RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 PLEKHH2Q8IVE3 1493 aa18.79■□□□□ 0.6
SYNGAP1-203ENST00000428982 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
SYNGAP1-203ENST00000428982 NFKBIBQ15653 356 aa18.78■□□□□ 0.6
SYNGAP1-203ENST00000428982 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
SYNGAP1-203ENST00000428982 AAMPQ13685 434 aa18.78■□□□□ 0.6
SYNGAP1-203ENST00000428982 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
SYNGAP1-203ENST00000428982 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
SYNGAP1-203ENST00000428982 CNGB1Q14028 1251 aaPredicted RBP18.78■□□□□ 0.6
SYNGAP1-203ENST00000428982 FOXD1Q16676 465 aa18.77■□□□□ 0.6
SYNGAP1-203ENST00000428982 RGL3Q3MIN7 710 aa18.77■□□□□ 0.59
SYNGAP1-203ENST00000428982 TRIM44Q96DX7 344 aaPredicted RBP18.76■□□□□ 0.59
SYNGAP1-203ENST00000428982 KIF3BO15066 747 aa18.76■□□□□ 0.59
SYNGAP1-203ENST00000428982 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
SYNGAP1-203ENST00000428982 GGT6Q6P531 493 aa18.75■□□□□ 0.59
SYNGAP1-203ENST00000428982 DAPK1P53355 1430 aa18.75■□□□□ 0.59
SYNGAP1-203ENST00000428982 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
SYNGAP1-203ENST00000428982 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
SYNGAP1-203ENST00000428982 NAIPQ13075 1403 aa18.73■□□□□ 0.59
SYNGAP1-203ENST00000428982 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
SYNGAP1-203ENST00000428982 ANKRD50Q9ULJ7 1429 aa18.72■□□□□ 0.59
SYNGAP1-203ENST00000428982 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
SYNGAP1-203ENST00000428982 C9orf84Q5VXU9 1444 aa18.71■□□□□ 0.59
SYNGAP1-203ENST00000428982 ABCC2Q92887 1545 aa18.71■□□□□ 0.59
SYNGAP1-203ENST00000428982 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
SYNGAP1-203ENST00000428982 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
SYNGAP1-203ENST00000428982 CDK11BP21127 795 aaKnown RBP18.7■□□□□ 0.58
SYNGAP1-203ENST00000428982 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
SYNGAP1-203ENST00000428982 CANXP27824 592 aaKnown RBP18.69■□□□□ 0.58
SYNGAP1-203ENST00000428982 AFAP1Q8N556 730 aa18.69■□□□□ 0.58
SYNGAP1-203ENST00000428982 GPATCH8Q9UKJ3 1502 aaKnown RBP18.69■□□□□ 0.58
SYNGAP1-203ENST00000428982 CCDC7Q96M83 1385 aa18.68■□□□□ 0.58
SYNGAP1-203ENST00000428982 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
SYNGAP1-203ENST00000428982 AKNAQ7Z591 1439 aa18.67■□□□□ 0.58
SYNGAP1-203ENST00000428982 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
SYNGAP1-203ENST00000428982 ITSN2Q9NZM3 1697 aa18.65■□□□□ 0.58
SYNGAP1-203ENST00000428982 PDE4AP27815 886 aa18.65■□□□□ 0.58
SYNGAP1-203ENST00000428982 ABCC5O15440 1437 aa18.64■□□□□ 0.57
SYNGAP1-203ENST00000428982 CCDC141Q6ZP82 1450 aa18.64■□□□□ 0.57
SYNGAP1-203ENST00000428982 TAF7LQ5H9L4 462 aa18.64■□□□□ 0.57
SYNGAP1-203ENST00000428982 MLECQ14165 292 aa18.64■□□□□ 0.57
SYNGAP1-203ENST00000428982 BBXQ8WY36 941 aaPredicted RBP18.64■□□□□ 0.57
SYNGAP1-203ENST00000428982 DCAF11Q8TEB1 546 aa18.63■□□□□ 0.57
SYNGAP1-203ENST00000428982 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
SYNGAP1-203ENST00000428982 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
SYNGAP1-203ENST00000428982 ABCA8O94911 1581 aa18.62■□□□□ 0.57
SYNGAP1-203ENST00000428982 SCAPERQ9BY12 1400 aa18.61■□□□□ 0.57
SYNGAP1-203ENST00000428982 ANP32BQ92688 251 aaKnown RBP18.61■□□□□ 0.57
SYNGAP1-203ENST00000428982 ASXL2Q76L83 1435 aa18.61■□□□□ 0.57
SYNGAP1-203ENST00000428982 RGS3P49796 1198 aa18.61■□□□□ 0.57
SYNGAP1-203ENST00000428982 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
SYNGAP1-203ENST00000428982 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
SYNGAP1-203ENST00000428982 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
SYNGAP1-203ENST00000428982 ARID3AQ99856 593 aa18.59■□□□□ 0.57
SYNGAP1-203ENST00000428982 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
SYNGAP1-203ENST00000428982 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
SYNGAP1-203ENST00000428982 TCOF1Q13428 1488 aaKnown RBP18.57■□□□□ 0.56
SYNGAP1-203ENST00000428982 GOLGA6L3A6NEY3 463 aa18.57■□□□□ 0.56
SYNGAP1-203ENST00000428982 MAGI3Q5TCQ9 1506 aa18.56■□□□□ 0.56
SYNGAP1-203ENST00000428982 PLCH2O75038 1416 aa18.56■□□□□ 0.56
SYNGAP1-203ENST00000428982 RALBP1Q15311 655 aa18.56■□□□□ 0.56
SYNGAP1-203ENST00000428982 TPM2P07951 284 aa18.55■□□□□ 0.56
SYNGAP1-203ENST00000428982 CCDC144AA2RUR9 1427 aa18.55■□□□□ 0.56
SYNGAP1-203ENST00000428982 FANCAO15360 1455 aa18.54■□□□□ 0.56
SYNGAP1-203ENST00000428982 ADGRL1O94910 1474 aa18.54■□□□□ 0.56
SYNGAP1-203ENST00000428982 NCOA1Q15788 1441 aa18.53■□□□□ 0.56
SYNGAP1-203ENST00000428982 UHRF1BP1LA0JNW5 1464 aa18.53■□□□□ 0.56
SYNGAP1-203ENST00000428982 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
SYNGAP1-203ENST00000428982 FRAT2O75474 233 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-203ENST00000428982 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
SYNGAP1-203ENST00000428982 PTPRKQ15262 1439 aa18.51■□□□□ 0.55
SYNGAP1-203ENST00000428982 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
SYNGAP1-203ENST00000428982 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
SYNGAP1-203ENST00000428982 BECN1Q14457 450 aa18.5■□□□□ 0.55
SYNGAP1-203ENST00000428982 RRAGDQ9NQL2 400 aaPredicted RBP18.5■□□□□ 0.55
SYNGAP1-203ENST00000428982 RAPGEF3O95398 923 aa18.49■□□□□ 0.55
SYNGAP1-203ENST00000428982 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-203ENST00000428982 KTN1Q86UP2 1357 aaKnown RBP18.49■□□□□ 0.55
SYNGAP1-203ENST00000428982 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
SYNGAP1-203ENST00000428982 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
SYNGAP1-203ENST00000428982 USP47Q96K76 1375 aa18.48■□□□□ 0.55
SYNGAP1-203ENST00000428982 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
SYNGAP1-203ENST00000428982 MAP7D2Q96T17 732 aa18.47■□□□□ 0.55
SYNGAP1-203ENST00000428982 FAM13BQ9NYF5 915 aa18.47■□□□□ 0.55
SYNGAP1-203ENST00000428982 KIAA1107Q9UPP5 1409 aa18.47■□□□□ 0.55
SYNGAP1-203ENST00000428982 KDM5BQ9UGL1 1544 aa18.46■□□□□ 0.55
SYNGAP1-203ENST00000428982 MS4A1P11836 297 aa18.46■□□□□ 0.55
SYNGAP1-203ENST00000428982 PAXIP1Q6ZW49 1069 aaPredicted RBP18.46■□□□□ 0.55
SYNGAP1-203ENST00000428982 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
SYNGAP1-203ENST00000428982 SYCP2Q9BX26 1530 aa18.45■□□□□ 0.54
SYNGAP1-203ENST00000428982 SMG6Q86US8 1419 aaKnown RBP18.45■□□□□ 0.54
SYNGAP1-203ENST00000428982 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
SYNGAP1-203ENST00000428982 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
SYNGAP1-203ENST00000428982 CLCN1P35523 988 aa18.44■□□□□ 0.54
SYNGAP1-203ENST00000428982 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
SYNGAP1-203ENST00000428982 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
SYNGAP1-203ENST00000428982 MYBBP1AQ9BQG0 1328 aaKnown RBP18.42■□□□□ 0.54
SYNGAP1-203ENST00000428982 MSNP26038 577 aaKnown RBP18.41■□□□□ 0.54
SYNGAP1-203ENST00000428982 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
SYNGAP1-203ENST00000428982 BACH2Q9BYV9 841 aa18.41■□□□□ 0.54
SYNGAP1-203ENST00000428982 ZHX1Q9UKY1 873 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms