RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.4
ABCA8-202ENST00000428549 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
ABCA8-202ENST00000428549 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
ABCA8-202ENST00000428549 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
ABCA8-202ENST00000428549 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
ABCA8-202ENST00000428549 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
ABCA8-202ENST00000428549 PREX2Q70Z35 1606 aa12.5□□□□□ -0.41
ABCA8-202ENST00000428549 TTC37Q6PGP7 1564 aa12.49□□□□□ -0.41
ABCA8-202ENST00000428549 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
ABCA8-202ENST00000428549 PLCH2O75038 1416 aa12.49□□□□□ -0.41
ABCA8-202ENST00000428549 KDM6BO15054 1643 aa12.48□□□□□ -0.41
ABCA8-202ENST00000428549 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
ABCA8-202ENST00000428549 NEO1Q92859 1461 aa12.48□□□□□ -0.41
ABCA8-202ENST00000428549 FAM50AQ14320 339 aaKnown RBP12.48□□□□□ -0.41
ABCA8-202ENST00000428549 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
ABCA8-202ENST00000428549 MYO5CQ9NQX4 1742 aa12.47□□□□□ -0.41
ABCA8-202ENST00000428549 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
ABCA8-202ENST00000428549 PSMD1Q99460 953 aa12.47□□□□□ -0.41
ABCA8-202ENST00000428549 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
ABCA8-202ENST00000428549 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.41
ABCA8-202ENST00000428549 FANCAO15360 1455 aa12.46□□□□□ -0.41
ABCA8-202ENST00000428549 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
ABCA8-202ENST00000428549 CAMSAP2Q08AD1 1489 aa12.45□□□□□ -0.42
ABCA8-202ENST00000428549 AAMPQ13685 434 aa12.45□□□□□ -0.42
ABCA8-202ENST00000428549 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
ABCA8-202ENST00000428549 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
ABCA8-202ENST00000428549 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
ABCA8-202ENST00000428549 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
ABCA8-202ENST00000428549 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
ABCA8-202ENST00000428549 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
ABCA8-202ENST00000428549 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
ABCA8-202ENST00000428549 ARHGAP5Q13017 1502 aa12.42□□□□□ -0.42
ABCA8-202ENST00000428549 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
ABCA8-202ENST00000428549 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
ABCA8-202ENST00000428549 MTMR7Q9Y216 660 aa12.42□□□□□ -0.42
ABCA8-202ENST00000428549 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
ABCA8-202ENST00000428549 RAPGEF3O95398 923 aa12.41□□□□□ -0.42
ABCA8-202ENST00000428549 RBM25P49756 843 aaKnown RBP12.41□□□□□ -0.42
ABCA8-202ENST00000428549 IRX6P78412 446 aaPredicted RBP12.41□□□□□ -0.42
ABCA8-202ENST00000428549 SAMD9LQ8IVG5 1584 aa12.41□□□□□ -0.42
ABCA8-202ENST00000428549 DAPK1P53355 1430 aa12.4□□□□□ -0.42
ABCA8-202ENST00000428549 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
ABCA8-202ENST00000428549 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
ABCA8-202ENST00000428549 DENND4BO75064 1496 aaPredicted RBP12.4□□□□□ -0.42
ABCA8-202ENST00000428549 SCAPERQ9BY12 1400 aa12.4□□□□□ -0.42
ABCA8-202ENST00000428549 CROCC2H7BZ55 1655 aa12.39□□□□□ -0.43
ABCA8-202ENST00000428549 ADGRL1O94910 1474 aa12.39□□□□□ -0.43
ABCA8-202ENST00000428549 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
ABCA8-202ENST00000428549 CERS3Q8IU89 383 aa12.39□□□□□ -0.43
ABCA8-202ENST00000428549 ZNF428Q96B54 188 aa12.39□□□□□ -0.43
ABCA8-202ENST00000428549 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
ABCA8-202ENST00000428549 SHANK2Q9UPX8 1470 aa12.38□□□□□ -0.43
ABCA8-202ENST00000428549 ABCC5O15440 1437 aa12.38□□□□□ -0.43
ABCA8-202ENST00000428549 PTPRKQ15262 1439 aa12.38□□□□□ -0.43
ABCA8-202ENST00000428549 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
ABCA8-202ENST00000428549 ITGAEP38570 1179 aa12.38□□□□□ -0.43
ABCA8-202ENST00000428549 FAM177A1Q8N128 213 aaPredicted RBP12.38□□□□□ -0.43
ABCA8-202ENST00000428549 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
ABCA8-202ENST00000428549 ROCK1Q13464 1354 aa12.37□□□□□ -0.43
ABCA8-202ENST00000428549 ABCC1P33527 1531 aa12.37□□□□□ -0.43
ABCA8-202ENST00000428549 MBD5Q9P267 1494 aa12.36□□□□□ -0.43
ABCA8-202ENST00000428549 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
ABCA8-202ENST00000428549 CWC22Q9HCG8 908 aaKnown RBP12.36□□□□□ -0.43
ABCA8-202ENST00000428549 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
ABCA8-202ENST00000428549 SETD5Q9C0A6 1442 aa12.36□□□□□ -0.43
ABCA8-202ENST00000428549 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
ABCA8-202ENST00000428549 GCC2Q8IWJ2 1684 aa12.35□□□□□ -0.43
ABCA8-202ENST00000428549 ADGBQ8N7X0 1667 aa12.35□□□□□ -0.43
ABCA8-202ENST00000428549 ADGRL2O95490 1459 aa12.35□□□□□ -0.43
ABCA8-202ENST00000428549 USP35Q9P2H5 1018 aa12.34□□□□□ -0.43
ABCA8-202ENST00000428549 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.43
ABCA8-202ENST00000428549 POGZQ7Z3K3 1410 aa12.33□□□□□ -0.43
ABCA8-202ENST00000428549 AFAP1Q8N556 730 aa12.33□□□□□ -0.43
ABCA8-202ENST00000428549 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
ABCA8-202ENST00000428549 NAIPQ13075 1403 aa12.33□□□□□ -0.44
ABCA8-202ENST00000428549 HNRNPMP52272 730 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABCA8-202ENST00000428549 ZNF518AQ6AHZ1 1483 aa12.32□□□□□ -0.44
ABCA8-202ENST00000428549 TMED8Q6PL24 325 aaPredicted RBP12.32□□□□□ -0.44
ABCA8-202ENST00000428549 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
ABCA8-202ENST00000428549 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
ABCA8-202ENST00000428549 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
ABCA8-202ENST00000428549 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
ABCA8-202ENST00000428549 FOXD4L5Q5VV16 416 aaPredicted RBP12.31□□□□□ -0.44
ABCA8-202ENST00000428549 FOXD4L4Q8WXT5 416 aaPredicted RBP12.31□□□□□ -0.44
ABCA8-202ENST00000428549 MYT1LQ9UL68 1186 aa12.31□□□□□ -0.44
ABCA8-202ENST00000428549 MAGI2Q86UL8 1455 aa12.31□□□□□ -0.44
ABCA8-202ENST00000428549 ARID4BQ4LE39 1312 aaPredicted RBP12.31□□□□□ -0.44
ABCA8-202ENST00000428549 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
ABCA8-202ENST00000428549 ARHGEF12Q9NZN5 1544 aa12.31□□□□□ -0.44
ABCA8-202ENST00000428549 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
ABCA8-202ENST00000428549 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
ABCA8-202ENST00000428549 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
ABCA8-202ENST00000428549 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
ABCA8-202ENST00000428549 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
ABCA8-202ENST00000428549 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
ABCA8-202ENST00000428549 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
ABCA8-202ENST00000428549 ACIN1Q9UKV3 1341 aaKnown RBP12.29□□□□□ -0.44
ABCA8-202ENST00000428549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
ABCA8-202ENST00000428549 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
ABCA8-202ENST00000428549 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms