RNA–Protein interactions for RNA: ENST00000412119.1

LINC00354-201, long intergenic non-protein coding RNA 354, humanhuman

TSL 5 BASIC

Gene LINC00354, Length 347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-201ENST00000412119 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
LINC00354-201ENST00000412119 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
LINC00354-201ENST00000412119 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
LINC00354-201ENST00000412119 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
LINC00354-201ENST00000412119 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.4
LINC00354-201ENST00000412119 FOXD1Q16676 465 aa16.63■□□□□ 0.25
LINC00354-201ENST00000412119 ABCC9O60706 1549 aa16.14■□□□□ 0.18
LINC00354-201ENST00000412119 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
LINC00354-201ENST00000412119 MSH5O43196 834 aa15.88■□□□□ 0.13
LINC00354-201ENST00000412119 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
LINC00354-201ENST00000412119 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
LINC00354-201ENST00000412119 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
LINC00354-201ENST00000412119 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
LINC00354-201ENST00000412119 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
LINC00354-201ENST00000412119 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
LINC00354-201ENST00000412119 ADRA2BP18089 450 aa15.12■□□□□ 0.01
LINC00354-201ENST00000412119 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00354-201ENST00000412119 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
LINC00354-201ENST00000412119 NACADO15069 1562 aa14.9□□□□□ -0.02
LINC00354-201ENST00000412119 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
LINC00354-201ENST00000412119 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
LINC00354-201ENST00000412119 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
LINC00354-201ENST00000412119 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
LINC00354-201ENST00000412119 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
LINC00354-201ENST00000412119 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
LINC00354-201ENST00000412119 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
LINC00354-201ENST00000412119 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
LINC00354-201ENST00000412119 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
LINC00354-201ENST00000412119 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
LINC00354-201ENST00000412119 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
LINC00354-201ENST00000412119 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
LINC00354-201ENST00000412119 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
LINC00354-201ENST00000412119 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
LINC00354-201ENST00000412119 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
LINC00354-201ENST00000412119 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
LINC00354-201ENST00000412119 NESP48681 1621 aa13.83□□□□□ -0.2
LINC00354-201ENST00000412119 CUX2O14529 1486 aa13.81□□□□□ -0.2
LINC00354-201ENST00000412119 CACNB1Q02641 598 aaPredicted RBP13.81□□□□□ -0.2
LINC00354-201ENST00000412119 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
LINC00354-201ENST00000412119 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
LINC00354-201ENST00000412119 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
LINC00354-201ENST00000412119 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
LINC00354-201ENST00000412119 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
LINC00354-201ENST00000412119 HMGXB3Q12766 1538 aa13.63□□□□□ -0.23
LINC00354-201ENST00000412119 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
LINC00354-201ENST00000412119 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
LINC00354-201ENST00000412119 BAZ1AQ9NRL2 1556 aaPredicted RBP13.55□□□□□ -0.24
LINC00354-201ENST00000412119 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
LINC00354-201ENST00000412119 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
LINC00354-201ENST00000412119 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
LINC00354-201ENST00000412119 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
LINC00354-201ENST00000412119 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
LINC00354-201ENST00000412119 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
LINC00354-201ENST00000412119 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
LINC00354-201ENST00000412119 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
LINC00354-201ENST00000412119 WIZO95785 1651 aa13.39□□□□□ -0.27
LINC00354-201ENST00000412119 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
LINC00354-201ENST00000412119 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
LINC00354-201ENST00000412119 WDR62O43379 1518 aa13.32□□□□□ -0.28
LINC00354-201ENST00000412119 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
LINC00354-201ENST00000412119 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
LINC00354-201ENST00000412119 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
LINC00354-201ENST00000412119 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
LINC00354-201ENST00000412119 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
LINC00354-201ENST00000412119 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
LINC00354-201ENST00000412119 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
LINC00354-201ENST00000412119 CFTRP13569 1480 aa13.22□□□□□ -0.29
LINC00354-201ENST00000412119 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
LINC00354-201ENST00000412119 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
LINC00354-201ENST00000412119 TOP2AP11388 1531 aaKnown RBP13.1□□□□□ -0.31
LINC00354-201ENST00000412119 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
LINC00354-201ENST00000412119 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
LINC00354-201ENST00000412119 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
LINC00354-201ENST00000412119 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
LINC00354-201ENST00000412119 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
LINC00354-201ENST00000412119 FBLN2P98095 1184 aa13.04□□□□□ -0.32
LINC00354-201ENST00000412119 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00354-201ENST00000412119 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
LINC00354-201ENST00000412119 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
LINC00354-201ENST00000412119 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
LINC00354-201ENST00000412119 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
LINC00354-201ENST00000412119 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
LINC00354-201ENST00000412119 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
LINC00354-201ENST00000412119 RAD54L2Q9Y4B4 1467 aa12.92□□□□□ -0.34
LINC00354-201ENST00000412119 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
LINC00354-201ENST00000412119 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
LINC00354-201ENST00000412119 CHD1O14646 1710 aa12.88□□□□□ -0.35
LINC00354-201ENST00000412119 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
LINC00354-201ENST00000412119 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
LINC00354-201ENST00000412119 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
LINC00354-201ENST00000412119 SOGA1O94964 1423 aa12.86□□□□□ -0.35
LINC00354-201ENST00000412119 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
LINC00354-201ENST00000412119 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
LINC00354-201ENST00000412119 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
LINC00354-201ENST00000412119 SNAPC4Q5SXM2 1469 aa12.8□□□□□ -0.36
LINC00354-201ENST00000412119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00354-201ENST00000412119 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
LINC00354-201ENST00000412119 CUX1P39880 1505 aa12.74□□□□□ -0.37
LINC00354-201ENST00000412119 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
LINC00354-201ENST00000412119 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms