RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 POLA2Q14181 598 aa13.11□□□□□ -0.31
AC004009.1-201ENST00000412413 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
AC004009.1-201ENST00000412413 DISP3Q9P2K9 1392 aa13.1□□□□□ -0.31
AC004009.1-201ENST00000412413 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
AC004009.1-201ENST00000412413 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
AC004009.1-201ENST00000412413 NPATQ14207 1427 aa13.08□□□□□ -0.32
AC004009.1-201ENST00000412413 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
AC004009.1-201ENST00000412413 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
AC004009.1-201ENST00000412413 KIF3BO15066 747 aa13.07□□□□□ -0.32
AC004009.1-201ENST00000412413 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
AC004009.1-201ENST00000412413 CAMSAP1Q5T5Y3 1602 aa13.06□□□□□ -0.32
AC004009.1-201ENST00000412413 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
AC004009.1-201ENST00000412413 SETD1BQ9UPS6 1966 aaKnown RBP13.05□□□□□ -0.32
AC004009.1-201ENST00000412413 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
AC004009.1-201ENST00000412413 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
AC004009.1-201ENST00000412413 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
AC004009.1-201ENST00000412413 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
AC004009.1-201ENST00000412413 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
AC004009.1-201ENST00000412413 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
AC004009.1-201ENST00000412413 LOC105371045A0A1W2PR82 267 aa13.03□□□□□ -0.32
AC004009.1-201ENST00000412413 PKD2Q13563 968 aa13.03□□□□□ -0.32
AC004009.1-201ENST00000412413 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
AC004009.1-201ENST00000412413 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
AC004009.1-201ENST00000412413 CLTCQ00610 1675 aaKnown RBP13.02□□□□□ -0.32
AC004009.1-201ENST00000412413 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.33
AC004009.1-201ENST00000412413 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
AC004009.1-201ENST00000412413 TSPY4P0CV99 314 aa13.01□□□□□ -0.33
AC004009.1-201ENST00000412413 TSPY10P0CW01 314 aa13.01□□□□□ -0.33
AC004009.1-201ENST00000412413 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
AC004009.1-201ENST00000412413 LTBP4Q8N2S1 1624 aa13.01□□□□□ -0.33
AC004009.1-201ENST00000412413 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
AC004009.1-201ENST00000412413 TNRQ92752 1358 aa13□□□□□ -0.33
AC004009.1-201ENST00000412413 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
AC004009.1-201ENST00000412413 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
AC004009.1-201ENST00000412413 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
AC004009.1-201ENST00000412413 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
AC004009.1-201ENST00000412413 MYO3AQ8NEV4 1616 aa12.98□□□□□ -0.33
AC004009.1-201ENST00000412413 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
AC004009.1-201ENST00000412413 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
AC004009.1-201ENST00000412413 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
AC004009.1-201ENST00000412413 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.34
AC004009.1-201ENST00000412413 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
AC004009.1-201ENST00000412413 ANKLE2Q86XL3 938 aa12.95□□□□□ -0.34
AC004009.1-201ENST00000412413 TCOF1Q13428 1488 aaKnown RBP12.95□□□□□ -0.34
AC004009.1-201ENST00000412413 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
AC004009.1-201ENST00000412413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC004009.1-201ENST00000412413 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
AC004009.1-201ENST00000412413 SOCS7O14512 581 aa12.93□□□□□ -0.34
AC004009.1-201ENST00000412413 THEMISQ8N1K5 641 aaPredicted RBP12.93□□□□□ -0.34
AC004009.1-201ENST00000412413 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
AC004009.1-201ENST00000412413 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
AC004009.1-201ENST00000412413 PZPP20742 1482 aa12.91□□□□□ -0.34
AC004009.1-201ENST00000412413 SPATA31D1Q6ZQQ2 1576 aa12.91□□□□□ -0.34
AC004009.1-201ENST00000412413 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
AC004009.1-201ENST00000412413 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
AC004009.1-201ENST00000412413 ZNF142P52746 1687 aaPredicted RBP12.9□□□□□ -0.34
AC004009.1-201ENST00000412413 DNMT1P26358 1616 aaKnown RBP12.9□□□□□ -0.34
AC004009.1-201ENST00000412413 TOM1O60784 492 aa12.89□□□□□ -0.35
AC004009.1-201ENST00000412413 HSPA1LP34931 641 aa12.89□□□□□ -0.35
AC004009.1-201ENST00000412413 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
AC004009.1-201ENST00000412413 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
AC004009.1-201ENST00000412413 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
AC004009.1-201ENST00000412413 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
AC004009.1-201ENST00000412413 NPHP4O75161 1426 aaPredicted RBP12.87□□□□□ -0.35
AC004009.1-201ENST00000412413 ARHGEF5Q12774 1597 aa12.86□□□□□ -0.35
AC004009.1-201ENST00000412413 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
AC004009.1-201ENST00000412413 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
AC004009.1-201ENST00000412413 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
AC004009.1-201ENST00000412413 CHIC2Q9UKJ5 165 aa12.84□□□□□ -0.35
AC004009.1-201ENST00000412413 ABCC3O15438 1527 aa12.83□□□□□ -0.35
AC004009.1-201ENST00000412413 NEURL4Q96JN8 1562 aa12.83□□□□□ -0.36
AC004009.1-201ENST00000412413 CPS1P31327 1500 aa12.83□□□□□ -0.36
AC004009.1-201ENST00000412413 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
AC004009.1-201ENST00000412413 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
AC004009.1-201ENST00000412413 ERVK-7P63135 1459 aa12.82□□□□□ -0.36
AC004009.1-201ENST00000412413 TXNDC2Q86VQ3 553 aa12.81□□□□□ -0.36
AC004009.1-201ENST00000412413 ABCC5O15440 1437 aa12.79□□□□□ -0.36
AC004009.1-201ENST00000412413 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
AC004009.1-201ENST00000412413 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
AC004009.1-201ENST00000412413 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 MAST1Q9Y2H9 1570 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 LTKP29376 864 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 KANK1Q14678 1352 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 MED14O60244 1454 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
AC004009.1-201ENST00000412413 RNF17Q9BXT8 1623 aaKnown RBP12.77□□□□□ -0.36
AC004009.1-201ENST00000412413 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
AC004009.1-201ENST00000412413 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
AC004009.1-201ENST00000412413 BCANQ96GW7 911 aa12.76□□□□□ -0.37
AC004009.1-201ENST00000412413 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
AC004009.1-201ENST00000412413 DAPK1P53355 1430 aa12.75□□□□□ -0.37
AC004009.1-201ENST00000412413 MROH1Q8NDA8 1641 aa12.75□□□□□ -0.37
AC004009.1-201ENST00000412413 LRRC7Q96NW7 1537 aa12.74□□□□□ -0.37
AC004009.1-201ENST00000412413 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
AC004009.1-201ENST00000412413 ANKRD30AQ9BXX3 1397 aa12.74□□□□□ -0.37
AC004009.1-201ENST00000412413 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
AC004009.1-201ENST00000412413 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
AC004009.1-201ENST00000412413 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
AC004009.1-201ENST00000412413 FGD6Q6ZV73 1430 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms