RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 TNRQ92752 1358 aa23.2■■□□□ 1.3
HDAC6-206ENST00000426196 VWDEQ8N2E2 1590 aa23.15■■□□□ 1.3
HDAC6-206ENST00000426196 FAM135AQ9P2D6 1515 aa23.15■■□□□ 1.3
HDAC6-206ENST00000426196 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
HDAC6-206ENST00000426196 PZPP20742 1482 aa23.15■■□□□ 1.3
HDAC6-206ENST00000426196 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.3
HDAC6-206ENST00000426196 RTEL1-TNFRSF6BF6WH68 1400 aa23.13■■□□□ 1.29
HDAC6-206ENST00000426196 MTUS2Q5JR59 1369 aa23.13■■□□□ 1.29
HDAC6-206ENST00000426196 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
HDAC6-206ENST00000426196 FBXO31Q5XUX0 539 aaPredicted RBP23.12■■□□□ 1.29
HDAC6-206ENST00000426196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.12■■□□□ 1.29
HDAC6-206ENST00000426196 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
HDAC6-206ENST00000426196 THEMISQ8N1K5 641 aaPredicted RBP23.11■■□□□ 1.29
HDAC6-206ENST00000426196 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
HDAC6-206ENST00000426196 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
HDAC6-206ENST00000426196 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
HDAC6-206ENST00000426196 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
HDAC6-206ENST00000426196 KIF3BO15066 747 aa23.09■■□□□ 1.29
HDAC6-206ENST00000426196 MED14O60244 1454 aa23.09■■□□□ 1.29
HDAC6-206ENST00000426196 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
HDAC6-206ENST00000426196 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
HDAC6-206ENST00000426196 IQGAP1P46940 1657 aa23.09■■□□□ 1.29
HDAC6-206ENST00000426196 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.28
HDAC6-206ENST00000426196 RNF17Q9BXT8 1623 aaKnown RBP23.06■■□□□ 1.28
HDAC6-206ENST00000426196 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
HDAC6-206ENST00000426196 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
HDAC6-206ENST00000426196 SYNMO15061 1565 aa23.05■■□□□ 1.28
HDAC6-206ENST00000426196 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
HDAC6-206ENST00000426196 STRCP1A6NGW2 1772 aa23.03■■□□□ 1.28
HDAC6-206ENST00000426196 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
HDAC6-206ENST00000426196 CCDC141Q6ZP82 1450 aa23.01■■□□□ 1.27
HDAC6-206ENST00000426196 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
HDAC6-206ENST00000426196 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
HDAC6-206ENST00000426196 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
HDAC6-206ENST00000426196 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
HDAC6-206ENST00000426196 CAMSAP2Q08AD1 1489 aa22.93■■□□□ 1.26
HDAC6-206ENST00000426196 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
HDAC6-206ENST00000426196 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
HDAC6-206ENST00000426196 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
HDAC6-206ENST00000426196 ABCC3O15438 1527 aa22.88■■□□□ 1.25
HDAC6-206ENST00000426196 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
HDAC6-206ENST00000426196 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
HDAC6-206ENST00000426196 ARHGEF5Q12774 1597 aa22.87■■□□□ 1.25
HDAC6-206ENST00000426196 SCAF11Q99590 1463 aaKnown RBP22.86■■□□□ 1.25
HDAC6-206ENST00000426196 TSPY4P0CV99 314 aa22.86■■□□□ 1.25
HDAC6-206ENST00000426196 TSPY10P0CW01 314 aa22.86■■□□□ 1.25
HDAC6-206ENST00000426196 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
HDAC6-206ENST00000426196 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
HDAC6-206ENST00000426196 EIF2AK4Q9P2K8 1649 aaKnown RBP22.82■■□□□ 1.24
HDAC6-206ENST00000426196 CEP152O94986 1710 aa22.81■■□□□ 1.24
HDAC6-206ENST00000426196 SLIT1O75093 1534 aa22.78■■□□□ 1.24
HDAC6-206ENST00000426196 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
HDAC6-206ENST00000426196 MAST1Q9Y2H9 1570 aa22.77■■□□□ 1.24
HDAC6-206ENST00000426196 TXNDC2Q86VQ3 553 aa22.77■■□□□ 1.24
HDAC6-206ENST00000426196 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
HDAC6-206ENST00000426196 MROH1Q8NDA8 1641 aa22.76■■□□□ 1.23
HDAC6-206ENST00000426196 LTKP29376 864 aa22.75■■□□□ 1.23
HDAC6-206ENST00000426196 POTEAQ6S8J7 498 aa22.75■■□□□ 1.23
HDAC6-206ENST00000426196 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
HDAC6-206ENST00000426196 ROBO1Q9Y6N7 1651 aa22.72■■□□□ 1.23
HDAC6-206ENST00000426196 SETD1AO15047 1707 aaKnown RBP22.69■■□□□ 1.22
HDAC6-206ENST00000426196 TMEM94Q12767 1356 aa22.68■■□□□ 1.22
HDAC6-206ENST00000426196 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
HDAC6-206ENST00000426196 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
HDAC6-206ENST00000426196 DUOX2Q9NRD8 1548 aa22.67■■□□□ 1.22
HDAC6-206ENST00000426196 ARHGAP31Q2M1Z3 1444 aa22.66■■□□□ 1.22
HDAC6-206ENST00000426196 TMEM2Q9UHN6 1383 aa22.65■■□□□ 1.22
HDAC6-206ENST00000426196 PRDM15P57071 1507 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-206ENST00000426196 STAG3Q9UJ98 1225 aa22.64■■□□□ 1.21
HDAC6-206ENST00000426196 MAP3K1Q13233 1512 aa22.63■■□□□ 1.21
HDAC6-206ENST00000426196 KDM5AP29375 1690 aaKnown RBP22.63■■□□□ 1.21
HDAC6-206ENST00000426196 KCNA6P17658 529 aa22.62■■□□□ 1.21
HDAC6-206ENST00000426196 PHLPP1O60346 1717 aa22.61■■□□□ 1.21
HDAC6-206ENST00000426196 PROSER2Q86WR7 435 aaPredicted RBP22.61■■□□□ 1.21
HDAC6-206ENST00000426196 EFCAB6Q5THR3 1501 aa22.61■■□□□ 1.21
HDAC6-206ENST00000426196 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
HDAC6-206ENST00000426196 ERBINQ96RT1 1412 aa22.57■■□□□ 1.2
HDAC6-206ENST00000426196 MSH6P52701 1360 aa22.57■■□□□ 1.2
HDAC6-206ENST00000426196 KIF15Q9NS87 1388 aa22.57■■□□□ 1.2
HDAC6-206ENST00000426196 JCADQ9P266 1359 aa22.57■■□□□ 1.2
HDAC6-206ENST00000426196 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
HDAC6-206ENST00000426196 TET3O43151 1660 aa22.56■■□□□ 1.2
HDAC6-206ENST00000426196 NWD1Q149M9 1564 aa22.56■■□□□ 1.2
HDAC6-206ENST00000426196 RBM33Q96EV2 1170 aaKnown RBP22.55■■□□□ 1.2
HDAC6-206ENST00000426196 SLC26A8Q96RN1 970 aa22.55■■□□□ 1.2
HDAC6-206ENST00000426196 KANK1Q14678 1352 aa22.54■■□□□ 1.2
HDAC6-206ENST00000426196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.22e-7■■□□□ 13.7
HDAC6-206ENST00000426196 CROCC2H7BZ55 1655 aa22.52■■□□□ 1.2
HDAC6-206ENST00000426196 SLAIN2Q9P270 581 aa22.51■■□□□ 1.19
HDAC6-206ENST00000426196 IDI1Q13907 227 aa22.5■■□□□ 1.19
HDAC6-206ENST00000426196 ADGRB3O60242 1522 aa22.5■■□□□ 1.19
HDAC6-206ENST00000426196 COL16A1Q07092 1604 aaPredicted RBP22.49■■□□□ 1.19
HDAC6-206ENST00000426196 BCANQ96GW7 911 aa22.48■■□□□ 1.19
HDAC6-206ENST00000426196 RRP7BPQ9NSQ0 103 aa22.48■■□□□ 1.19
HDAC6-206ENST00000426196 LMTK2Q8IWU2 1503 aa22.47■■□□□ 1.19
HDAC6-206ENST00000426196 MEX3CQ5U5Q3 659 aaKnown RBP22.46■■□□□ 1.19
HDAC6-206ENST00000426196 ZNF772Q68DY9 489 aaPredicted RBP22.46■■□□□ 1.19
HDAC6-206ENST00000426196 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.19
HDAC6-206ENST00000426196 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.19
HDAC6-206ENST00000426196 SPATA31A6Q5VVP1 1343 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms