RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 TNRQ92752 1358 aa19.06■□□□□ 0.64
DDX39B-209ENST00000428450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
DDX39B-209ENST00000428450 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
DDX39B-209ENST00000428450 MED14O60244 1454 aa19.04■□□□□ 0.64
DDX39B-209ENST00000428450 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
DDX39B-209ENST00000428450 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
DDX39B-209ENST00000428450 NPHP4O75161 1426 aaPredicted RBP19.02■□□□□ 0.64
DDX39B-209ENST00000428450 THEMISQ8N1K5 641 aaPredicted RBP19.02■□□□□ 0.64
DDX39B-209ENST00000428450 ADGBQ8N7X0 1667 aa19.01■□□□□ 0.63
DDX39B-209ENST00000428450 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
DDX39B-209ENST00000428450 PZPP20742 1482 aa19■□□□□ 0.63
DDX39B-209ENST00000428450 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
DDX39B-209ENST00000428450 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
DDX39B-209ENST00000428450 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
DDX39B-209ENST00000428450 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
DDX39B-209ENST00000428450 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
DDX39B-209ENST00000428450 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
DDX39B-209ENST00000428450 UGGT1Q9NYU2 1555 aa18.96■□□□□ 0.63
DDX39B-209ENST00000428450 NLRP1Q9C000 1473 aa18.96■□□□□ 0.63
DDX39B-209ENST00000428450 MBD5Q9P267 1494 aa18.96■□□□□ 0.63
DDX39B-209ENST00000428450 RTEL1-TNFRSF6BF6WH68 1400 aa18.95■□□□□ 0.62
DDX39B-209ENST00000428450 KIF3BO15066 747 aa18.95■□□□□ 0.62
DDX39B-209ENST00000428450 POTEAQ6S8J7 498 aa18.95■□□□□ 0.62
DDX39B-209ENST00000428450 FYCO1Q9BQS8 1478 aa18.95■□□□□ 0.62
DDX39B-209ENST00000428450 RNF17Q9BXT8 1623 aaKnown RBP18.94■□□□□ 0.62
DDX39B-209ENST00000428450 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
DDX39B-209ENST00000428450 IQGAP1P46940 1657 aa18.93■□□□□ 0.62
DDX39B-209ENST00000428450 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
DDX39B-209ENST00000428450 WASHC2CQ9Y4E1 1318 aa18.93■□□□□ 0.62
DDX39B-209ENST00000428450 SYNMO15061 1565 aa18.9■□□□□ 0.62
DDX39B-209ENST00000428450 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
DDX39B-209ENST00000428450 ZC3H13Q5T200 1668 aaKnown RBP18.83■□□□□ 0.61
DDX39B-209ENST00000428450 TIAM1Q13009 1591 aa18.83■□□□□ 0.6
DDX39B-209ENST00000428450 MTUS2Q5JR59 1369 aa18.82■□□□□ 0.6
DDX39B-209ENST00000428450 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
DDX39B-209ENST00000428450 LTKP29376 864 aa18.79■□□□□ 0.6
DDX39B-209ENST00000428450 CCDC141Q6ZP82 1450 aa18.78■□□□□ 0.6
DDX39B-209ENST00000428450 SCAF11Q99590 1463 aaKnown RBP18.77■□□□□ 0.59
DDX39B-209ENST00000428450 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
DDX39B-209ENST00000428450 ERVK-7P63135 1459 aa18.76■□□□□ 0.59
DDX39B-209ENST00000428450 NCOA2Q15596 1464 aa18.76■□□□□ 0.59
DDX39B-209ENST00000428450 ABCC3O15438 1527 aa18.74■□□□□ 0.59
DDX39B-209ENST00000428450 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
DDX39B-209ENST00000428450 ARHGAP23Q9P227 1491 aa18.74■□□□□ 0.59
DDX39B-209ENST00000428450 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
DDX39B-209ENST00000428450 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
DDX39B-209ENST00000428450 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
DDX39B-209ENST00000428450 SLIT1O75093 1534 aa18.72■□□□□ 0.59
DDX39B-209ENST00000428450 TMEM94Q12767 1356 aa18.71■□□□□ 0.59
DDX39B-209ENST00000428450 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
DDX39B-209ENST00000428450 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
DDX39B-209ENST00000428450 ROBO1Q9Y6N7 1651 aa18.69■□□□□ 0.58
DDX39B-209ENST00000428450 EHBP1L1Q8N3D4 1523 aa18.69■□□□□ 0.58
DDX39B-209ENST00000428450 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
DDX39B-209ENST00000428450 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX39B-209ENST00000428450 TSPY4P0CV99 314 aa18.68■□□□□ 0.58
DDX39B-209ENST00000428450 TSPY10P0CW01 314 aa18.68■□□□□ 0.58
DDX39B-209ENST00000428450 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
DDX39B-209ENST00000428450 KCNA6P17658 529 aa18.66■□□□□ 0.58
DDX39B-209ENST00000428450 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
DDX39B-209ENST00000428450 CFAP65Q6ZU64 1925 aaKnown RBP18.65■□□□□ 0.58
DDX39B-209ENST00000428450 MROH1Q8NDA8 1641 aa18.65■□□□□ 0.58
DDX39B-209ENST00000428450 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
DDX39B-209ENST00000428450 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.58
DDX39B-209ENST00000428450 JCADQ9P266 1359 aa18.63■□□□□ 0.57
DDX39B-209ENST00000428450 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
DDX39B-209ENST00000428450 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
DDX39B-209ENST00000428450 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
DDX39B-209ENST00000428450 ARHGAP31Q2M1Z3 1444 aa18.6■□□□□ 0.57
DDX39B-209ENST00000428450 SLAIN2Q9P270 581 aa18.6■□□□□ 0.57
DDX39B-209ENST00000428450 CEP152O94986 1710 aa18.6■□□□□ 0.57
DDX39B-209ENST00000428450 EIF2AK4Q9P2K8 1649 aaKnown RBP18.6■□□□□ 0.57
DDX39B-209ENST00000428450 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
DDX39B-209ENST00000428450 TET3O43151 1660 aa18.58■□□□□ 0.57
DDX39B-209ENST00000428450 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
DDX39B-209ENST00000428450 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
DDX39B-209ENST00000428450 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
DDX39B-209ENST00000428450 LRP6O75581 1613 aa18.56■□□□□ 0.56
DDX39B-209ENST00000428450 ZNF772Q68DY9 489 aaPredicted RBP18.56■□□□□ 0.56
DDX39B-209ENST00000428450 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
DDX39B-209ENST00000428450 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
DDX39B-209ENST00000428450 MSH6P52701 1360 aa18.54■□□□□ 0.56
DDX39B-209ENST00000428450 SPATA31A6Q5VVP1 1343 aa18.53■□□□□ 0.56
DDX39B-209ENST00000428450 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
DDX39B-209ENST00000428450 IDI1Q13907 227 aa18.53■□□□□ 0.56
DDX39B-209ENST00000428450 COL16A1Q07092 1604 aaPredicted RBP18.52■□□□□ 0.56
DDX39B-209ENST00000428450 NWD1Q149M9 1564 aa18.52■□□□□ 0.56
DDX39B-209ENST00000428450 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
DDX39B-209ENST00000428450 EFCAB6Q5THR3 1501 aa18.51■□□□□ 0.55
DDX39B-209ENST00000428450 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
DDX39B-209ENST00000428450 RXRBP28702 533 aa18.49■□□□□ 0.55
DDX39B-209ENST00000428450 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
DDX39B-209ENST00000428450 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
DDX39B-209ENST00000428450 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
DDX39B-209ENST00000428450 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.54
DDX39B-209ENST00000428450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.549e-16■□□□□ 10.3
DDX39B-209ENST00000428450 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
DDX39B-209ENST00000428450 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
DDX39B-209ENST00000428450 NCOA3Q9Y6Q9 1424 aa18.41■□□□□ 0.54
DDX39B-209ENST00000428450 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms