RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 PDIA4P13667 645 aaKnown RBP18.79■□□□□ 0.6
COPS7B-210ENST00000413197 NBPF8Q3BBV2 869 aa18.79■□□□□ 0.6
COPS7B-210ENST00000413197 CD109Q6YHK3 1445 aa18.79■□□□□ 0.6
COPS7B-210ENST00000413197 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
COPS7B-210ENST00000413197 DIP2BQ9P265 1576 aa18.79■□□□□ 0.6
COPS7B-210ENST00000413197 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
COPS7B-210ENST00000413197 DAPK1P53355 1430 aa18.78■□□□□ 0.6
COPS7B-210ENST00000413197 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
COPS7B-210ENST00000413197 MBD5Q9P267 1494 aa18.78■□□□□ 0.6
COPS7B-210ENST00000413197 FANCAO15360 1455 aa18.77■□□□□ 0.59
COPS7B-210ENST00000413197 ROCK1Q13464 1354 aa18.76■□□□□ 0.59
COPS7B-210ENST00000413197 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
COPS7B-210ENST00000413197 DNMT1P26358 1616 aaKnown RBP18.76■□□□□ 0.59
COPS7B-210ENST00000413197 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
COPS7B-210ENST00000413197 FOXD1Q16676 465 aa18.74■□□□□ 0.59
COPS7B-210ENST00000413197 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
COPS7B-210ENST00000413197 NOP58Q9Y2X3 529 aaKnown RBP18.74■□□□□ 0.59
COPS7B-210ENST00000413197 TRAPPC8Q9Y2L5 1435 aa18.73■□□□□ 0.59
COPS7B-210ENST00000413197 TSPOAP1O95153 1857 aa18.73■□□□□ 0.59
COPS7B-210ENST00000413197 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
COPS7B-210ENST00000413197 AFAP1Q8N556 730 aa18.73■□□□□ 0.59
COPS7B-210ENST00000413197 KIF13AQ9H1H9 1805 aa18.72■□□□□ 0.59
COPS7B-210ENST00000413197 MAP3K4Q9Y6R4 1608 aa18.72■□□□□ 0.59
COPS7B-210ENST00000413197 DHX29Q7Z478 1369 aaKnown RBP18.71■□□□□ 0.59
COPS7B-210ENST00000413197 ABCC1P33527 1531 aa18.71■□□□□ 0.59
COPS7B-210ENST00000413197 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
COPS7B-210ENST00000413197 GLI2P10070 1586 aa18.68■□□□□ 0.58
COPS7B-210ENST00000413197 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
COPS7B-210ENST00000413197 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
COPS7B-210ENST00000413197 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
COPS7B-210ENST00000413197 SCAPERQ9BY12 1400 aa18.67■□□□□ 0.58
COPS7B-210ENST00000413197 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
COPS7B-210ENST00000413197 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
COPS7B-210ENST00000413197 CCDC141Q6ZP82 1450 aa18.66■□□□□ 0.58
COPS7B-210ENST00000413197 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
COPS7B-210ENST00000413197 RAPGEF3O95398 923 aa18.65■□□□□ 0.58
COPS7B-210ENST00000413197 KIAA1107Q9UPP5 1409 aa18.65■□□□□ 0.58
COPS7B-210ENST00000413197 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
COPS7B-210ENST00000413197 ARHGEF5Q12774 1597 aa18.65■□□□□ 0.58
COPS7B-210ENST00000413197 PKNOX2Q96KN3 472 aa18.64■□□□□ 0.58
COPS7B-210ENST00000413197 TRHP20396 242 aaPredicted RBP18.62■□□□□ 0.57
COPS7B-210ENST00000413197 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
COPS7B-210ENST00000413197 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
COPS7B-210ENST00000413197 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
COPS7B-210ENST00000413197 BCORL1Q5H9F3 1711 aa18.61■□□□□ 0.57
COPS7B-210ENST00000413197 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
COPS7B-210ENST00000413197 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
COPS7B-210ENST00000413197 PZPP20742 1482 aa18.61■□□□□ 0.57
COPS7B-210ENST00000413197 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
COPS7B-210ENST00000413197 IPO9Q96P70 1041 aaKnown RBP18.61■□□□□ 0.57
COPS7B-210ENST00000413197 PLEKHH2Q8IVE3 1493 aa18.6■□□□□ 0.57
COPS7B-210ENST00000413197 ANP32AP39687 249 aaKnown RBP18.58■□□□□ 0.57
COPS7B-210ENST00000413197 USP47Q96K76 1375 aa18.58■□□□□ 0.56
COPS7B-210ENST00000413197 COL17A1Q9UMD9 1497 aaPredicted RBP18.58■□□□□ 0.56
COPS7B-210ENST00000413197 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.56
COPS7B-210ENST00000413197 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
COPS7B-210ENST00000413197 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
COPS7B-210ENST00000413197 KDM5CP41229 1560 aa18.57■□□□□ 0.56
COPS7B-210ENST00000413197 ADGBQ8N7X0 1667 aa18.57■□□□□ 0.56
COPS7B-210ENST00000413197 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
COPS7B-210ENST00000413197 NBR1Q14596 966 aa18.57■□□□□ 0.56
COPS7B-210ENST00000413197 SPAG9O60271 1321 aaKnown RBP18.56■□□□□ 0.56
COPS7B-210ENST00000413197 NEO1Q92859 1461 aa18.56■□□□□ 0.56
COPS7B-210ENST00000413197 PDE4CQ08493 712 aa18.55■□□□□ 0.56
COPS7B-210ENST00000413197 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
COPS7B-210ENST00000413197 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
COPS7B-210ENST00000413197 ZFYVE16Q7Z3T8 1539 aa18.55■□□□□ 0.56
COPS7B-210ENST00000413197 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
COPS7B-210ENST00000413197 RSPH4AQ5TD94 716 aa18.53■□□□□ 0.56
COPS7B-210ENST00000413197 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
COPS7B-210ENST00000413197 CFAP74Q9C0B2 1584 aa18.52■□□□□ 0.56
COPS7B-210ENST00000413197 C14orf37Q86TY3 774 aa18.52■□□□□ 0.55
COPS7B-210ENST00000413197 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
COPS7B-210ENST00000413197 UHRF1BP1Q6BDS2 1440 aa18.51■□□□□ 0.55
COPS7B-210ENST00000413197 ANKRD50Q9ULJ7 1429 aa18.51■□□□□ 0.55
COPS7B-210ENST00000413197 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
COPS7B-210ENST00000413197 MAST1Q9Y2H9 1570 aa18.51■□□□□ 0.55
COPS7B-210ENST00000413197 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
COPS7B-210ENST00000413197 INO80Q9ULG1 1556 aaPredicted RBP18.5■□□□□ 0.55
COPS7B-210ENST00000413197 KIDINS220Q9ULH0 1771 aa18.5■□□□□ 0.55
COPS7B-210ENST00000413197 ATP7AQ04656 1500 aa18.5■□□□□ 0.55
COPS7B-210ENST00000413197 RICTORQ6R327 1708 aa18.49■□□□□ 0.55
COPS7B-210ENST00000413197 RALGAPBQ86X10 1494 aa18.48■□□□□ 0.55
COPS7B-210ENST00000413197 YEATS2Q9ULM3 1422 aa18.48■□□□□ 0.55
COPS7B-210ENST00000413197 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
COPS7B-210ENST00000413197 KTN1Q86UP2 1357 aaKnown RBP18.47■□□□□ 0.55
COPS7B-210ENST00000413197 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
COPS7B-210ENST00000413197 PLXNC1O60486 1568 aa18.46■□□□□ 0.55
COPS7B-210ENST00000413197 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
COPS7B-210ENST00000413197 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
COPS7B-210ENST00000413197 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
COPS7B-210ENST00000413197 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
COPS7B-210ENST00000413197 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
COPS7B-210ENST00000413197 RRP1P56182 461 aaKnown RBP18.43■□□□□ 0.54
COPS7B-210ENST00000413197 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
COPS7B-210ENST00000413197 HECW2Q9P2P5 1572 aa18.43■□□□□ 0.54
COPS7B-210ENST00000413197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.546e-8■■□□□ 11.8
COPS7B-210ENST00000413197 MYBBP1AQ9BQG0 1328 aaKnown RBP18.42■□□□□ 0.54
COPS7B-210ENST00000413197 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
COPS7B-210ENST00000413197 PKD2Q13563 968 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms