RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NBR1Q14596 966 aa23.55■■□□□ 1.36
SDCBP-202ENST00000413219 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
SDCBP-202ENST00000413219 CARMIL2Q6F5E8 1435 aa23.55■■□□□ 1.36
SDCBP-202ENST00000413219 INSRP06213 1382 aa23.54■■□□□ 1.36
SDCBP-202ENST00000413219 PARD3Q8TEW0 1356 aa23.53■■□□□ 1.36
SDCBP-202ENST00000413219 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
SDCBP-202ENST00000413219 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
SDCBP-202ENST00000413219 ZMYM4Q5VZL5 1548 aa23.52■■□□□ 1.36
SDCBP-202ENST00000413219 ARHGEF5Q12774 1597 aa23.51■■□□□ 1.35
SDCBP-202ENST00000413219 RTL5Q5HYW3 569 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-202ENST00000413219 MS4A1P11836 297 aa23.49■■□□□ 1.35
SDCBP-202ENST00000413219 TSPY4P0CV99 314 aa23.48■■□□□ 1.35
SDCBP-202ENST00000413219 TSPY10P0CW01 314 aa23.48■■□□□ 1.35
SDCBP-202ENST00000413219 EXOC6Q8TAG9 804 aa23.48■■□□□ 1.35
SDCBP-202ENST00000413219 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
SDCBP-202ENST00000413219 ABCA8O94911 1581 aa23.47■■□□□ 1.35
SDCBP-202ENST00000413219 PLEKHD1A6NEE1 506 aa23.47■■□□□ 1.35
SDCBP-202ENST00000413219 DCAF11Q8TEB1 546 aa23.47■■□□□ 1.35
SDCBP-202ENST00000413219 TRPM1Q7Z4N2 1603 aa23.47■■□□□ 1.35
SDCBP-202ENST00000413219 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
SDCBP-202ENST00000413219 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.35
SDCBP-202ENST00000413219 PRAG1Q86YV5 1406 aa23.45■■□□□ 1.35
SDCBP-202ENST00000413219 LAMC1P11047 1609 aa23.45■■□□□ 1.34
SDCBP-202ENST00000413219 GPRASP1Q5JY77 1395 aa23.44■■□□□ 1.34
SDCBP-202ENST00000413219 NUP160Q12769 1436 aa23.43■■□□□ 1.34
SDCBP-202ENST00000413219 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
SDCBP-202ENST00000413219 ATP10BO94823 1461 aa23.42■■□□□ 1.34
SDCBP-202ENST00000413219 FAM135AQ9P2D6 1515 aa23.42■■□□□ 1.34
SDCBP-202ENST00000413219 PER1O15534 1290 aaPredicted RBP23.4■■□□□ 1.34
SDCBP-202ENST00000413219 PDE4AP27815 886 aa23.4■■□□□ 1.34
SDCBP-202ENST00000413219 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
SDCBP-202ENST00000413219 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
SDCBP-202ENST00000413219 BACH2Q9BYV9 841 aa23.4■■□□□ 1.34
SDCBP-202ENST00000413219 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
SDCBP-202ENST00000413219 PLEKHH2Q8IVE3 1493 aa23.39■■□□□ 1.34
SDCBP-202ENST00000413219 JPH4Q96JJ6 628 aa23.39■■□□□ 1.33
SDCBP-202ENST00000413219 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
SDCBP-202ENST00000413219 CCDC144AA2RUR9 1427 aa23.37■■□□□ 1.33
SDCBP-202ENST00000413219 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
SDCBP-202ENST00000413219 PRDM15P57071 1507 aaPredicted RBP23.36■■□□□ 1.33
SDCBP-202ENST00000413219 RSPH4AQ5TD94 716 aa23.36■■□□□ 1.33
SDCBP-202ENST00000413219 UNC13BO14795 1591 aa23.33■■□□□ 1.33
SDCBP-202ENST00000413219 EIF2AK4Q9P2K8 1649 aaKnown RBP23.32■■□□□ 1.32
SDCBP-202ENST00000413219 HNRNPMP52272 730 aaKnown RBP eCLIP23.31■■□□□ 1.32
SDCBP-202ENST00000413219 SAMD9LQ8IVG5 1584 aa23.3■■□□□ 1.32
SDCBP-202ENST00000413219 A2MP01023 1474 aa23.3■■□□□ 1.32
SDCBP-202ENST00000413219 NPM2Q86SE8 214 aaKnown RBP23.3■■□□□ 1.32
SDCBP-202ENST00000413219 MAST1Q9Y2H9 1570 aa23.3■■□□□ 1.32
SDCBP-202ENST00000413219 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
SDCBP-202ENST00000413219 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
SDCBP-202ENST00000413219 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
SDCBP-202ENST00000413219 TESK2Q96S53 571 aa23.28■■□□□ 1.32
SDCBP-202ENST00000413219 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
SDCBP-202ENST00000413219 PLA2R1Q13018 1463 aa23.28■■□□□ 1.32
SDCBP-202ENST00000413219 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
SDCBP-202ENST00000413219 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
SDCBP-202ENST00000413219 NBPF1Q3BBV0 1214 aa23.26■■□□□ 1.31
SDCBP-202ENST00000413219 DDRGK1Q96HY6 314 aa23.26■■□□□ 1.31
SDCBP-202ENST00000413219 CDC42BPBQ9Y5S2 1711 aa23.25■■□□□ 1.31
SDCBP-202ENST00000413219 ATP10AO60312 1499 aa23.24■■□□□ 1.31
SDCBP-202ENST00000413219 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
SDCBP-202ENST00000413219 TMF1P82094 1093 aa23.22■■□□□ 1.31
SDCBP-202ENST00000413219 CRBNQ96SW2 442 aa23.22■■□□□ 1.31
SDCBP-202ENST00000413219 PANK3Q9H999 370 aa23.22■■□□□ 1.31
SDCBP-202ENST00000413219 NEFMP07197 916 aa23.21■■□□□ 1.31
SDCBP-202ENST00000413219 CC2D1BQ5T0F9 858 aaKnown RBP23.21■■□□□ 1.31
SDCBP-202ENST00000413219 MYO5CQ9NQX4 1742 aa23.2■■□□□ 1.31
SDCBP-202ENST00000413219 FBLN2P98095 1184 aa23.2■■□□□ 1.3
SDCBP-202ENST00000413219 PLXNC1O60486 1568 aa23.2■■□□□ 1.3
SDCBP-202ENST00000413219 RNF17Q9BXT8 1623 aaKnown RBP23.2■■□□□ 1.3
SDCBP-202ENST00000413219 PLIN1O60240 522 aa23.18■■□□□ 1.3
SDCBP-202ENST00000413219 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
SDCBP-202ENST00000413219 KDM2BQ8NHM5 1336 aa23.17■■□□□ 1.3
SDCBP-202ENST00000413219 LAS1LQ9Y4W2 734 aaKnown RBP23.17■■□□□ 1.3
SDCBP-202ENST00000413219 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
SDCBP-202ENST00000413219 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
SDCBP-202ENST00000413219 CENPQQ7L2Z9 268 aaPredicted RBP23.13■■□□□ 1.29
SDCBP-202ENST00000413219 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
SDCBP-202ENST00000413219 DUOX2Q9NRD8 1548 aa23.11■■□□□ 1.29
SDCBP-202ENST00000413219 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
SDCBP-202ENST00000413219 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
SDCBP-202ENST00000413219 ADAMTS8Q9UP79 889 aa23.1■■□□□ 1.29
SDCBP-202ENST00000413219 ARHGAP5Q13017 1502 aa23.09■■□□□ 1.29
SDCBP-202ENST00000413219 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
SDCBP-202ENST00000413219 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
SDCBP-202ENST00000413219 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.08■■□□□ 1.29
SDCBP-202ENST00000413219 C20orf194Q5TEA3 1177 aa23.07■■□□□ 1.28
SDCBP-202ENST00000413219 SYNMO15061 1565 aa23.07■■□□□ 1.28
SDCBP-202ENST00000413219 PLEKHH1Q9ULM0 1364 aa23.06■■□□□ 1.28
SDCBP-202ENST00000413219 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
SDCBP-202ENST00000413219 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
SDCBP-202ENST00000413219 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
SDCBP-202ENST00000413219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.06■■□□□ 1.28
SDCBP-202ENST00000413219 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
SDCBP-202ENST00000413219 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
SDCBP-202ENST00000413219 PIK3C2GO75747 1445 aa23.05■■□□□ 1.28
SDCBP-202ENST00000413219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.04■■□□□ 1.28
SDCBP-202ENST00000413219 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
SDCBP-202ENST00000413219 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
SDCBP-202ENST00000413219 CDCA8Q53HL2 280 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms