RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-203ENST00000419007 RALGAPBQ86X10 1494 aa20.29■□□□□ 0.84
SEMA3B-203ENST00000419007 RALBP1Q15311 655 aa20.28■□□□□ 0.84
SEMA3B-203ENST00000419007 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
SEMA3B-203ENST00000419007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.28■□□□□ 0.842e-7■■■□□ 16.2
SEMA3B-203ENST00000419007 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-203ENST00000419007 IPO9Q96P70 1041 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-203ENST00000419007 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
SEMA3B-203ENST00000419007 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
SEMA3B-203ENST00000419007 UHRF1BP1Q6BDS2 1440 aa20.26■□□□□ 0.83
SEMA3B-203ENST00000419007 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-203ENST00000419007 BRD4O60885 1362 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-203ENST00000419007 PTPRGP23470 1445 aa20.25■□□□□ 0.83
SEMA3B-203ENST00000419007 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-203ENST00000419007 NBPF1Q3BBV0 1214 aa20.23■□□□□ 0.83
SEMA3B-203ENST00000419007 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
SEMA3B-203ENST00000419007 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
SEMA3B-203ENST00000419007 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-203ENST00000419007 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-203ENST00000419007 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
SEMA3B-203ENST00000419007 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-203ENST00000419007 ERCC6L2Q5T890 1561 aa20.19■□□□□ 0.82
SEMA3B-203ENST00000419007 ARHGEF12Q9NZN5 1544 aa20.18■□□□□ 0.82
SEMA3B-203ENST00000419007 PLIN1O60240 522 aa20.17■□□□□ 0.82
SEMA3B-203ENST00000419007 ATP10BO94823 1461 aa20.17■□□□□ 0.82
SEMA3B-203ENST00000419007 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
SEMA3B-203ENST00000419007 CCDC144AA2RUR9 1427 aa20.16■□□□□ 0.82
SEMA3B-203ENST00000419007 CDC42BPAQ5VT25 1732 aa20.15■□□□□ 0.82
SEMA3B-203ENST00000419007 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
SEMA3B-203ENST00000419007 SHANK2Q9UPX8 1470 aa20.13■□□□□ 0.81
SEMA3B-203ENST00000419007 PANK3Q9H999 370 aa20.12■□□□□ 0.81
SEMA3B-203ENST00000419007 PDE3BQ13370 1112 aa20.11■□□□□ 0.81
SEMA3B-203ENST00000419007 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
SEMA3B-203ENST00000419007 PDE4AP27815 886 aa20.1■□□□□ 0.81
SEMA3B-203ENST00000419007 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
SEMA3B-203ENST00000419007 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
SEMA3B-203ENST00000419007 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
SEMA3B-203ENST00000419007 PRAG1Q86YV5 1406 aa20.08■□□□□ 0.81
SEMA3B-203ENST00000419007 FAM135AQ9P2D6 1515 aa20.08■□□□□ 0.81
SEMA3B-203ENST00000419007 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
SEMA3B-203ENST00000419007 DISP3Q9P2K9 1392 aa20.07■□□□□ 0.8
SEMA3B-203ENST00000419007 KDM5DQ9BY66 1539 aa20.06■□□□□ 0.8
SEMA3B-203ENST00000419007 CCDC141Q6ZP82 1450 aa20.05■□□□□ 0.8
SEMA3B-203ENST00000419007 TMF1P82094 1093 aa20.05■□□□□ 0.8
SEMA3B-203ENST00000419007 CYB5RLQ6IPT4 315 aa20.05■□□□□ 0.8
SEMA3B-203ENST00000419007 CRBNQ96SW2 442 aa20.05■□□□□ 0.8
SEMA3B-203ENST00000419007 ABCA8O94911 1581 aa20.04■□□□□ 0.8
SEMA3B-203ENST00000419007 SLC24A1O60721 1099 aa20.04■□□□□ 0.8
SEMA3B-203ENST00000419007 TESK2Q96S53 571 aa20.03■□□□□ 0.8
SEMA3B-203ENST00000419007 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
SEMA3B-203ENST00000419007 BACH2Q9BYV9 841 aa20.02■□□□□ 0.8
SEMA3B-203ENST00000419007 RSPH4AQ5TD94 716 aa20.01■□□□□ 0.79
SEMA3B-203ENST00000419007 E9PCH4 1651 aa20■□□□□ 0.79
SEMA3B-203ENST00000419007 ADAMTS8Q9UP79 889 aa20■□□□□ 0.79
SEMA3B-203ENST00000419007 A2MP01023 1474 aa20■□□□□ 0.79
SEMA3B-203ENST00000419007 ERBINQ96RT1 1412 aa19.99■□□□□ 0.79
SEMA3B-203ENST00000419007 TRPM1Q7Z4N2 1603 aa19.98■□□□□ 0.79
SEMA3B-203ENST00000419007 NEFMP07197 916 aa19.98■□□□□ 0.79
SEMA3B-203ENST00000419007 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
SEMA3B-203ENST00000419007 SAMD9LQ8IVG5 1584 aa19.98■□□□□ 0.79
SEMA3B-203ENST00000419007 PLA2R1Q13018 1463 aa19.98■□□□□ 0.79
SEMA3B-203ENST00000419007 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.792e-6■□□□□ 9.3
SEMA3B-203ENST00000419007 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
SEMA3B-203ENST00000419007 MS4A1P11836 297 aa19.97■□□□□ 0.79
SEMA3B-203ENST00000419007 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
SEMA3B-203ENST00000419007 COL17A1Q9UMD9 1497 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-203ENST00000419007 ARHGAP5Q13017 1502 aa19.96■□□□□ 0.79
SEMA3B-203ENST00000419007 SYCP2Q9BX26 1530 aa19.96■□□□□ 0.79
SEMA3B-203ENST00000419007 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
SEMA3B-203ENST00000419007 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
SEMA3B-203ENST00000419007 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
SEMA3B-203ENST00000419007 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
SEMA3B-203ENST00000419007 NPM1P06748 294 aaKnown RBP eCLIP19.94■□□□□ 0.78
SEMA3B-203ENST00000419007 CDC42BPBQ9Y5S2 1711 aa19.92■□□□□ 0.78
SEMA3B-203ENST00000419007 BLMP54132 1417 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-203ENST00000419007 PPP2R1AP30153 589 aa19.89■□□□□ 0.78
SEMA3B-203ENST00000419007 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
SEMA3B-203ENST00000419007 CCDC146Q8IYE0 955 aa19.88■□□□□ 0.77
SEMA3B-203ENST00000419007 PREX2Q70Z35 1606 aa19.87■□□□□ 0.77
SEMA3B-203ENST00000419007 PRDM15P57071 1507 aaPredicted RBP19.87■□□□□ 0.77
SEMA3B-203ENST00000419007 DAXXQ9UER7 740 aaPredicted RBP19.87■□□□□ 0.77
SEMA3B-203ENST00000419007 PLEKHH1Q9ULM0 1364 aa19.85■□□□□ 0.77
SEMA3B-203ENST00000419007 GOLGA2Q08379 1002 aa19.85■□□□□ 0.77
SEMA3B-203ENST00000419007 RGS3P49796 1198 aa19.84■□□□□ 0.77
SEMA3B-203ENST00000419007 DUSP27Q5VZP5 1158 aa19.84■□□□□ 0.77
SEMA3B-203ENST00000419007 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
SEMA3B-203ENST00000419007 TTC37Q6PGP7 1564 aa19.83■□□□□ 0.77
SEMA3B-203ENST00000419007 PPM1GO15355 546 aaPredicted RBP19.83■□□□□ 0.77
SEMA3B-203ENST00000419007 ZMYM4Q5VZL5 1548 aa19.83■□□□□ 0.76
SEMA3B-203ENST00000419007 ABCC2Q92887 1545 aa19.83■□□□□ 0.76
SEMA3B-203ENST00000419007 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
SEMA3B-203ENST00000419007 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-203ENST00000419007 AMER1Q5JTC6 1135 aaPredicted RBP19.81■□□□□ 0.76
SEMA3B-203ENST00000419007 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
SEMA3B-203ENST00000419007 UNC13BO14795 1591 aa19.8■□□□□ 0.76
SEMA3B-203ENST00000419007 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
SEMA3B-203ENST00000419007 CENPQQ7L2Z9 268 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-203ENST00000419007 RTN4Q9NQC3 1192 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-203ENST00000419007 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-203ENST00000419007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms