RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 TMC2Q8TDI7 906 aa11.86□□□□□ -0.51
NR1I3-208ENST00000412844 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
NR1I3-208ENST00000412844 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
NR1I3-208ENST00000412844 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
NR1I3-208ENST00000412844 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
NR1I3-208ENST00000412844 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
NR1I3-208ENST00000412844 GLI2P10070 1586 aa11.84□□□□□ -0.51
NR1I3-208ENST00000412844 NBR1Q14596 966 aa11.84□□□□□ -0.51
NR1I3-208ENST00000412844 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
NR1I3-208ENST00000412844 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
NR1I3-208ENST00000412844 PTPRGP23470 1445 aa11.84□□□□□ -0.51
NR1I3-208ENST00000412844 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
NR1I3-208ENST00000412844 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
NR1I3-208ENST00000412844 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
NR1I3-208ENST00000412844 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
NR1I3-208ENST00000412844 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-208ENST00000412844 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
NR1I3-208ENST00000412844 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
NR1I3-208ENST00000412844 IGF1RP08069 1367 aa11.8□□□□□ -0.52
NR1I3-208ENST00000412844 E2F4Q16254 413 aa11.8□□□□□ -0.52
NR1I3-208ENST00000412844 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
NR1I3-208ENST00000412844 MFSD10Q14728 455 aa11.79□□□□□ -0.52
NR1I3-208ENST00000412844 ASXL2Q76L83 1435 aa11.78□□□□□ -0.52
NR1I3-208ENST00000412844 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
NR1I3-208ENST00000412844 PPP1R15BQ5SWA1 713 aa11.77□□□□□ -0.53
NR1I3-208ENST00000412844 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
NR1I3-208ENST00000412844 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
NR1I3-208ENST00000412844 IQGAP2Q13576 1575 aa11.75□□□□□ -0.53
NR1I3-208ENST00000412844 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
NR1I3-208ENST00000412844 C2orf72A6NCS6 295 aa11.74□□□□□ -0.53
NR1I3-208ENST00000412844 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.74□□□□□ -0.53
NR1I3-208ENST00000412844 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
NR1I3-208ENST00000412844 FOXK1P85037 733 aa11.73□□□□□ -0.53
NR1I3-208ENST00000412844 DSG2Q14126 1118 aa11.73□□□□□ -0.53
NR1I3-208ENST00000412844 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
NR1I3-208ENST00000412844 MAP3K4Q9Y6R4 1608 aa11.72□□□□□ -0.53
NR1I3-208ENST00000412844 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
NR1I3-208ENST00000412844 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
NR1I3-208ENST00000412844 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
NR1I3-208ENST00000412844 KIF3CO14782 793 aa11.69□□□□□ -0.54
NR1I3-208ENST00000412844 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
NR1I3-208ENST00000412844 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
NR1I3-208ENST00000412844 CAMK2BQ13554 666 aa11.67□□□□□ -0.54
NR1I3-208ENST00000412844 TMEM92Q6UXU6 159 aa11.67□□□□□ -0.54
NR1I3-208ENST00000412844 DISP1Q96F81 1524 aa11.66□□□□□ -0.54
NR1I3-208ENST00000412844 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
NR1I3-208ENST00000412844 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-208ENST00000412844 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
NR1I3-208ENST00000412844 ZCCHC11Q5TAX3 1644 aaKnown RBP11.65□□□□□ -0.54
NR1I3-208ENST00000412844 SCUBE2Q9NQ36 999 aa11.65□□□□□ -0.54
NR1I3-208ENST00000412844 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.55
NR1I3-208ENST00000412844 TTBK1Q5TCY1 1321 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-208ENST00000412844 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
NR1I3-208ENST00000412844 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
NR1I3-208ENST00000412844 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-208ENST00000412844 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
NR1I3-208ENST00000412844 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-208ENST00000412844 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-208ENST00000412844 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
NR1I3-208ENST00000412844 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
NR1I3-208ENST00000412844 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
NR1I3-208ENST00000412844 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
NR1I3-208ENST00000412844 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
NR1I3-208ENST00000412844 DPYSL4O14531 572 aa11.58□□□□□ -0.56
NR1I3-208ENST00000412844 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
NR1I3-208ENST00000412844 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
NR1I3-208ENST00000412844 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
NR1I3-208ENST00000412844 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
NR1I3-208ENST00000412844 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
NR1I3-208ENST00000412844 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
NR1I3-208ENST00000412844 SPDYE16A6NNV3 312 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-208ENST00000412844 TBC1D12O60347 775 aa11.54□□□□□ -0.56
NR1I3-208ENST00000412844 ABCA8O94911 1581 aa11.54□□□□□ -0.56
NR1I3-208ENST00000412844 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-208ENST00000412844 SEMA3EO15041 775 aa11.53□□□□□ -0.56
NR1I3-208ENST00000412844 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.56
NR1I3-208ENST00000412844 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
NR1I3-208ENST00000412844 KIF21BO75037 1637 aa11.5□□□□□ -0.57
NR1I3-208ENST00000412844 SLC34A2O95436 690 aa11.5□□□□□ -0.57
NR1I3-208ENST00000412844 PDIA6Q15084 440 aa11.5□□□□□ -0.57
NR1I3-208ENST00000412844 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
NR1I3-208ENST00000412844 PTCD2Q8WV60 388 aaKnown RBP11.49□□□□□ -0.57
NR1I3-208ENST00000412844 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
NR1I3-208ENST00000412844 PTPRMP28827 1452 aa11.49□□□□□ -0.57
NR1I3-208ENST00000412844 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
NR1I3-208ENST00000412844 RIMBP2O15034 1052 aa11.48□□□□□ -0.57
NR1I3-208ENST00000412844 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
NR1I3-208ENST00000412844 NEO1Q92859 1461 aa11.48□□□□□ -0.57
NR1I3-208ENST00000412844 ADAMTSL3P82987 1691 aa11.48□□□□□ -0.57
NR1I3-208ENST00000412844 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
NR1I3-208ENST00000412844 LHX8Q68G74 356 aa11.46□□□□□ -0.57
NR1I3-208ENST00000412844 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
NR1I3-208ENST00000412844 SNPHO15079 494 aa11.44□□□□□ -0.58
NR1I3-208ENST00000412844 EVI5O60447 810 aa11.43□□□□□ -0.58
NR1I3-208ENST00000412844 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
NR1I3-208ENST00000412844 ZNF710Q8N1W2 664 aa11.43□□□□□ -0.58
NR1I3-208ENST00000412844 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
NR1I3-208ENST00000412844 LMOD2Q6P5Q4 547 aa11.42□□□□□ -0.58
NR1I3-208ENST00000412844 PCDHGA4Q9Y5G9 962 aa11.42□□□□□ -0.58
NR1I3-208ENST00000412844 ATP10BO94823 1461 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms