RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
SGCE-203ENST00000425444 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
SGCE-203ENST00000425444 TNRQ92752 1358 aa20.23■□□□□ 0.83
SGCE-203ENST00000425444 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
SGCE-203ENST00000425444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.83
SGCE-203ENST00000425444 INO80Q9ULG1 1556 aaPredicted RBP20.22■□□□□ 0.83
SGCE-203ENST00000425444 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
SGCE-203ENST00000425444 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
SGCE-203ENST00000425444 NPHP4O75161 1426 aaPredicted RBP20.19■□□□□ 0.82
SGCE-203ENST00000425444 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
SGCE-203ENST00000425444 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
SGCE-203ENST00000425444 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
SGCE-203ENST00000425444 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
SGCE-203ENST00000425444 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
SGCE-203ENST00000425444 PLEKHH2Q8IVE3 1493 aa20.17■□□□□ 0.82
SGCE-203ENST00000425444 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
SGCE-203ENST00000425444 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
SGCE-203ENST00000425444 MED14O60244 1454 aa20.15■□□□□ 0.82
SGCE-203ENST00000425444 RNF17Q9BXT8 1623 aaKnown RBP20.14■□□□□ 0.81
SGCE-203ENST00000425444 POTEAQ6S8J7 498 aa20.14■□□□□ 0.81
SGCE-203ENST00000425444 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
SGCE-203ENST00000425444 FAM135AQ9P2D6 1515 aa20.12■□□□□ 0.81
SGCE-203ENST00000425444 PZPP20742 1482 aa20.12■□□□□ 0.81
SGCE-203ENST00000425444 STRCP1A6NGW2 1772 aa20.12■□□□□ 0.81
SGCE-203ENST00000425444 IQGAP1P46940 1657 aa20.12■□□□□ 0.81
SGCE-203ENST00000425444 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
SGCE-203ENST00000425444 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
SGCE-203ENST00000425444 SRCAPQ6ZRS2 3230 aa20.11■□□□□ 0.81
SGCE-203ENST00000425444 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
SGCE-203ENST00000425444 KIF3BO15066 747 aa20.1■□□□□ 0.81
SGCE-203ENST00000425444 NLRP1Q9C000 1473 aa20.1■□□□□ 0.81
SGCE-203ENST00000425444 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
SGCE-203ENST00000425444 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
SGCE-203ENST00000425444 SYNMO15061 1565 aa20.08■□□□□ 0.81
SGCE-203ENST00000425444 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
SGCE-203ENST00000425444 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
SGCE-203ENST00000425444 ZNF644Q9H582 1327 aaPredicted RBP20.05■□□□□ 0.8
SGCE-203ENST00000425444 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
SGCE-203ENST00000425444 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
SGCE-203ENST00000425444 SETD1AO15047 1707 aaKnown RBP20■□□□□ 0.79
SGCE-203ENST00000425444 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
SGCE-203ENST00000425444 MAP3K1Q13233 1512 aa19.99■□□□□ 0.79
SGCE-203ENST00000425444 APLP2Q06481 763 aa19.98■□□□□ 0.79
SGCE-203ENST00000425444 FAM135BQ49AJ0 1406 aa19.98■□□□□ 0.79
SGCE-203ENST00000425444 CAMSAP2Q08AD1 1489 aa19.97■□□□□ 0.79
SGCE-203ENST00000425444 ZC3H13Q5T200 1668 aaKnown RBP19.95■□□□□ 0.78
SGCE-203ENST00000425444 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
SGCE-203ENST00000425444 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
SGCE-203ENST00000425444 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
SGCE-203ENST00000425444 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
SGCE-203ENST00000425444 LTKP29376 864 aa19.9■□□□□ 0.78
SGCE-203ENST00000425444 TXNDC2Q86VQ3 553 aa19.9■□□□□ 0.78
SGCE-203ENST00000425444 UPF1Q92900 1129 aaKnown RBP eCLIP19.89■□□□□ 0.77
SGCE-203ENST00000425444 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
SGCE-203ENST00000425444 ROBO1Q9Y6N7 1651 aa19.87■□□□□ 0.77
SGCE-203ENST00000425444 ERVK-7P63135 1459 aa19.87■□□□□ 0.77
SGCE-203ENST00000425444 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
SGCE-203ENST00000425444 TMEM94Q12767 1356 aa19.86■□□□□ 0.77
SGCE-203ENST00000425444 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
SGCE-203ENST00000425444 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
SGCE-203ENST00000425444 EID1Q9Y6B2 187 aa19.85■□□□□ 0.77
SGCE-203ENST00000425444 ARHGEF5Q12774 1597 aa19.85■□□□□ 0.77
SGCE-203ENST00000425444 ABCC3O15438 1527 aa19.85■□□□□ 0.77
SGCE-203ENST00000425444 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
SGCE-203ENST00000425444 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
SGCE-203ENST00000425444 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
SGCE-203ENST00000425444 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
SGCE-203ENST00000425444 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
SGCE-203ENST00000425444 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
SGCE-203ENST00000425444 JCADQ9P266 1359 aa19.81■□□□□ 0.76
SGCE-203ENST00000425444 SLIT1O75093 1534 aa19.81■□□□□ 0.76
SGCE-203ENST00000425444 KCNA6P17658 529 aa19.78■□□□□ 0.76
SGCE-203ENST00000425444 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
SGCE-203ENST00000425444 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.76
SGCE-203ENST00000425444 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
SGCE-203ENST00000425444 SLAIN2Q9P270 581 aa19.75■□□□□ 0.75
SGCE-203ENST00000425444 PTPN23Q9H3S7 1636 aa19.75■□□□□ 0.75
SGCE-203ENST00000425444 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
SGCE-203ENST00000425444 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
SGCE-203ENST00000425444 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
SGCE-203ENST00000425444 MSH6P52701 1360 aa19.73■□□□□ 0.75
SGCE-203ENST00000425444 FGD6Q6ZV73 1430 aa19.73■□□□□ 0.75
SGCE-203ENST00000425444 CEP152O94986 1710 aa19.73■□□□□ 0.75
SGCE-203ENST00000425444 TMEM2Q9UHN6 1383 aa19.72■□□□□ 0.75
SGCE-203ENST00000425444 RXRBP28702 533 aa19.71■□□□□ 0.75
SGCE-203ENST00000425444 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
SGCE-203ENST00000425444 LRP6O75581 1613 aa19.69■□□□□ 0.74
SGCE-203ENST00000425444 SPATA31A6Q5VVP1 1343 aa19.69■□□□□ 0.74
SGCE-203ENST00000425444 MROH1Q8NDA8 1641 aa19.69■□□□□ 0.74
SGCE-203ENST00000425444 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
SGCE-203ENST00000425444 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
SGCE-203ENST00000425444 PIK3C2BO00750 1634 aa19.67■□□□□ 0.74
SGCE-203ENST00000425444 NKTRP30414 1462 aaKnown RBP19.67■□□□□ 0.74
SGCE-203ENST00000425444 COL16A1Q07092 1604 aaPredicted RBP19.66■□□□□ 0.74
SGCE-203ENST00000425444 BCANQ96GW7 911 aa19.66■□□□□ 0.74
SGCE-203ENST00000425444 ABCC5O15440 1437 aa19.66■□□□□ 0.74
SGCE-203ENST00000425444 DAPK1P53355 1430 aa19.66■□□□□ 0.74
SGCE-203ENST00000425444 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
SGCE-203ENST00000425444 TET3O43151 1660 aa19.64■□□□□ 0.73
SGCE-203ENST00000425444 EFCAB6Q5THR3 1501 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms