RNA–Protein interactions for RNA: ENST00000431028.5

GTF3C2-205, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-205ENST00000431028 CFDP1Q9UEE9 299 aaPredicted RBP13.7□□□□□ -0.22
GTF3C2-205ENST00000431028 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
GTF3C2-205ENST00000431028 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
GTF3C2-205ENST00000431028 TNRQ92752 1358 aa13.68□□□□□ -0.22
GTF3C2-205ENST00000431028 CCNB3Q8WWL7 1395 aa13.67□□□□□ -0.22
GTF3C2-205ENST00000431028 FBXO31Q5XUX0 539 aaPredicted RBP13.66□□□□□ -0.22
GTF3C2-205ENST00000431028 ANKLE2Q86XL3 938 aa13.66□□□□□ -0.22
GTF3C2-205ENST00000431028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.22
GTF3C2-205ENST00000431028 PZPP20742 1482 aa13.66□□□□□ -0.22
GTF3C2-205ENST00000431028 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
GTF3C2-205ENST00000431028 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
GTF3C2-205ENST00000431028 NPHP4O75161 1426 aaPredicted RBP13.64□□□□□ -0.23
GTF3C2-205ENST00000431028 MED14O60244 1454 aa13.63□□□□□ -0.23
GTF3C2-205ENST00000431028 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
GTF3C2-205ENST00000431028 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
GTF3C2-205ENST00000431028 ZNF644Q9H582 1327 aaPredicted RBP13.63□□□□□ -0.23
GTF3C2-205ENST00000431028 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
GTF3C2-205ENST00000431028 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
GTF3C2-205ENST00000431028 THEMISQ8N1K5 641 aaPredicted RBP13.62□□□□□ -0.23
GTF3C2-205ENST00000431028 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
GTF3C2-205ENST00000431028 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
GTF3C2-205ENST00000431028 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
GTF3C2-205ENST00000431028 KIF3BO15066 747 aa13.61□□□□□ -0.23
GTF3C2-205ENST00000431028 MIA2Q96PC5 1412 aa13.61□□□□□ -0.23
GTF3C2-205ENST00000431028 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
GTF3C2-205ENST00000431028 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
GTF3C2-205ENST00000431028 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
GTF3C2-205ENST00000431028 STRCP1A6NGW2 1772 aa13.6□□□□□ -0.23
GTF3C2-205ENST00000431028 WASHC2CQ9Y4E1 1318 aa13.6□□□□□ -0.23
GTF3C2-205ENST00000431028 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
GTF3C2-205ENST00000431028 SYNMO15061 1565 aa13.58□□□□□ -0.23
GTF3C2-205ENST00000431028 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
GTF3C2-205ENST00000431028 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
GTF3C2-205ENST00000431028 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
GTF3C2-205ENST00000431028 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
GTF3C2-205ENST00000431028 ZC3H13Q5T200 1668 aaKnown RBP13.52□□□□□ -0.25
GTF3C2-205ENST00000431028 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
GTF3C2-205ENST00000431028 ABCC3O15438 1527 aa13.49□□□□□ -0.25
GTF3C2-205ENST00000431028 ERVK-7P63135 1459 aa13.49□□□□□ -0.25
GTF3C2-205ENST00000431028 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
GTF3C2-205ENST00000431028 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
GTF3C2-205ENST00000431028 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
GTF3C2-205ENST00000431028 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
GTF3C2-205ENST00000431028 UBR1Q8IWV7 1749 aa13.47□□□□□ -0.25
GTF3C2-205ENST00000431028 FAM135BQ49AJ0 1406 aa13.46□□□□□ -0.26
GTF3C2-205ENST00000431028 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
GTF3C2-205ENST00000431028 NCOA2Q15596 1464 aa13.45□□□□□ -0.26
GTF3C2-205ENST00000431028 LTKP29376 864 aa13.45□□□□□ -0.26
GTF3C2-205ENST00000431028 SLIT1O75093 1534 aa13.44□□□□□ -0.26
GTF3C2-205ENST00000431028 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
GTF3C2-205ENST00000431028 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
GTF3C2-205ENST00000431028 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
GTF3C2-205ENST00000431028 MROH1Q8NDA8 1641 aa13.43□□□□□ -0.26
GTF3C2-205ENST00000431028 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
GTF3C2-205ENST00000431028 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
GTF3C2-205ENST00000431028 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
GTF3C2-205ENST00000431028 CEP152O94986 1710 aa13.42□□□□□ -0.26
GTF3C2-205ENST00000431028 CFAP65Q6ZU64 1925 aaKnown RBP13.42□□□□□ -0.26
GTF3C2-205ENST00000431028 ROBO1Q9Y6N7 1651 aa13.41□□□□□ -0.26
GTF3C2-205ENST00000431028 EID1Q9Y6B2 187 aa13.4□□□□□ -0.26
GTF3C2-205ENST00000431028 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
GTF3C2-205ENST00000431028 MAST1Q9Y2H9 1570 aa13.4□□□□□ -0.26
GTF3C2-205ENST00000431028 MAP3K1Q13233 1512 aa13.38□□□□□ -0.27
GTF3C2-205ENST00000431028 TMEM2Q9UHN6 1383 aa13.37□□□□□ -0.27
GTF3C2-205ENST00000431028 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
GTF3C2-205ENST00000431028 PIK3C2BO00750 1634 aa13.36□□□□□ -0.27
GTF3C2-205ENST00000431028 ARHGAP31Q2M1Z3 1444 aa13.36□□□□□ -0.27
GTF3C2-205ENST00000431028 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
GTF3C2-205ENST00000431028 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
GTF3C2-205ENST00000431028 KCNA6P17658 529 aa13.34□□□□□ -0.27
GTF3C2-205ENST00000431028 PROSER2Q86WR7 435 aaPredicted RBP13.34□□□□□ -0.27
GTF3C2-205ENST00000431028 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
GTF3C2-205ENST00000431028 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
GTF3C2-205ENST00000431028 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
GTF3C2-205ENST00000431028 PHLPP1O60346 1717 aa13.33□□□□□ -0.28
GTF3C2-205ENST00000431028 JCADQ9P266 1359 aa13.32□□□□□ -0.28
GTF3C2-205ENST00000431028 NKTRP30414 1462 aaKnown RBP13.32□□□□□ -0.28
GTF3C2-205ENST00000431028 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
GTF3C2-205ENST00000431028 TET3O43151 1660 aa13.31□□□□□ -0.28
GTF3C2-205ENST00000431028 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
GTF3C2-205ENST00000431028 NWD1Q149M9 1564 aa13.31□□□□□ -0.28
GTF3C2-205ENST00000431028 MSH6P52701 1360 aa13.31□□□□□ -0.28
GTF3C2-205ENST00000431028 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
GTF3C2-205ENST00000431028 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
GTF3C2-205ENST00000431028 FOXD1Q16676 465 aa13.29□□□□□ -0.28
GTF3C2-205ENST00000431028 KIF15Q9NS87 1388 aa13.29□□□□□ -0.28
GTF3C2-205ENST00000431028 ERBINQ96RT1 1412 aa13.29□□□□□ -0.28
GTF3C2-205ENST00000431028 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
GTF3C2-205ENST00000431028 IDI1Q13907 227 aa13.28□□□□□ -0.28
GTF3C2-205ENST00000431028 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
GTF3C2-205ENST00000431028 LRP6O75581 1613 aa13.28□□□□□ -0.28
GTF3C2-205ENST00000431028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.293e-8■□□□□ 9.8
GTF3C2-205ENST00000431028 TRIM52Q96A61 297 aa13.26□□□□□ -0.29
GTF3C2-205ENST00000431028 ADGRB3O60242 1522 aa13.25□□□□□ -0.29
GTF3C2-205ENST00000431028 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
GTF3C2-205ENST00000431028 KANK1Q14678 1352 aa13.25□□□□□ -0.29
GTF3C2-205ENST00000431028 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
GTF3C2-205ENST00000431028 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
GTF3C2-205ENST00000431028 ZNF772Q68DY9 489 aaPredicted RBP13.25□□□□□ -0.29
GTF3C2-205ENST00000431028 RRP7BPQ9NSQ0 103 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms