RNA–Protein interactions for RNA: ENST00000416065.1

RABEPK-205, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 3

Gene RABEPK, Length 733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-205ENST00000416065 RTEL1-TNFRSF6BF6WH68 1400 aa20.33■□□□□ 0.84
RABEPK-205ENST00000416065 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
RABEPK-205ENST00000416065 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
RABEPK-205ENST00000416065 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
RABEPK-205ENST00000416065 RGS17Q9UGC6 210 aaPredicted RBP20.3■□□□□ 0.84
RABEPK-205ENST00000416065 FAM135AQ9P2D6 1515 aa20.29■□□□□ 0.84
RABEPK-205ENST00000416065 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
RABEPK-205ENST00000416065 RSPH4AQ5TD94 716 aa20.28■□□□□ 0.84
RABEPK-205ENST00000416065 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
RABEPK-205ENST00000416065 ALKQ9UM73 1620 aa20.27■□□□□ 0.84
RABEPK-205ENST00000416065 NEURL4Q96JN8 1562 aa20.26■□□□□ 0.83
RABEPK-205ENST00000416065 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
RABEPK-205ENST00000416065 VWDEQ8N2E2 1590 aa20.24■□□□□ 0.83
RABEPK-205ENST00000416065 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
RABEPK-205ENST00000416065 CCDC141Q6ZP82 1450 aa20.23■□□□□ 0.83
RABEPK-205ENST00000416065 GGT6Q6P531 493 aa20.21■□□□□ 0.83
RABEPK-205ENST00000416065 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
RABEPK-205ENST00000416065 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
RABEPK-205ENST00000416065 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
RABEPK-205ENST00000416065 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
RABEPK-205ENST00000416065 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
RABEPK-205ENST00000416065 APLP2Q06481 763 aa20.17■□□□□ 0.82
RABEPK-205ENST00000416065 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
RABEPK-205ENST00000416065 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
RABEPK-205ENST00000416065 TNRQ92752 1358 aa20.17■□□□□ 0.82
RABEPK-205ENST00000416065 NPHP4O75161 1426 aaPredicted RBP20.17■□□□□ 0.82
RABEPK-205ENST00000416065 MED14O60244 1454 aa20.17■□□□□ 0.82
RABEPK-205ENST00000416065 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
RABEPK-205ENST00000416065 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
RABEPK-205ENST00000416065 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
RABEPK-205ENST00000416065 SYNMO15061 1565 aa20.16■□□□□ 0.82
RABEPK-205ENST00000416065 LRRC7Q96NW7 1537 aa20.15■□□□□ 0.82
RABEPK-205ENST00000416065 DEPDC5O75140 1603 aa20.15■□□□□ 0.82
RABEPK-205ENST00000416065 KDM5DQ9BY66 1539 aa20.14■□□□□ 0.81
RABEPK-205ENST00000416065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.12■□□□□ 0.81
RABEPK-205ENST00000416065 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
RABEPK-205ENST00000416065 PZPP20742 1482 aa20.11■□□□□ 0.81
RABEPK-205ENST00000416065 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
RABEPK-205ENST00000416065 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
RABEPK-205ENST00000416065 IQGAP1P46940 1657 aa20.1■□□□□ 0.81
RABEPK-205ENST00000416065 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
RABEPK-205ENST00000416065 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
RABEPK-205ENST00000416065 MIA2Q96PC5 1412 aa20.08■□□□□ 0.8
RABEPK-205ENST00000416065 KIF3BO15066 747 aa20.07■□□□□ 0.8
RABEPK-205ENST00000416065 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
RABEPK-205ENST00000416065 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
RABEPK-205ENST00000416065 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
RABEPK-205ENST00000416065 STRCP1A6NGW2 1772 aa20.04■□□□□ 0.8
RABEPK-205ENST00000416065 FBXO31Q5XUX0 539 aaPredicted RBP20.04■□□□□ 0.8
RABEPK-205ENST00000416065 WASHC2CQ9Y4E1 1318 aa20.03■□□□□ 0.8
RABEPK-205ENST00000416065 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
RABEPK-205ENST00000416065 SETD1AO15047 1707 aaKnown RBP20.03■□□□□ 0.8
RABEPK-205ENST00000416065 MYOM3Q5VTT5 1437 aa20.02■□□□□ 0.79
RABEPK-205ENST00000416065 UPF1Q92900 1129 aaKnown RBP eCLIP19.98■□□□□ 0.79
RABEPK-205ENST00000416065 ABCC3O15438 1527 aa19.96■□□□□ 0.79
RABEPK-205ENST00000416065 DUOX2Q9NRD8 1548 aa19.96■□□□□ 0.79
RABEPK-205ENST00000416065 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
RABEPK-205ENST00000416065 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
RABEPK-205ENST00000416065 MROH1Q8NDA8 1641 aa19.9■□□□□ 0.78
RABEPK-205ENST00000416065 CROCC2H7BZ55 1655 aa19.9■□□□□ 0.78
RABEPK-205ENST00000416065 PRDM15P57071 1507 aaPredicted RBP19.89■□□□□ 0.77
RABEPK-205ENST00000416065 ERVK-7P63135 1459 aa19.89■□□□□ 0.77
RABEPK-205ENST00000416065 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
RABEPK-205ENST00000416065 ARHGAP31Q2M1Z3 1444 aa19.88■□□□□ 0.77
RABEPK-205ENST00000416065 SCAF11Q99590 1463 aaKnown RBP19.87■□□□□ 0.77
RABEPK-205ENST00000416065 ROBO1Q9Y6N7 1651 aa19.87■□□□□ 0.77
RABEPK-205ENST00000416065 JCADQ9P266 1359 aa19.86■□□□□ 0.77
RABEPK-205ENST00000416065 ZNF772Q68DY9 489 aaPredicted RBP19.86■□□□□ 0.77
RABEPK-205ENST00000416065 PTPN23Q9H3S7 1636 aa19.86■□□□□ 0.77
RABEPK-205ENST00000416065 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
RABEPK-205ENST00000416065 CEP152O94986 1710 aa19.83■□□□□ 0.77
RABEPK-205ENST00000416065 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
RABEPK-205ENST00000416065 ABCC5O15440 1437 aa19.82■□□□□ 0.76
RABEPK-205ENST00000416065 DAPK1P53355 1430 aa19.81■□□□□ 0.76
RABEPK-205ENST00000416065 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
RABEPK-205ENST00000416065 UBR1Q8IWV7 1749 aa19.81■□□□□ 0.76
RABEPK-205ENST00000416065 TMEM94Q12767 1356 aa19.81■□□□□ 0.76
RABEPK-205ENST00000416065 TXNDC2Q86VQ3 553 aa19.8■□□□□ 0.76
RABEPK-205ENST00000416065 SRCAPQ6ZRS2 3230 aa19.8■□□□□ 0.76
RABEPK-205ENST00000416065 KANK1Q14678 1352 aa19.8■□□□□ 0.76
RABEPK-205ENST00000416065 KDM5AP29375 1690 aaKnown RBP19.79■□□□□ 0.76
RABEPK-205ENST00000416065 EID1Q9Y6B2 187 aa19.79■□□□□ 0.76
RABEPK-205ENST00000416065 SLIT1O75093 1534 aa19.78■□□□□ 0.76
RABEPK-205ENST00000416065 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
RABEPK-205ENST00000416065 ANKRD30AQ9BXX3 1397 aa19.78■□□□□ 0.76
RABEPK-205ENST00000416065 SPATA31A6Q5VVP1 1343 aa19.77■□□□□ 0.76
RABEPK-205ENST00000416065 LMTK2Q8IWU2 1503 aa19.77■□□□□ 0.76
RABEPK-205ENST00000416065 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
RABEPK-205ENST00000416065 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.76
RABEPK-205ENST00000416065 ARHGAP23Q9P227 1491 aa19.77■□□□□ 0.76
RABEPK-205ENST00000416065 RXRBP28702 533 aa19.76■□□□□ 0.75
RABEPK-205ENST00000416065 LTKP29376 864 aa19.75■□□□□ 0.75
RABEPK-205ENST00000416065 KCNA6P17658 529 aa19.74■□□□□ 0.75
RABEPK-205ENST00000416065 FOXD1Q16676 465 aa19.74■□□□□ 0.75
RABEPK-205ENST00000416065 PROSER2Q86WR7 435 aaPredicted RBP19.74■□□□□ 0.75
RABEPK-205ENST00000416065 ADGRL2O95490 1459 aa19.73■□□□□ 0.75
RABEPK-205ENST00000416065 MSH6P52701 1360 aa19.72■□□□□ 0.75
RABEPK-205ENST00000416065 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
RABEPK-205ENST00000416065 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
RABEPK-205ENST00000416065 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms