RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
PBRM1-209ENST00000412587 FGD1P98174 961 aa10.69□□□□□ -0.7
PBRM1-209ENST00000412587 RALBP1Q15311 655 aa10.69□□□□□ -0.7
PBRM1-209ENST00000412587 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
PBRM1-209ENST00000412587 FAM69CQ0P6D2 419 aa10.68□□□□□ -0.7
PBRM1-209ENST00000412587 TERF2IPQ9NYB0 399 aa10.68□□□□□ -0.7
PBRM1-209ENST00000412587 MYOM3Q5VTT5 1437 aa10.68□□□□□ -0.7
PBRM1-209ENST00000412587 U2AF1L5P0DN76 240 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-209ENST00000412587 U2AF1Q01081 240 aaKnown RBP eCLIP10.68□□□□□ -0.7
PBRM1-209ENST00000412587 TRAK1Q9UPV9 953 aa10.67□□□□□ -0.7
PBRM1-209ENST00000412587 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
PBRM1-209ENST00000412587 MRE11P49959 708 aa10.67□□□□□ -0.7
PBRM1-209ENST00000412587 BCL11BQ9C0K0 894 aaPredicted RBP10.67□□□□□ -0.7
PBRM1-209ENST00000412587 RTF1Q92541 710 aaKnown RBP10.67□□□□□ -0.7
PBRM1-209ENST00000412587 ZNF644Q9H582 1327 aaPredicted RBP10.67□□□□□ -0.7
PBRM1-209ENST00000412587 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
PBRM1-209ENST00000412587 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
PBRM1-209ENST00000412587 CCDC66A2RUB6 948 aa10.66□□□□□ -0.7
PBRM1-209ENST00000412587 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-209ENST00000412587 DDX11L8A8MPP1 907 aa10.65□□□□□ -0.7
PBRM1-209ENST00000412587 IFT140Q96RY7 1462 aa10.65□□□□□ -0.7
PBRM1-209ENST00000412587 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
PBRM1-209ENST00000412587 SYNJ1O43426 1573 aa10.65□□□□□ -0.7
PBRM1-209ENST00000412587 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.71
PBRM1-209ENST00000412587 NGDNQ8NEJ9 315 aaKnown RBP10.65□□□□□ -0.71
PBRM1-209ENST00000412587 FGD6Q6ZV73 1430 aa10.65□□□□□ -0.71
PBRM1-209ENST00000412587 UACAQ9BZF9 1416 aa10.64□□□□□ -0.71
PBRM1-209ENST00000412587 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
PBRM1-209ENST00000412587 NPHP1O15259 732 aa10.64□□□□□ -0.71
PBRM1-209ENST00000412587 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
PBRM1-209ENST00000412587 KIF21BO75037 1637 aa10.64□□□□□ -0.71
PBRM1-209ENST00000412587 HSP90AB1P08238 724 aaKnown RBP10.63□□□□□ -0.71
PBRM1-209ENST00000412587 CASKIN1Q8WXD9 1431 aa10.63□□□□□ -0.71
PBRM1-209ENST00000412587 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
PBRM1-209ENST00000412587 PRG4Q92954 1404 aaPredicted RBP10.63□□□□□ -0.71
PBRM1-209ENST00000412587 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
PBRM1-209ENST00000412587 NAP1L2Q9ULW6 460 aaPredicted RBP10.63□□□□□ -0.71
PBRM1-209ENST00000412587 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
PBRM1-209ENST00000412587 KIF15Q9NS87 1388 aa10.62□□□□□ -0.71
PBRM1-209ENST00000412587 OS9Q13438 667 aaPredicted RBP10.62□□□□□ -0.71
PBRM1-209ENST00000412587 PHLDB1Q86UU1 1377 aa10.62□□□□□ -0.71
PBRM1-209ENST00000412587 R3HCC1Q9Y3T6 440 aaKnown RBP10.62□□□□□ -0.71
PBRM1-209ENST00000412587 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
PBRM1-209ENST00000412587 ERICH3Q5RHP9 1530 aa10.62□□□□□ -0.71
PBRM1-209ENST00000412587 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
PBRM1-209ENST00000412587 WASHC2AQ641Q2 1341 aa10.61□□□□□ -0.71
PBRM1-209ENST00000412587 ESPNB1AK53 854 aa10.61□□□□□ -0.71
PBRM1-209ENST00000412587 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
PBRM1-209ENST00000412587 CUX1P39880 1505 aa10.61□□□□□ -0.71
PBRM1-209ENST00000412587 FRAT2O75474 233 aaPredicted RBP10.61□□□□□ -0.71
PBRM1-209ENST00000412587 GOLGA6L6A8MZA4 724 aa10.6□□□□□ -0.71
PBRM1-209ENST00000412587 PRDM2Q13029 1718 aa10.6□□□□□ -0.71
PBRM1-209ENST00000412587 AAMPQ13685 434 aa10.6□□□□□ -0.71
PBRM1-209ENST00000412587 SKOR2Q2VWA4 1001 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-209ENST00000412587 FAM161AQ3B820 660 aa10.6□□□□□ -0.71
PBRM1-209ENST00000412587 SPRYD3Q8NCJ5 442 aa10.6□□□□□ -0.71
PBRM1-209ENST00000412587 SYNJ2O15056 1496 aa10.59□□□□□ -0.71
PBRM1-209ENST00000412587 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-209ENST00000412587 ZBED9Q6R2W3 1325 aa10.59□□□□□ -0.71
PBRM1-209ENST00000412587 NCOA2Q15596 1464 aa10.59□□□□□ -0.71
PBRM1-209ENST00000412587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
PBRM1-209ENST00000412587 AFAP1Q8N556 730 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 ZHX1Q9UKY1 873 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-209ENST00000412587 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 ARAP1Q96P48 1450 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 IPO8O15397 1037 aaKnown RBP10.58□□□□□ -0.72
PBRM1-209ENST00000412587 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
PBRM1-209ENST00000412587 FYCO1Q9BQS8 1478 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 CLCN1P35523 988 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 GOLGA6L1Q8N7Z2 621 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
PBRM1-209ENST00000412587 RCAN3Q9UKA8 241 aa10.58□□□□□ -0.72
PBRM1-209ENST00000412587 AMPHP49418 695 aa10.57□□□□□ -0.72
PBRM1-209ENST00000412587 ANKRD50Q9ULJ7 1429 aa10.57□□□□□ -0.72
PBRM1-209ENST00000412587 PANK3Q9H999 370 aa10.57□□□□□ -0.72
PBRM1-209ENST00000412587 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
PBRM1-209ENST00000412587 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
PBRM1-209ENST00000412587 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
PBRM1-209ENST00000412587 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
PBRM1-209ENST00000412587 USP47Q96K76 1375 aa10.56□□□□□ -0.72
PBRM1-209ENST00000412587 MINK1Q8N4C8 1332 aaPredicted RBP10.56□□□□□ -0.72
PBRM1-209ENST00000412587 DNMBPQ6XZF7 1577 aa10.55□□□□□ -0.72
PBRM1-209ENST00000412587 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
PBRM1-209ENST00000412587 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-209ENST00000412587 LTV1Q96GA3 475 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-209ENST00000412587 ARHGAP5Q13017 1502 aa10.54□□□□□ -0.72
PBRM1-209ENST00000412587 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
PBRM1-209ENST00000412587 TSPYL1Q9H0U9 437 aa10.54□□□□□ -0.72
PBRM1-209ENST00000412587 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
PBRM1-209ENST00000412587 EFCAB5A4FU69 1503 aa10.53□□□□□ -0.72
PBRM1-209ENST00000412587 CCDC146Q8IYE0 955 aa10.53□□□□□ -0.72
PBRM1-209ENST00000412587 CCDC9Q9Y3X0 531 aaKnown RBP10.53□□□□□ -0.72
PBRM1-209ENST00000412587 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.53□□□□□ -0.72
PBRM1-209ENST00000412587 PRDM10Q9NQV6 1147 aa10.53□□□□□ -0.72
PBRM1-209ENST00000412587 UQCRHLA0A096LP55 91 aa10.52□□□□□ -0.72
PBRM1-209ENST00000412587 UQCRHP07919 91 aa10.52□□□□□ -0.72
PBRM1-209ENST00000412587 SMAP1Q8IYB5 467 aaPredicted RBP10.52□□□□□ -0.72
PBRM1-209ENST00000412587 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms