RNA–Protein interactions for RNA: ENST00000412119.1

LINC00354-201, long intergenic non-protein coding RNA 354, humanhuman

TSL 5 BASIC

Gene LINC00354, Length 347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-201ENST00000412119 CASKIN1Q8WXD9 1431 aa11.32□□□□□ -0.6
LINC00354-201ENST00000412119 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
LINC00354-201ENST00000412119 SPATA31D1Q6ZQQ2 1576 aa11.31□□□□□ -0.6
LINC00354-201ENST00000412119 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
LINC00354-201ENST00000412119 REREQ9P2R6 1566 aa11.31□□□□□ -0.6
LINC00354-201ENST00000412119 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
LINC00354-201ENST00000412119 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
LINC00354-201ENST00000412119 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
LINC00354-201ENST00000412119 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
LINC00354-201ENST00000412119 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00354-201ENST00000412119 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
LINC00354-201ENST00000412119 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
LINC00354-201ENST00000412119 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
LINC00354-201ENST00000412119 HSPA1LP34931 641 aa11.28□□□□□ -0.6
LINC00354-201ENST00000412119 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
LINC00354-201ENST00000412119 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
LINC00354-201ENST00000412119 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
LINC00354-201ENST00000412119 CCNB3Q8WWL7 1395 aa11.26□□□□□ -0.61
LINC00354-201ENST00000412119 NPATQ14207 1427 aa11.26□□□□□ -0.61
LINC00354-201ENST00000412119 A2MP01023 1474 aa11.25□□□□□ -0.61
LINC00354-201ENST00000412119 CCDC18Q5T9S5 1454 aa11.25□□□□□ -0.61
LINC00354-201ENST00000412119 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
LINC00354-201ENST00000412119 PKD2Q13563 968 aa11.25□□□□□ -0.61
LINC00354-201ENST00000412119 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
LINC00354-201ENST00000412119 ATP7AQ04656 1500 aa11.24□□□□□ -0.61
LINC00354-201ENST00000412119 KIF3BO15066 747 aa11.23□□□□□ -0.61
LINC00354-201ENST00000412119 TCOF1Q13428 1488 aaKnown RBP11.22□□□□□ -0.61
LINC00354-201ENST00000412119 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
LINC00354-201ENST00000412119 IQSEC2Q5JU85 1478 aa11.21□□□□□ -0.61
LINC00354-201ENST00000412119 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.61
LINC00354-201ENST00000412119 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
LINC00354-201ENST00000412119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC00354-201ENST00000412119 MYO3AQ8NEV4 1616 aa11.2□□□□□ -0.62
LINC00354-201ENST00000412119 MTUS2Q5JR59 1369 aa11.2□□□□□ -0.62
LINC00354-201ENST00000412119 PLXNC1O60486 1568 aa11.2□□□□□ -0.62
LINC00354-201ENST00000412119 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
LINC00354-201ENST00000412119 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
LINC00354-201ENST00000412119 INO80Q9ULG1 1556 aaPredicted RBP11.19□□□□□ -0.62
LINC00354-201ENST00000412119 PLA2R1Q13018 1463 aa11.19□□□□□ -0.62
LINC00354-201ENST00000412119 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
LINC00354-201ENST00000412119 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
LINC00354-201ENST00000412119 DNMT1P26358 1616 aaKnown RBP11.18□□□□□ -0.62
LINC00354-201ENST00000412119 TOM1O60784 492 aa11.18□□□□□ -0.62
LINC00354-201ENST00000412119 TNRQ92752 1358 aa11.17□□□□□ -0.62
LINC00354-201ENST00000412119 ANKLE2Q86XL3 938 aa11.17□□□□□ -0.62
LINC00354-201ENST00000412119 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
LINC00354-201ENST00000412119 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
LINC00354-201ENST00000412119 SHANK2Q9UPX8 1470 aa11.16□□□□□ -0.62
LINC00354-201ENST00000412119 PLEKHH2Q8IVE3 1493 aa11.15□□□□□ -0.62
LINC00354-201ENST00000412119 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
LINC00354-201ENST00000412119 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
LINC00354-201ENST00000412119 TIAM1Q13009 1591 aa11.14□□□□□ -0.63
LINC00354-201ENST00000412119 NEURL4Q96JN8 1562 aa11.14□□□□□ -0.63
LINC00354-201ENST00000412119 MED1Q15648 1581 aaPredicted RBP11.13□□□□□ -0.63
LINC00354-201ENST00000412119 MIA2Q96PC5 1412 aa11.13□□□□□ -0.63
LINC00354-201ENST00000412119 ALKQ9UM73 1620 aa11.12□□□□□ -0.63
LINC00354-201ENST00000412119 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
LINC00354-201ENST00000412119 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
LINC00354-201ENST00000412119 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
LINC00354-201ENST00000412119 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
LINC00354-201ENST00000412119 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
LINC00354-201ENST00000412119 RTEL1-TNFRSF6BF6WH68 1400 aa11.1□□□□□ -0.63
LINC00354-201ENST00000412119 NPHP4O75161 1426 aaPredicted RBP11.1□□□□□ -0.63
LINC00354-201ENST00000412119 RBM33Q96EV2 1170 aaKnown RBP11.1□□□□□ -0.63
LINC00354-201ENST00000412119 PZPP20742 1482 aa11.1□□□□□ -0.63
LINC00354-201ENST00000412119 ADGBQ8N7X0 1667 aa11.1□□□□□ -0.63
LINC00354-201ENST00000412119 CAMSAP2Q08AD1 1489 aa11.09□□□□□ -0.63
LINC00354-201ENST00000412119 TSPY4P0CV99 314 aa11.09□□□□□ -0.63
LINC00354-201ENST00000412119 TSPY10P0CW01 314 aa11.09□□□□□ -0.63
LINC00354-201ENST00000412119 LTKP29376 864 aa11.09□□□□□ -0.63
LINC00354-201ENST00000412119 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
LINC00354-201ENST00000412119 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
LINC00354-201ENST00000412119 NCOA2Q15596 1464 aa11.08□□□□□ -0.64
LINC00354-201ENST00000412119 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
LINC00354-201ENST00000412119 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
LINC00354-201ENST00000412119 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
LINC00354-201ENST00000412119 CPS1P31327 1500 aa11.08□□□□□ -0.64
LINC00354-201ENST00000412119 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
LINC00354-201ENST00000412119 KDM5DQ9BY66 1539 aa11.07□□□□□ -0.64
LINC00354-201ENST00000412119 STRCP1A6NGW2 1772 aa11.06□□□□□ -0.64
LINC00354-201ENST00000412119 LRRC7Q96NW7 1537 aa11.06□□□□□ -0.64
LINC00354-201ENST00000412119 POLR1AO95602 1720 aaPredicted RBP11.06□□□□□ -0.64
LINC00354-201ENST00000412119 EHBP1L1Q8N3D4 1523 aa11.05□□□□□ -0.64
LINC00354-201ENST00000412119 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
LINC00354-201ENST00000412119 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
LINC00354-201ENST00000412119 MED14O60244 1454 aa11.05□□□□□ -0.64
LINC00354-201ENST00000412119 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
LINC00354-201ENST00000412119 POTEAQ6S8J7 498 aa11.03□□□□□ -0.64
LINC00354-201ENST00000412119 RRP7BPQ9NSQ0 103 aa11.03□□□□□ -0.64
LINC00354-201ENST00000412119 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
LINC00354-201ENST00000412119 CFAP65Q6ZU64 1925 aaKnown RBP11.02□□□□□ -0.65
LINC00354-201ENST00000412119 EVX2Q03828 476 aa11.02□□□□□ -0.65
LINC00354-201ENST00000412119 SPDYE1Q8NFV5 336 aaPredicted RBP11.02□□□□□ -0.65
LINC00354-201ENST00000412119 ABCC3O15438 1527 aa11.02□□□□□ -0.65
LINC00354-201ENST00000412119 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
LINC00354-201ENST00000412119 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
LINC00354-201ENST00000412119 ERVK-7P63135 1459 aa11□□□□□ -0.65
LINC00354-201ENST00000412119 DEPDC5O75140 1603 aa10.99□□□□□ -0.65
LINC00354-201ENST00000412119 CHIC2Q9UKJ5 165 aa10.99□□□□□ -0.65
LINC00354-201ENST00000412119 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms