RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RNF17Q9BXT8 1623 aaKnown RBP27.29■■□□□ 1.96
NUP50-208ENST00000430547 STRCQ7RTU9 1775 aa27.28■■□□□ 1.96
NUP50-208ENST00000430547 DUOX2Q9NRD8 1548 aa27.27■■□□□ 1.96
NUP50-208ENST00000430547 ABCC5O15440 1437 aa27.27■■□□□ 1.96
NUP50-208ENST00000430547 DAPK1P53355 1430 aa27.27■■□□□ 1.96
NUP50-208ENST00000430547 PTPRKQ15262 1439 aa27.27■■□□□ 1.96
NUP50-208ENST00000430547 WASHC2CQ9Y4E1 1318 aa27.27■■□□□ 1.96
NUP50-208ENST00000430547 ZNF142P52746 1687 aaPredicted RBP27.26■■□□□ 1.95
NUP50-208ENST00000430547 ZC3H13Q5T200 1668 aaKnown RBP27.25■■□□□ 1.95
NUP50-208ENST00000430547 KIF15Q9NS87 1388 aa27.22■■□□□ 1.95
NUP50-208ENST00000430547 DMRT2Q9Y5R5 561 aa27.22■■□□□ 1.95
NUP50-208ENST00000430547 CEP170BQ9Y4F5 1589 aaPredicted RBP27.22■■□□□ 1.95
NUP50-208ENST00000430547 PZPP20742 1482 aa27.2■■□□□ 1.95
NUP50-208ENST00000430547 ILDR1Q86SU0 546 aaPredicted RBP27.2■■□□□ 1.94
NUP50-208ENST00000430547 CAMSAP1Q5T5Y3 1602 aa27.19■■□□□ 1.94
NUP50-208ENST00000430547 FAM50AQ14320 339 aaKnown RBP27.18■■□□□ 1.94
NUP50-208ENST00000430547 RRP7BPQ9NSQ0 103 aa27.18■■□□□ 1.94
NUP50-208ENST00000430547 ERBINQ96RT1 1412 aa27.17■■□□□ 1.94
NUP50-208ENST00000430547 CEP152O94986 1710 aa27.17■■□□□ 1.94
NUP50-208ENST00000430547 ANKRD30AQ9BXX3 1397 aa27.16■■□□□ 1.94
NUP50-208ENST00000430547 MROH1Q8NDA8 1641 aa27.16■■□□□ 1.94
NUP50-208ENST00000430547 ABCC3O15438 1527 aa27.16■■□□□ 1.94
NUP50-208ENST00000430547 NCOA1Q15788 1441 aa27.16■■□□□ 1.94
NUP50-208ENST00000430547 TNRQ92752 1358 aa27.14■■□□□ 1.94
NUP50-208ENST00000430547 CHIC2Q9UKJ5 165 aa27.14■■□□□ 1.94
NUP50-208ENST00000430547 FBXO31Q5XUX0 539 aaPredicted RBP27.12■■□□□ 1.93
NUP50-208ENST00000430547 A2ML1A8K2U0 1454 aa27.12■■□□□ 1.93
NUP50-208ENST00000430547 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
NUP50-208ENST00000430547 PTPRTO14522 1441 aa27.1■■□□□ 1.93
NUP50-208ENST00000430547 DEPDC5O75140 1603 aa27.09■■□□□ 1.93
NUP50-208ENST00000430547 CFAP65Q6ZU64 1925 aaKnown RBP27.09■■□□□ 1.93
NUP50-208ENST00000430547 PLA2R1Q13018 1463 aa27.08■■□□□ 1.93
NUP50-208ENST00000430547 ADGRL2O95490 1459 aa27.07■■□□□ 1.92
NUP50-208ENST00000430547 FBXO41Q8TF61 875 aa27.06■■□□□ 1.92
NUP50-208ENST00000430547 KANK1Q14678 1352 aa27.05■■□□□ 1.92
NUP50-208ENST00000430547 NLRP1Q9C000 1473 aa27.04■■□□□ 1.92
NUP50-208ENST00000430547 SPATA31D1Q6ZQQ2 1576 aa27.03■■□□□ 1.92
NUP50-208ENST00000430547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.922e-6■■■□□ 16.3
NUP50-208ENST00000430547 POLR1AO95602 1720 aaPredicted RBP27.02■■□□□ 1.92
NUP50-208ENST00000430547 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
NUP50-208ENST00000430547 NCKAP5LQ9HCH0 1330 aa27.01■■□□□ 1.91
NUP50-208ENST00000430547 PKD2Q13563 968 aa27.01■■□□□ 1.91
NUP50-208ENST00000430547 CERKQ8TCT0 537 aa27.01■■□□□ 1.91
NUP50-208ENST00000430547 ERVK-7P63135 1459 aa27■■□□□ 1.91
NUP50-208ENST00000430547 UGGT1Q9NYU2 1555 aa26.99■■□□□ 1.91
NUP50-208ENST00000430547 ARHGAP31Q2M1Z3 1444 aa26.95■■□□□ 1.9
NUP50-208ENST00000430547 ANKRD50Q9ULJ7 1429 aa26.95■■□□□ 1.9
NUP50-208ENST00000430547 THEMISQ8N1K5 641 aaPredicted RBP26.94■■□□□ 1.9
NUP50-208ENST00000430547 VWDEQ8N2E2 1590 aa26.92■■□□□ 1.9
NUP50-208ENST00000430547 LMTK2Q8IWU2 1503 aa26.91■■□□□ 1.9
NUP50-208ENST00000430547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.91■■□□□ 1.9
NUP50-208ENST00000430547 ITGAEP38570 1179 aa26.89■■□□□ 1.9
NUP50-208ENST00000430547 UBR1Q8IWV7 1749 aa26.88■■□□□ 1.89
NUP50-208ENST00000430547 ROCK1Q13464 1354 aa26.88■■□□□ 1.89
NUP50-208ENST00000430547 LTBP4Q8N2S1 1624 aa26.87■■□□□ 1.89
NUP50-208ENST00000430547 EFCAB6Q5THR3 1501 aa26.87■■□□□ 1.89
NUP50-208ENST00000430547 ANKLE2Q86XL3 938 aa26.87■■□□□ 1.89
NUP50-208ENST00000430547 NEURL4Q96JN8 1562 aa26.87■■□□□ 1.89
NUP50-208ENST00000430547 UNC13BO14795 1591 aa26.84■■□□□ 1.89
NUP50-208ENST00000430547 ZNF335Q9H4Z2 1342 aaPredicted RBP26.82■■□□□ 1.88
NUP50-208ENST00000430547 TET3O43151 1660 aa26.82■■□□□ 1.88
NUP50-208ENST00000430547 PIK3C2BO00750 1634 aa26.81■■□□□ 1.88
NUP50-208ENST00000430547 GCC2Q8IWJ2 1684 aa26.81■■□□□ 1.88
NUP50-208ENST00000430547 IQGAP1P46940 1657 aa26.8■■□□□ 1.88
NUP50-208ENST00000430547 IQSEC2Q5JU85 1478 aa26.79■■□□□ 1.88
NUP50-208ENST00000430547 NPHP4O75161 1426 aaPredicted RBP26.78■■□□□ 1.88
NUP50-208ENST00000430547 RRBP1Q9P2E9 1410 aaKnown RBP26.78■■□□□ 1.88
NUP50-208ENST00000430547 MED14O60244 1454 aa26.77■■□□□ 1.88
NUP50-208ENST00000430547 RPRD2Q5VT52 1461 aaKnown RBP26.77■■□□□ 1.88
NUP50-208ENST00000430547 STAG3Q9UJ98 1225 aa26.77■■□□□ 1.88
NUP50-208ENST00000430547 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
NUP50-208ENST00000430547 SYNMO15061 1565 aa26.76■■□□□ 1.87
NUP50-208ENST00000430547 IQGAP3Q86VI3 1631 aa26.74■■□□□ 1.87
NUP50-208ENST00000430547 NOS1P29475 1434 aa26.73■■□□□ 1.87
NUP50-208ENST00000430547 SLIT1O75093 1534 aa26.72■■□□□ 1.87
NUP50-208ENST00000430547 SCAF11Q99590 1463 aaKnown RBP26.72■■□□□ 1.87
NUP50-208ENST00000430547 ARHGAP23Q9P227 1491 aa26.69■■□□□ 1.86
NUP50-208ENST00000430547 E9PCH4 1651 aa26.69■■□□□ 1.86
NUP50-208ENST00000430547 CPS1P31327 1500 aa26.69■■□□□ 1.86
NUP50-208ENST00000430547 IDI1Q13907 227 aa26.68■■□□□ 1.86
NUP50-208ENST00000430547 EID1Q9Y6B2 187 aa26.68■■□□□ 1.86
NUP50-208ENST00000430547 ADGRB3O60242 1522 aa26.68■■□□□ 1.86
NUP50-208ENST00000430547 SLC52A1Q9NWF4 448 aa26.67■■□□□ 1.86
NUP50-208ENST00000430547 TXNDC2Q86VQ3 553 aa26.66■■□□□ 1.86
NUP50-208ENST00000430547 NUP155O75694 1391 aa26.66■■□□□ 1.86
NUP50-208ENST00000430547 TMEM2Q9UHN6 1383 aa26.64■■□□□ 1.86
NUP50-208ENST00000430547 MYO5BQ9ULV0 1848 aa26.63■■□□□ 1.85
NUP50-208ENST00000430547 LTKP29376 864 aa26.61■■□□□ 1.85
NUP50-208ENST00000430547 STRCP1A6NGW2 1772 aa26.57■■□□□ 1.84
NUP50-208ENST00000430547 UBAP1LF5GYI3 381 aa26.57■■□□□ 1.84
NUP50-208ENST00000430547 NAIPQ13075 1403 aa26.56■■□□□ 1.84
NUP50-208ENST00000430547 TMEM131LA2VDJ0 1609 aa26.55■■□□□ 1.84
NUP50-208ENST00000430547 SPHKAPQ2M3C7 1700 aa26.54■■□□□ 1.84
NUP50-208ENST00000430547 HFM1A2PYH4 1435 aa26.52■■□□□ 1.84
NUP50-208ENST00000430547 CHGAP10645 457 aaKnown RBP26.52■■□□□ 1.84
NUP50-208ENST00000430547 HDGFP51858 240 aaKnown RBP26.49■■□□□ 1.83
NUP50-208ENST00000430547 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
NUP50-208ENST00000430547 BCANQ96GW7 911 aa26.48■■□□□ 1.83
NUP50-208ENST00000430547 RIMS2Q9UQ26 1411 aa26.47■■□□□ 1.83
NUP50-208ENST00000430547 LRRC7Q96NW7 1537 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms