RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
SLC13A3-205ENST00000417157 NPATQ14207 1427 aa21.84■■□□□ 1.09
SLC13A3-205ENST00000417157 UHRF1BP1Q6BDS2 1440 aa21.84■■□□□ 1.09
SLC13A3-205ENST00000417157 ERBINQ96RT1 1412 aa21.84■■□□□ 1.09
SLC13A3-205ENST00000417157 RNF17Q9BXT8 1623 aaKnown RBP21.81■■□□□ 1.08
SLC13A3-205ENST00000417157 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
SLC13A3-205ENST00000417157 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
SLC13A3-205ENST00000417157 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
SLC13A3-205ENST00000417157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.77■■□□□ 1.08
SLC13A3-205ENST00000417157 ZC3H13Q5T200 1668 aaKnown RBP21.77■■□□□ 1.08
SLC13A3-205ENST00000417157 SETD1BQ9UPS6 1966 aaKnown RBP21.76■■□□□ 1.07
SLC13A3-205ENST00000417157 NCOA1Q15788 1441 aa21.76■■□□□ 1.07
SLC13A3-205ENST00000417157 PPARGC1BQ86YN6 1023 aaKnown RBP21.76■■□□□ 1.07
SLC13A3-205ENST00000417157 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
SLC13A3-205ENST00000417157 PTPRKQ15262 1439 aa21.75■■□□□ 1.07
SLC13A3-205ENST00000417157 PZPP20742 1482 aa21.73■■□□□ 1.07
SLC13A3-205ENST00000417157 HSPA2P54652 639 aa21.73■■□□□ 1.07
SLC13A3-205ENST00000417157 PRDM15P57071 1507 aaPredicted RBP21.73■■□□□ 1.07
SLC13A3-205ENST00000417157 ABCC3O15438 1527 aa21.71■■□□□ 1.07
SLC13A3-205ENST00000417157 MROH1Q8NDA8 1641 aa21.71■■□□□ 1.07
SLC13A3-205ENST00000417157 KANK1Q14678 1352 aa21.7■■□□□ 1.06
SLC13A3-205ENST00000417157 ROCK1Q13464 1354 aa21.69■■□□□ 1.06
SLC13A3-205ENST00000417157 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
SLC13A3-205ENST00000417157 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
SLC13A3-205ENST00000417157 DEPDC5O75140 1603 aa21.68■■□□□ 1.06
SLC13A3-205ENST00000417157 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
SLC13A3-205ENST00000417157 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
SLC13A3-205ENST00000417157 TNRQ92752 1358 aa21.65■■□□□ 1.06
SLC13A3-205ENST00000417157 CEP170BQ9Y4F5 1589 aaPredicted RBP21.65■■□□□ 1.06
SLC13A3-205ENST00000417157 CAMSAP1Q5T5Y3 1602 aa21.63■■□□□ 1.05
SLC13A3-205ENST00000417157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.056e-8■■■■■ 27.7
SLC13A3-205ENST00000417157 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
SLC13A3-205ENST00000417157 ARHGAP31Q2M1Z3 1444 aa21.62■■□□□ 1.05
SLC13A3-205ENST00000417157 CEP152O94986 1710 aa21.61■■□□□ 1.05
SLC13A3-205ENST00000417157 A2ML1A8K2U0 1454 aa21.61■■□□□ 1.05
SLC13A3-205ENST00000417157 ITGAEP38570 1179 aa21.61■■□□□ 1.05
SLC13A3-205ENST00000417157 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
SLC13A3-205ENST00000417157 NLRP1Q9C000 1473 aa21.6■■□□□ 1.05
SLC13A3-205ENST00000417157 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
SLC13A3-205ENST00000417157 SPATA31D1Q6ZQQ2 1576 aa21.59■■□□□ 1.05
SLC13A3-205ENST00000417157 ERVK-7P63135 1459 aa21.58■■□□□ 1.05
SLC13A3-205ENST00000417157 PLA2R1Q13018 1463 aa21.58■■□□□ 1.05
SLC13A3-205ENST00000417157 VWDEQ8N2E2 1590 aa21.58■■□□□ 1.05
SLC13A3-205ENST00000417157 UNC13BO14795 1591 aa21.53■■□□□ 1.04
SLC13A3-205ENST00000417157 STRCQ7RTU9 1775 aa21.53■■□□□ 1.04
SLC13A3-205ENST00000417157 PTPRTO14522 1441 aa21.53■■□□□ 1.04
SLC13A3-205ENST00000417157 EFCAB6Q5THR3 1501 aa21.52■■□□□ 1.04
SLC13A3-205ENST00000417157 PKD2Q13563 968 aa21.52■■□□□ 1.04
SLC13A3-205ENST00000417157 UGGT1Q9NYU2 1555 aa21.51■■□□□ 1.03
SLC13A3-205ENST00000417157 RPRD2Q5VT52 1461 aaKnown RBP21.5■■□□□ 1.03
SLC13A3-205ENST00000417157 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
SLC13A3-205ENST00000417157 TET3O43151 1660 aa21.47■■□□□ 1.03
SLC13A3-205ENST00000417157 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
SLC13A3-205ENST00000417157 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
SLC13A3-205ENST00000417157 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
SLC13A3-205ENST00000417157 NUP155O75694 1391 aa21.43■■□□□ 1.02
SLC13A3-205ENST00000417157 HFM1A2PYH4 1435 aa21.43■■□□□ 1.02
SLC13A3-205ENST00000417157 NOS1P29475 1434 aa21.42■■□□□ 1.02
SLC13A3-205ENST00000417157 NAIPQ13075 1403 aa21.42■■□□□ 1.02
SLC13A3-205ENST00000417157 ANKLE2Q86XL3 938 aa21.41■■□□□ 1.02
SLC13A3-205ENST00000417157 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
SLC13A3-205ENST00000417157 SLC52A1Q9NWF4 448 aa21.39■■□□□ 1.01
SLC13A3-205ENST00000417157 STAG3Q9UJ98 1225 aa21.38■■□□□ 1.01
SLC13A3-205ENST00000417157 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
SLC13A3-205ENST00000417157 SYNMO15061 1565 aa21.37■■□□□ 1.01
SLC13A3-205ENST00000417157 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
SLC13A3-205ENST00000417157 CFAP65Q6ZU64 1925 aaKnown RBP21.36■■□□□ 1.01
SLC13A3-205ENST00000417157 PIK3C2BO00750 1634 aa21.36■■□□□ 1.01
SLC13A3-205ENST00000417157 NEURL4Q96JN8 1562 aa21.35■■□□□ 1.01
SLC13A3-205ENST00000417157 MED14O60244 1454 aa21.34■■□□□ 1.01
SLC13A3-205ENST00000417157 SLIT1O75093 1534 aa21.34■■□□□ 1.01
SLC13A3-205ENST00000417157 E9PCH4 1651 aa21.34■■□□□ 1.01
SLC13A3-205ENST00000417157 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1.01
SLC13A3-205ENST00000417157 IDI1Q13907 227 aa21.33■■□□□ 1.01
SLC13A3-205ENST00000417157 ADGRB3O60242 1522 aa21.33■■□□□ 1
SLC13A3-205ENST00000417157 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
SLC13A3-205ENST00000417157 CERKQ8TCT0 537 aa21.32■■□□□ 1
SLC13A3-205ENST00000417157 EID1Q9Y6B2 187 aa21.31■■□□□ 1
SLC13A3-205ENST00000417157 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
SLC13A3-205ENST00000417157 TMEM2Q9UHN6 1383 aa21.3■■□□□ 1
SLC13A3-205ENST00000417157 FBXO41Q8TF61 875 aa21.29■■□□□ 1
SLC13A3-205ENST00000417157 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
SLC13A3-205ENST00000417157 IQGAP1P46940 1657 aa21.28■■□□□ 1
SLC13A3-205ENST00000417157 LTBP4Q8N2S1 1624 aa21.27■■□□□ 1
SLC13A3-205ENST00000417157 TRIM52Q96A61 297 aa21.27■■□□□ 1
SLC13A3-205ENST00000417157 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
SLC13A3-205ENST00000417157 IQSEC2Q5JU85 1478 aa21.26■□□□□ 0.99
SLC13A3-205ENST00000417157 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
SLC13A3-205ENST00000417157 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
SLC13A3-205ENST00000417157 HDGFP51858 240 aaKnown RBP21.23■□□□□ 0.99
SLC13A3-205ENST00000417157 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
SLC13A3-205ENST00000417157 CPS1P31327 1500 aa21.21■□□□□ 0.99
SLC13A3-205ENST00000417157 LTKP29376 864 aa21.21■□□□□ 0.99
SLC13A3-205ENST00000417157 TMEM131LA2VDJ0 1609 aa21.2■□□□□ 0.98
SLC13A3-205ENST00000417157 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
SLC13A3-205ENST00000417157 CHGAP10645 457 aaKnown RBP21.19■□□□□ 0.98
SLC13A3-205ENST00000417157 TRPM2O94759 1503 aa21.19■□□□□ 0.98
SLC13A3-205ENST00000417157 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
SLC13A3-205ENST00000417157 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
SLC13A3-205ENST00000417157 ZFYVE9O95405 1425 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms