 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
SYNPO2-203ENST00000434046 NBPF8Q3BBV2 869 aa9.63□□□□□ -0.87
SYNPO2-203ENST00000434046 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
SYNPO2-203ENST00000434046 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
SYNPO2-203ENST00000434046 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
SYNPO2-203ENST00000434046 ABCC5O15440 1437 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 CEP170Q5SW79 1584 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 NUP153P49790 1475 aaKnown RBP9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 GZF1Q9H116 711 aaPredicted RBP9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 KANK1Q14678 1352 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 KIF3BO15066 747 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 ROCK1Q13464 1354 aa9.61□□□□□ -0.87
SYNPO2-203ENST00000434046 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 ROCK2O75116 1388 aaKnown RBP9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 C9orf84Q5VXU9 1444 aa9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 HSP90AA1P07900 732 aaKnown RBP9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 HSP90AA2PQ14568 343 aaPredicted RBP9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 SPRYD3Q8NCJ5 442 aa9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 PNISRQ8TF01 805 aaKnown RBP9.6□□□□□ -0.87
SYNPO2-203ENST00000434046 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 KIAA0556O60303 1618 aa9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 CANXP27824 592 aaKnown RBP9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 ESF1Q9H501 851 aaKnown RBP9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 CCDC144AA2RUR9 1427 aa9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 RAPGEF6Q8TEU7 1601 aa9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 BECN1Q14457 450 aa9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 GGT6Q6P531 493 aa9.59□□□□□ -0.87
SYNPO2-203ENST00000434046 CAMSAP2Q08AD1 1489 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 RIMBP3CA6NJZ7 1639 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 RIMBP3BA6NNM3 1639 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 RIMBP3Q9UFD9 1639 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 ARHGAP5Q13017 1502 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 DISP1Q96F81 1524 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 L1TD1Q5T7N2 865 aaKnown RBP9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 ST20-MTHFSA0A0A6YYL1 179 aa9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
SYNPO2-203ENST00000434046 FAM161AQ3B820 660 aa9.57□□□□□ -0.88
SYNPO2-203ENST00000434046 USP47Q96K76 1375 aa9.57□□□□□ -0.88
SYNPO2-203ENST00000434046 NCOA1Q15788 1441 aa9.57□□□□□ -0.88
SYNPO2-203ENST00000434046 TMF1P82094 1093 aa9.57□□□□□ -0.88
SYNPO2-203ENST00000434046 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.57□□□□□ -0.88
SYNPO2-203ENST00000434046 CDCA8Q53HL2 280 aa9.56□□□□□ -0.88
SYNPO2-203ENST00000434046 UPF2Q9HAU5 1272 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-203ENST00000434046 POGKQ9P215 609 aa9.56□□□□□ -0.88
SYNPO2-203ENST00000434046 GPATCH8Q9UKJ3 1502 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-203ENST00000434046 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
SYNPO2-203ENST00000434046 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
SYNPO2-203ENST00000434046 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
SYNPO2-203ENST00000434046 ATP10BO94823 1461 aa9.55□□□□□ -0.88
SYNPO2-203ENST00000434046 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
SYNPO2-203ENST00000434046 WDR43Q15061 677 aaKnown RBP eCLIP9.55□□□□□ -0.88
SYNPO2-203ENST00000434046 ANKRD30BQ9BXX2 1392 aa9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 MAGI3Q5TCQ9 1506 aa9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 TCOF1Q13428 1488 aaKnown RBP9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 MYBBP1AQ9BQG0 1328 aaKnown RBP9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 TRIM44Q96DX7 344 aaPredicted RBP9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 ZMYND15Q9H091 742 aa9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 KIF14Q15058 1648 aa9.54□□□□□ -0.88
SYNPO2-203ENST00000434046 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
SYNPO2-203ENST00000434046 GOLGA6L3A6NEY3 463 aa9.53□□□□□ -0.88
SYNPO2-203ENST00000434046 RALBP1Q15311 655 aa9.53□□□□□ -0.88
SYNPO2-203ENST00000434046 SHROOM2Q13796 1616 aa9.52□□□□□ -0.89
SYNPO2-203ENST00000434046 CENPQQ7L2Z9 268 aaPredicted RBP9.52□□□□□ -0.89
SYNPO2-203ENST00000434046 C20orf194Q5TEA3 1177 aa9.52□□□□□ -0.89
SYNPO2-203ENST00000434046 NLRP13Q86W25 1043 aa9.52□□□□□ -0.89
SYNPO2-203ENST00000434046 CCDC141Q6ZP82 1450 aa9.5□□□□□ -0.89
SYNPO2-203ENST00000434046 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
SYNPO2-203ENST00000434046 RRAGDQ9NQL2 400 aaPredicted RBP9.5□□□□□ -0.89
SYNPO2-203ENST00000434046 PLEKHH2Q8IVE3 1493 aa9.5□□□□□ -0.89
SYNPO2-203ENST00000434046 ERCC6L2Q5T890 1561 aa9.49□□□□□ -0.89
SYNPO2-203ENST00000434046 RPRD2Q5VT52 1461 aaKnown RBP9.49□□□□□ -0.89
SYNPO2-203ENST00000434046 ARID3AQ99856 593 aa9.48□□□□□ -0.89
SYNPO2-203ENST00000434046 ITSN2Q9NZM3 1697 aa9.47□□□□□ -0.89
SYNPO2-203ENST00000434046 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.89
SYNPO2-203ENST00000434046 MLECQ14165 292 aa9.46□□□□□ -0.89
SYNPO2-203ENST00000434046 MYH16Q9H6N6 1097 aa9.46□□□□□ -0.89
SYNPO2-203ENST00000434046 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
SYNPO2-203ENST00000434046 ANP32BQ92688 251 aaKnown RBP9.45□□□□□ -0.9
SYNPO2-203ENST00000434046 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
SYNPO2-203ENST00000434046 SCAPERQ9BY12 1400 aa9.45□□□□□ -0.9
SYNPO2-203ENST00000434046 PANK3Q9H999 370 aa9.44□□□□□ -0.9
SYNPO2-203ENST00000434046 TRHP20396 242 aaPredicted RBP9.44□□□□□ -0.9
SYNPO2-203ENST00000434046 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
SYNPO2-203ENST00000434046 TNNT2P45379 298 aaPredicted RBP9.44□□□□□ -0.9
SYNPO2-203ENST00000434046 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYNPO2-203ENST00000434046 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms