RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 PTPRKQ15262 1439 aa34.47■■■■□ 3.11
SDHAP1-204ENST00000427415 FAM135AQ9P2D6 1515 aa34.46■■■■□ 3.11
SDHAP1-204ENST00000427415 PPP6R1Q9UPN7 881 aa34.46■■■■□ 3.11
SDHAP1-204ENST00000427415 CLTCQ00610 1675 aaKnown RBP34.46■■■■□ 3.11
SDHAP1-204ENST00000427415 ITGAEP38570 1179 aa34.44■■■■□ 3.1
SDHAP1-204ENST00000427415 ROCK1Q13464 1354 aa34.44■■■■□ 3.1
SDHAP1-204ENST00000427415 C3P01024 1663 aa34.41■■■■□ 3.1
SDHAP1-204ENST00000427415 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
SDHAP1-204ENST00000427415 ZC3H13Q5T200 1668 aaKnown RBP34.37■■■■□ 3.09
SDHAP1-204ENST00000427415 PLPPR3Q6T4P5 718 aa34.36■■■■□ 3.09
SDHAP1-204ENST00000427415 DEPDC5O75140 1603 aa34.36■■■■□ 3.09
SDHAP1-204ENST00000427415 MROH1Q8NDA8 1641 aa34.36■■■■□ 3.09
SDHAP1-204ENST00000427415 ANKRD50Q9ULJ7 1429 aa34.34■■■■□ 3.09
SDHAP1-204ENST00000427415 PRDM15P57071 1507 aaPredicted RBP34.34■■■■□ 3.09
SDHAP1-204ENST00000427415 SETD1BQ9UPS6 1966 aaKnown RBP34.31■■■■□ 3.08
SDHAP1-204ENST00000427415 ZMYM3Q14202 1370 aa34.3■■■■□ 3.08
SDHAP1-204ENST00000427415 WASHC2CQ9Y4E1 1318 aa34.3■■■■□ 3.08
SDHAP1-204ENST00000427415 CEBPAP49715 358 aaPredicted RBP34.29■■■■□ 3.08
SDHAP1-204ENST00000427415 CEP152O94986 1710 aa34.28■■■■□ 3.08
SDHAP1-204ENST00000427415 ABCC3O15438 1527 aa34.27■■■■□ 3.08
SDHAP1-204ENST00000427415 GCC2Q8IWJ2 1684 aa34.24■■■■□ 3.07
SDHAP1-204ENST00000427415 PREX1Q8TCU6 1659 aa34.24■■■■□ 3.07
SDHAP1-204ENST00000427415 KANK1Q14678 1352 aa34.23■■■■□ 3.07
SDHAP1-204ENST00000427415 NPATQ14207 1427 aa34.21■■■■□ 3.07
SDHAP1-204ENST00000427415 CAMSAP1Q5T5Y3 1602 aa34.21■■■■□ 3.07
SDHAP1-204ENST00000427415 PZPP20742 1482 aa34.19■■■■□ 3.06
SDHAP1-204ENST00000427415 UNC13BO14795 1591 aa34.19■■■■□ 3.06
SDHAP1-204ENST00000427415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.18■■■■□ 3.06
SDHAP1-204ENST00000427415 VWDEQ8N2E2 1590 aa34.18■■■■□ 3.06
SDHAP1-204ENST00000427415 LMTK3Q96Q04 1460 aa34.14■■■■□ 3.06
SDHAP1-204ENST00000427415 HFM1A2PYH4 1435 aa34.13■■■■□ 3.05
SDHAP1-204ENST00000427415 NAIPQ13075 1403 aa34.13■■■■□ 3.05
SDHAP1-204ENST00000427415 LMTK2Q8IWU2 1503 aa34.13■■■■□ 3.05
SDHAP1-204ENST00000427415 UHRF1BP1Q6BDS2 1440 aa34.12■■■■□ 3.05
SDHAP1-204ENST00000427415 CFAP65Q6ZU64 1925 aaKnown RBP34.08■■■■□ 3.05
SDHAP1-204ENST00000427415 MYO3AQ8NEV4 1616 aa34.08■■■■□ 3.05
SDHAP1-204ENST00000427415 ARHGAP31Q2M1Z3 1444 aa34.06■■■■□ 3.04
SDHAP1-204ENST00000427415 IQGAP3Q86VI3 1631 aa34.05■■■■□ 3.04
SDHAP1-204ENST00000427415 TET3O43151 1660 aa34.05■■■■□ 3.04
SDHAP1-204ENST00000427415 EFCAB6Q5THR3 1501 aa34.04■■■■□ 3.04
SDHAP1-204ENST00000427415 ZNF142P52746 1687 aaPredicted RBP34.03■■■■□ 3.04
SDHAP1-204ENST00000427415 TNRQ92752 1358 aa34.02■■■■□ 3.04
SDHAP1-204ENST00000427415 SPATA31D1Q6ZQQ2 1576 aa34.02■■■■□ 3.04
SDHAP1-204ENST00000427415 ERVK-7P63135 1459 aa34.01■■■■□ 3.03
SDHAP1-204ENST00000427415 FBXO31Q5XUX0 539 aaPredicted RBP34■■■■□ 3.03
SDHAP1-204ENST00000427415 NUP155O75694 1391 aa33.98■■■■□ 3.03
SDHAP1-204ENST00000427415 CEP170BQ9Y4F5 1589 aaPredicted RBP33.96■■■■□ 3.03
SDHAP1-204ENST00000427415 RPRD2Q5VT52 1461 aaKnown RBP33.94■■■■□ 3.02
SDHAP1-204ENST00000427415 NLRP1Q9C000 1473 aa33.93■■■■□ 3.02
SDHAP1-204ENST00000427415 A2ML1A8K2U0 1454 aa33.91■■■■□ 3.02
SDHAP1-204ENST00000427415 HSPA2P54652 639 aa33.9■■■■□ 3.02
SDHAP1-204ENST00000427415 E9PCH4 1651 aa33.89■■■■□ 3.02
SDHAP1-204ENST00000427415 SETD5Q9C0A6 1442 aa33.84■■■■□ 3.01
SDHAP1-204ENST00000427415 NOS1P29475 1434 aa33.82■■■■□ 3
SDHAP1-204ENST00000427415 TRIM52Q96A61 297 aa33.82■■■■□ 3
SDHAP1-204ENST00000427415 SYNMO15061 1565 aa33.81■■■■□ 3
SDHAP1-204ENST00000427415 UGGT1Q9NYU2 1555 aa33.8■■■■□ 3
SDHAP1-204ENST00000427415 ACIN1Q9UKV3 1341 aaKnown RBP33.79■■■■□ 3
SDHAP1-204ENST00000427415 PLA2R1Q13018 1463 aa33.76■■■□□ 2.99
SDHAP1-204ENST00000427415 STRCQ7RTU9 1775 aa33.75■■■□□ 2.99
SDHAP1-204ENST00000427415 UBR1Q8IWV7 1749 aa33.74■■■□□ 2.99
SDHAP1-204ENST00000427415 SPHKAPQ2M3C7 1700 aa33.73■■■□□ 2.99
SDHAP1-204ENST00000427415 PIK3C2BO00750 1634 aa33.73■■■□□ 2.99
SDHAP1-204ENST00000427415 RAB3GAP2Q9H2M9 1393 aa33.72■■■□□ 2.99
SDHAP1-204ENST00000427415 KDM5AP29375 1690 aaKnown RBP33.71■■■□□ 2.99
SDHAP1-204ENST00000427415 THEMISQ8N1K5 641 aaPredicted RBP33.69■■■□□ 2.98
SDHAP1-204ENST00000427415 SLC4A1APQ9BWU0 796 aaKnown RBP33.68■■■□□ 2.98
SDHAP1-204ENST00000427415 SLC52A1Q9NWF4 448 aa33.68■■■□□ 2.98
SDHAP1-204ENST00000427415 POLR1AO95602 1720 aaPredicted RBP33.67■■■□□ 2.98
SDHAP1-204ENST00000427415 ADGRB3O60242 1522 aa33.64■■■□□ 2.98
SDHAP1-204ENST00000427415 IDI1Q13907 227 aa33.63■■■□□ 2.97
SDHAP1-204ENST00000427415 PKD2Q13563 968 aa33.62■■■□□ 2.97
SDHAP1-204ENST00000427415 STAG3Q9UJ98 1225 aa33.62■■■□□ 2.97
SDHAP1-204ENST00000427415 PTPRTO14522 1441 aa33.62■■■□□ 2.97
SDHAP1-204ENST00000427415 DMRT2Q9Y5R5 561 aa33.61■■■□□ 2.97
SDHAP1-204ENST00000427415 TRPM2O94759 1503 aa33.59■■■□□ 2.97
SDHAP1-204ENST00000427415 MYO5BQ9ULV0 1848 aa33.58■■■□□ 2.97
SDHAP1-204ENST00000427415 HRCP23327 699 aa33.57■■■□□ 2.96
SDHAP1-204ENST00000427415 MPHOSPH9Q99550 1183 aa33.56■■■□□ 2.96
SDHAP1-204ENST00000427415 SLIT1O75093 1534 aa33.56■■■□□ 2.96
SDHAP1-204ENST00000427415 NCKAP5LQ9HCH0 1330 aa33.55■■■□□ 2.96
SDHAP1-204ENST00000427415 TMEM131LA2VDJ0 1609 aa33.54■■■□□ 2.96
SDHAP1-204ENST00000427415 ARHGAP23Q9P227 1491 aa33.53■■■□□ 2.96
SDHAP1-204ENST00000427415 TRIM26Q12899 539 aaPredicted RBP33.53■■■□□ 2.96
SDHAP1-204ENST00000427415 ANKLE2Q86XL3 938 aa33.53■■■□□ 2.96
SDHAP1-204ENST00000427415 NEURL4Q96JN8 1562 aa33.52■■■□□ 2.96
SDHAP1-204ENST00000427415 CLTCL1P53675 1640 aa33.51■■■□□ 2.96
SDHAP1-204ENST00000427415 TMEM2Q9UHN6 1383 aa33.49■■■□□ 2.95
SDHAP1-204ENST00000427415 KIF1BO60333 1816 aa33.49■■■□□ 2.95
SDHAP1-204ENST00000427415 SCAF11Q99590 1463 aaKnown RBP33.48■■■□□ 2.95
SDHAP1-204ENST00000427415 CHGAP10645 457 aaKnown RBP33.46■■■□□ 2.95
SDHAP1-204ENST00000427415 MED14O60244 1454 aa33.45■■■□□ 2.95
SDHAP1-204ENST00000427415 EID1Q9Y6B2 187 aa33.45■■■□□ 2.95
SDHAP1-204ENST00000427415 IQGAP1P46940 1657 aa33.45■■■□□ 2.94
SDHAP1-204ENST00000427415 FOXD1Q16676 465 aa33.43■■■□□ 2.94
SDHAP1-204ENST00000427415 NPHP4O75161 1426 aaPredicted RBP33.43■■■□□ 2.94
SDHAP1-204ENST00000427415 TXNDC2Q86VQ3 553 aa33.4■■■□□ 2.94
SDHAP1-204ENST00000427415 CCDC144AA2RUR9 1427 aa33.37■■■□□ 2.93
SDHAP1-204ENST00000427415 ZFYVE9O95405 1425 aa33.36■■■□□ 2.93
SDHAP1-204ENST00000427415 RIMS2Q9UQ26 1411 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms