RNA–Protein interactions for RNA: ENST00000431028.5

GTF3C2-205, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-205ENST00000431028 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
GTF3C2-205ENST00000431028 ABCC9O60706 1549 aa19.81■□□□□ 0.76
GTF3C2-205ENST00000431028 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
GTF3C2-205ENST00000431028 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
GTF3C2-205ENST00000431028 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
GTF3C2-205ENST00000431028 NACADO15069 1562 aa18.46■□□□□ 0.55
GTF3C2-205ENST00000431028 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
GTF3C2-205ENST00000431028 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
GTF3C2-205ENST00000431028 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
GTF3C2-205ENST00000431028 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
GTF3C2-205ENST00000431028 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
GTF3C2-205ENST00000431028 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
GTF3C2-205ENST00000431028 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
GTF3C2-205ENST00000431028 SHROOM4Q9ULL8 1493 aa17.87■□□□□ 0.45
GTF3C2-205ENST00000431028 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
GTF3C2-205ENST00000431028 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
GTF3C2-205ENST00000431028 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
GTF3C2-205ENST00000431028 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
GTF3C2-205ENST00000431028 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
GTF3C2-205ENST00000431028 CUX2O14529 1486 aa17.24■□□□□ 0.35
GTF3C2-205ENST00000431028 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
GTF3C2-205ENST00000431028 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
GTF3C2-205ENST00000431028 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
GTF3C2-205ENST00000431028 NESP48681 1621 aa16.92■□□□□ 0.3
GTF3C2-205ENST00000431028 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
GTF3C2-205ENST00000431028 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
GTF3C2-205ENST00000431028 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
GTF3C2-205ENST00000431028 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
GTF3C2-205ENST00000431028 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
GTF3C2-205ENST00000431028 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
GTF3C2-205ENST00000431028 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
GTF3C2-205ENST00000431028 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
GTF3C2-205ENST00000431028 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
GTF3C2-205ENST00000431028 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
GTF3C2-205ENST00000431028 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
GTF3C2-205ENST00000431028 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
GTF3C2-205ENST00000431028 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
GTF3C2-205ENST00000431028 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
GTF3C2-205ENST00000431028 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
GTF3C2-205ENST00000431028 WDR62O43379 1518 aa16.5■□□□□ 0.23
GTF3C2-205ENST00000431028 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
GTF3C2-205ENST00000431028 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
GTF3C2-205ENST00000431028 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
GTF3C2-205ENST00000431028 WIZO95785 1651 aa16.31■□□□□ 0.2
GTF3C2-205ENST00000431028 CFTRP13569 1480 aa16.24■□□□□ 0.19
GTF3C2-205ENST00000431028 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
GTF3C2-205ENST00000431028 RIMBP3CA6NJZ7 1639 aa16.21■□□□□ 0.19
GTF3C2-205ENST00000431028 RIMBP3BA6NNM3 1639 aa16.21■□□□□ 0.19
GTF3C2-205ENST00000431028 RIMBP3Q9UFD9 1639 aa16.21■□□□□ 0.19
GTF3C2-205ENST00000431028 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
GTF3C2-205ENST00000431028 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
GTF3C2-205ENST00000431028 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
GTF3C2-205ENST00000431028 IFT140Q96RY7 1462 aa16.06■□□□□ 0.16
GTF3C2-205ENST00000431028 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
GTF3C2-205ENST00000431028 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
GTF3C2-205ENST00000431028 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
GTF3C2-205ENST00000431028 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
GTF3C2-205ENST00000431028 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
GTF3C2-205ENST00000431028 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
GTF3C2-205ENST00000431028 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
GTF3C2-205ENST00000431028 CHD1O14646 1710 aa15.93■□□□□ 0.14
GTF3C2-205ENST00000431028 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
GTF3C2-205ENST00000431028 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
GTF3C2-205ENST00000431028 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.13
GTF3C2-205ENST00000431028 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
GTF3C2-205ENST00000431028 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
GTF3C2-205ENST00000431028 FBLN2P98095 1184 aa15.85■□□□□ 0.13
GTF3C2-205ENST00000431028 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
GTF3C2-205ENST00000431028 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
GTF3C2-205ENST00000431028 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
GTF3C2-205ENST00000431028 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
GTF3C2-205ENST00000431028 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
GTF3C2-205ENST00000431028 SOGA1O94964 1423 aa15.69■□□□□ 0.1
GTF3C2-205ENST00000431028 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
GTF3C2-205ENST00000431028 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
GTF3C2-205ENST00000431028 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
GTF3C2-205ENST00000431028 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
GTF3C2-205ENST00000431028 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
GTF3C2-205ENST00000431028 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
GTF3C2-205ENST00000431028 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
GTF3C2-205ENST00000431028 GAPVD1Q14C86 1478 aa15.6■□□□□ 0.09
GTF3C2-205ENST00000431028 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
GTF3C2-205ENST00000431028 CUX1P39880 1505 aa15.56■□□□□ 0.08
GTF3C2-205ENST00000431028 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
GTF3C2-205ENST00000431028 ERCC6L2Q5T890 1561 aa15.47■□□□□ 0.07
GTF3C2-205ENST00000431028 ABCA5Q8WWZ7 1642 aa15.45■□□□□ 0.06
GTF3C2-205ENST00000431028 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
GTF3C2-205ENST00000431028 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
GTF3C2-205ENST00000431028 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
GTF3C2-205ENST00000431028 NUP160Q12769 1436 aa15.38■□□□□ 0.05
GTF3C2-205ENST00000431028 KIF13AQ9H1H9 1805 aa15.37■□□□□ 0.05
GTF3C2-205ENST00000431028 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
GTF3C2-205ENST00000431028 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
GTF3C2-205ENST00000431028 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
GTF3C2-205ENST00000431028 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
GTF3C2-205ENST00000431028 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
GTF3C2-205ENST00000431028 FAM69CQ0P6D2 419 aa15.24■□□□□ 0.03
GTF3C2-205ENST00000431028 ABCC10Q5T3U5 1492 aa15.24■□□□□ 0.03
GTF3C2-205ENST00000431028 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
GTF3C2-205ENST00000431028 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms