RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 RCAN3Q9UKA8 241 aa23■■□□□ 1.27
PMS1-206ENST00000418224 KIAA0586Q9BVV6 1533 aa22.99■■□□□ 1.27
PMS1-206ENST00000418224 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
PMS1-206ENST00000418224 ROCK2O75116 1388 aaKnown RBP22.99■■□□□ 1.27
PMS1-206ENST00000418224 KIF15Q9NS87 1388 aa22.98■■□□□ 1.27
PMS1-206ENST00000418224 ANKRD50Q9ULJ7 1429 aa22.97■■□□□ 1.27
PMS1-206ENST00000418224 KDM5CP41229 1560 aa22.97■■□□□ 1.27
PMS1-206ENST00000418224 KIF14Q15058 1648 aa22.97■■□□□ 1.27
PMS1-206ENST00000418224 GPATCH8Q9UKJ3 1502 aaKnown RBP22.96■■□□□ 1.27
PMS1-206ENST00000418224 PLIN1O60240 522 aa22.95■■□□□ 1.26
PMS1-206ENST00000418224 VSIG10Q8N0Z9 540 aa22.95■■□□□ 1.26
PMS1-206ENST00000418224 MYBBP1AQ9BQG0 1328 aaKnown RBP22.94■■□□□ 1.26
PMS1-206ENST00000418224 FBLN2P98095 1184 aa22.94■■□□□ 1.26
PMS1-206ENST00000418224 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
PMS1-206ENST00000418224 GLIPR1L2Q4G1C9 344 aa22.92■■□□□ 1.26
PMS1-206ENST00000418224 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
PMS1-206ENST00000418224 RALBP1Q15311 655 aa22.91■■□□□ 1.26
PMS1-206ENST00000418224 RALGAPBQ86X10 1494 aa22.91■■□□□ 1.26
PMS1-206ENST00000418224 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
PMS1-206ENST00000418224 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
PMS1-206ENST00000418224 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
PMS1-206ENST00000418224 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
PMS1-206ENST00000418224 ZMYND15Q9H091 742 aa22.88■■□□□ 1.25
PMS1-206ENST00000418224 ADGRL2O95490 1459 aa22.88■■□□□ 1.25
PMS1-206ENST00000418224 ITSN2Q9NZM3 1697 aa22.88■■□□□ 1.25
PMS1-206ENST00000418224 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
PMS1-206ENST00000418224 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
PMS1-206ENST00000418224 UHRF1BP1Q6BDS2 1440 aa22.87■■□□□ 1.25
PMS1-206ENST00000418224 RRAGDQ9NQL2 400 aaPredicted RBP22.86■■□□□ 1.25
PMS1-206ENST00000418224 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
PMS1-206ENST00000418224 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
PMS1-206ENST00000418224 ARXQ96QS3 562 aa22.85■■□□□ 1.25
PMS1-206ENST00000418224 CRBNQ96SW2 442 aa22.84■■□□□ 1.25
PMS1-206ENST00000418224 RGL3Q3MIN7 710 aa22.84■■□□□ 1.25
PMS1-206ENST00000418224 C9orf84Q5VXU9 1444 aa22.83■■□□□ 1.25
PMS1-206ENST00000418224 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
PMS1-206ENST00000418224 NLRP13Q86W25 1043 aa22.83■■□□□ 1.24
PMS1-206ENST00000418224 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.24
PMS1-206ENST00000418224 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.244e-6■■■■□ 23.6
PMS1-206ENST00000418224 KTN1Q86UP2 1357 aaKnown RBP22.81■■□□□ 1.24
PMS1-206ENST00000418224 NAP1L5Q96NT1 182 aaPredicted RBP22.81■■□□□ 1.24
PMS1-206ENST00000418224 POGKQ9P215 609 aa22.8■■□□□ 1.24
PMS1-206ENST00000418224 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
PMS1-206ENST00000418224 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
PMS1-206ENST00000418224 ARHGEF12Q9NZN5 1544 aa22.78■■□□□ 1.24
PMS1-206ENST00000418224 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
PMS1-206ENST00000418224 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
PMS1-206ENST00000418224 PDE3BQ13370 1112 aa22.74■■□□□ 1.23
PMS1-206ENST00000418224 CARMIL2Q6F5E8 1435 aa22.74■■□□□ 1.23
PMS1-206ENST00000418224 RGS3P49796 1198 aa22.73■■□□□ 1.23
PMS1-206ENST00000418224 HSP90AA2PQ14568 343 aaPredicted RBP22.73■■□□□ 1.23
PMS1-206ENST00000418224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.234e-6■■□□□ 13.1
PMS1-206ENST00000418224 FAM161AQ3B820 660 aa22.72■■□□□ 1.23
PMS1-206ENST00000418224 C20orf194Q5TEA3 1177 aa22.71■■□□□ 1.23
PMS1-206ENST00000418224 PARD3Q8TEW0 1356 aa22.71■■□□□ 1.23
PMS1-206ENST00000418224 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
PMS1-206ENST00000418224 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
PMS1-206ENST00000418224 C8orf34Q49A92 452 aa22.69■■□□□ 1.22
PMS1-206ENST00000418224 CCDC144AA2RUR9 1427 aa22.68■■□□□ 1.22
PMS1-206ENST00000418224 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
PMS1-206ENST00000418224 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
PMS1-206ENST00000418224 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
PMS1-206ENST00000418224 SHANK2Q9UPX8 1470 aa22.67■■□□□ 1.22
PMS1-206ENST00000418224 PER1O15534 1290 aaPredicted RBP22.67■■□□□ 1.22
PMS1-206ENST00000418224 PNNQ9H307 717 aaKnown RBP22.67■■□□□ 1.22
PMS1-206ENST00000418224 HSP90AA1P07900 732 aaKnown RBP22.66■■□□□ 1.22
PMS1-206ENST00000418224 PANK3Q9H999 370 aa22.66■■□□□ 1.22
PMS1-206ENST00000418224 SLKQ9H2G2 1235 aaPredicted RBP22.66■■□□□ 1.22
PMS1-206ENST00000418224 E9PCH4 1651 aa22.64■■□□□ 1.22
PMS1-206ENST00000418224 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
PMS1-206ENST00000418224 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
PMS1-206ENST00000418224 ATP10BO94823 1461 aa22.63■■□□□ 1.21
PMS1-206ENST00000418224 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
PMS1-206ENST00000418224 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
PMS1-206ENST00000418224 L1TD1Q5T7N2 865 aaKnown RBP22.62■■□□□ 1.21
PMS1-206ENST00000418224 PTPRGP23470 1445 aa22.61■■□□□ 1.21
PMS1-206ENST00000418224 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
PMS1-206ENST00000418224 CENPQQ7L2Z9 268 aaPredicted RBP22.6■■□□□ 1.21
PMS1-206ENST00000418224 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
PMS1-206ENST00000418224 KDM2BQ8NHM5 1336 aa22.59■■□□□ 1.21
PMS1-206ENST00000418224 TESK2Q96S53 571 aa22.57■■□□□ 1.2
PMS1-206ENST00000418224 TMF1P82094 1093 aa22.57■■□□□ 1.2
PMS1-206ENST00000418224 RRP9O43818 475 aaKnown RBP22.56■■□□□ 1.2
PMS1-206ENST00000418224 GZF1Q9H116 711 aaPredicted RBP22.56■■□□□ 1.2
PMS1-206ENST00000418224 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
PMS1-206ENST00000418224 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
PMS1-206ENST00000418224 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
PMS1-206ENST00000418224 CCDC141Q6ZP82 1450 aa22.54■■□□□ 1.2
PMS1-206ENST00000418224 PANK2Q9BZ23 570 aa22.54■■□□□ 1.2
PMS1-206ENST00000418224 ERBINQ96RT1 1412 aa22.53■■□□□ 1.2
PMS1-206ENST00000418224 XRCC6P12956 609 aaKnown RBP eCLIP22.53■■□□□ 1.2
PMS1-206ENST00000418224 ABCA8O94911 1581 aa22.53■■□□□ 1.2
PMS1-206ENST00000418224 A2MP01023 1474 aa22.52■■□□□ 1.2
PMS1-206ENST00000418224 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
PMS1-206ENST00000418224 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
PMS1-206ENST00000418224 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
PMS1-206ENST00000418224 GOLGA6L3A6NEY3 463 aa22.5■■□□□ 1.19
PMS1-206ENST00000418224 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
PMS1-206ENST00000418224 CLCN1P35523 988 aa22.49■■□□□ 1.19
PMS1-206ENST00000418224 PLA2R1Q13018 1463 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms