RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 KIF3BO15066 747 aa14.85□□□□□ -0.03
NUP50-205ENST00000419387 APLP2Q06481 763 aa14.85□□□□□ -0.03
NUP50-205ENST00000419387 CERKQ8TCT0 537 aa14.85□□□□□ -0.03
NUP50-205ENST00000419387 CLTCQ00610 1675 aaKnown RBP14.84□□□□□ -0.03
NUP50-205ENST00000419387 STRCQ7RTU9 1775 aa14.84□□□□□ -0.03
NUP50-205ENST00000419387 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
NUP50-205ENST00000419387 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
NUP50-205ENST00000419387 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
NUP50-205ENST00000419387 PTPRTO14522 1441 aa14.82□□□□□ -0.04
NUP50-205ENST00000419387 PTPRKQ15262 1439 aa14.82□□□□□ -0.04
NUP50-205ENST00000419387 MYOM3Q5VTT5 1437 aa14.82□□□□□ -0.04
NUP50-205ENST00000419387 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
NUP50-205ENST00000419387 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
NUP50-205ENST00000419387 WASHC2CQ9Y4E1 1318 aa14.79□□□□□ -0.04
NUP50-205ENST00000419387 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
NUP50-205ENST00000419387 NCKAP5LQ9HCH0 1330 aa14.76□□□□□ -0.05
NUP50-205ENST00000419387 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
NUP50-205ENST00000419387 MAST1Q9Y2H9 1570 aa14.76□□□□□ -0.05
NUP50-205ENST00000419387 PKD2Q13563 968 aa14.75□□□□□ -0.05
NUP50-205ENST00000419387 KDM5DQ9BY66 1539 aa14.75□□□□□ -0.05
NUP50-205ENST00000419387 FAM135AQ9P2D6 1515 aa14.75□□□□□ -0.05
NUP50-205ENST00000419387 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
NUP50-205ENST00000419387 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
NUP50-205ENST00000419387 PZPP20742 1482 aa14.73□□□□□ -0.05
NUP50-205ENST00000419387 ZNF142P52746 1687 aaPredicted RBP14.73□□□□□ -0.05
NUP50-205ENST00000419387 TNRQ92752 1358 aa14.73□□□□□ -0.05
NUP50-205ENST00000419387 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
NUP50-205ENST00000419387 PLA2R1Q13018 1463 aa14.72□□□□□ -0.05
NUP50-205ENST00000419387 ABCC5O15440 1437 aa14.71□□□□□ -0.05
NUP50-205ENST00000419387 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
NUP50-205ENST00000419387 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
NUP50-205ENST00000419387 FGD6Q6ZV73 1430 aa14.69□□□□□ -0.06
NUP50-205ENST00000419387 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
NUP50-205ENST00000419387 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
NUP50-205ENST00000419387 DUOX2Q9NRD8 1548 aa14.68□□□□□ -0.06
NUP50-205ENST00000419387 DNMT1P26358 1616 aaKnown RBP14.68□□□□□ -0.06
NUP50-205ENST00000419387 LTBP4Q8N2S1 1624 aa14.68□□□□□ -0.06
NUP50-205ENST00000419387 EIF2AK4Q9P2K8 1649 aaKnown RBP14.68□□□□□ -0.06
NUP50-205ENST00000419387 KIF15Q9NS87 1388 aa14.68□□□□□ -0.06
NUP50-205ENST00000419387 SHANK2Q9UPX8 1470 aa14.68□□□□□ -0.06
NUP50-205ENST00000419387 DAPK1P53355 1430 aa14.67□□□□□ -0.06
NUP50-205ENST00000419387 THEMISQ8N1K5 641 aaPredicted RBP14.67□□□□□ -0.06
NUP50-205ENST00000419387 ABCC3O15438 1527 aa14.66□□□□□ -0.06
NUP50-205ENST00000419387 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
NUP50-205ENST00000419387 NLRP1Q9C000 1473 aa14.65□□□□□ -0.06
NUP50-205ENST00000419387 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
NUP50-205ENST00000419387 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
NUP50-205ENST00000419387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.64□□□□□ -0.07
NUP50-205ENST00000419387 ANKLE2Q86XL3 938 aa14.64□□□□□ -0.07
NUP50-205ENST00000419387 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
NUP50-205ENST00000419387 ZC3H13Q5T200 1668 aaKnown RBP14.64□□□□□ -0.07
NUP50-205ENST00000419387 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
NUP50-205ENST00000419387 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
NUP50-205ENST00000419387 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
NUP50-205ENST00000419387 IQSEC2Q5JU85 1478 aa14.63□□□□□ -0.07
NUP50-205ENST00000419387 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
NUP50-205ENST00000419387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.073e-6■□□□□ 11.3
NUP50-205ENST00000419387 UGGT1Q9NYU2 1555 aa14.62□□□□□ -0.07
NUP50-205ENST00000419387 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
NUP50-205ENST00000419387 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
NUP50-205ENST00000419387 KANK1Q14678 1352 aa14.6□□□□□ -0.07
NUP50-205ENST00000419387 ARHGAP31Q2M1Z3 1444 aa14.59□□□□□ -0.07
NUP50-205ENST00000419387 CEP152O94986 1710 aa14.59□□□□□ -0.07
NUP50-205ENST00000419387 PRDM15P57071 1507 aaPredicted RBP14.58□□□□□ -0.08
NUP50-205ENST00000419387 NEURL4Q96JN8 1562 aa14.57□□□□□ -0.08
NUP50-205ENST00000419387 POLR1AO95602 1720 aaPredicted RBP14.57□□□□□ -0.08
NUP50-205ENST00000419387 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
NUP50-205ENST00000419387 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
NUP50-205ENST00000419387 MED14O60244 1454 aa14.56□□□□□ -0.08
NUP50-205ENST00000419387 ADGRL2O95490 1459 aa14.56□□□□□ -0.08
NUP50-205ENST00000419387 UBAP1LF5GYI3 381 aa14.55□□□□□ -0.08
NUP50-205ENST00000419387 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
NUP50-205ENST00000419387 LMTK2Q8IWU2 1503 aa14.52□□□□□ -0.08
NUP50-205ENST00000419387 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
NUP50-205ENST00000419387 CPS1P31327 1500 aa14.51□□□□□ -0.09
NUP50-205ENST00000419387 TXNDC2Q86VQ3 553 aa14.51□□□□□ -0.09
NUP50-205ENST00000419387 ANKRD50Q9ULJ7 1429 aa14.5□□□□□ -0.09
NUP50-205ENST00000419387 UBR1Q8IWV7 1749 aa14.5□□□□□ -0.09
NUP50-205ENST00000419387 LTKP29376 864 aa14.5□□□□□ -0.09
NUP50-205ENST00000419387 IDI1Q13907 227 aa14.5□□□□□ -0.09
NUP50-205ENST00000419387 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
NUP50-205ENST00000419387 EID1Q9Y6B2 187 aa14.49□□□□□ -0.09
NUP50-205ENST00000419387 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
NUP50-205ENST00000419387 SCAF11Q99590 1463 aaKnown RBP14.48□□□□□ -0.09
NUP50-205ENST00000419387 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
NUP50-205ENST00000419387 IQGAP1P46940 1657 aa14.48□□□□□ -0.09
NUP50-205ENST00000419387 SLIT1O75093 1534 aa14.47□□□□□ -0.09
NUP50-205ENST00000419387 TOM1O60784 492 aa14.47□□□□□ -0.09
NUP50-205ENST00000419387 NOS1P29475 1434 aa14.47□□□□□ -0.09
NUP50-205ENST00000419387 SLC52A1Q9NWF4 448 aa14.46□□□□□ -0.09
NUP50-205ENST00000419387 ROCK1Q13464 1354 aa14.46□□□□□ -0.1
NUP50-205ENST00000419387 TMEM2Q9UHN6 1383 aa14.46□□□□□ -0.1
NUP50-205ENST00000419387 PIK3C2BO00750 1634 aa14.45□□□□□ -0.1
NUP50-205ENST00000419387 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
NUP50-205ENST00000419387 EFCAB6Q5THR3 1501 aa14.45□□□□□ -0.1
NUP50-205ENST00000419387 ITGAEP38570 1179 aa14.44□□□□□ -0.1
NUP50-205ENST00000419387 PIP4K2BP78356 416 aa14.44□□□□□ -0.1
NUP50-205ENST00000419387 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
NUP50-205ENST00000419387 SYNMO15061 1565 aa14.43□□□□□ -0.1
NUP50-205ENST00000419387 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms