RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
BRCC3-207ENST00000411985 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
BRCC3-207ENST00000411985 CEBPAP49715 358 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-207ENST00000411985 SHANK2Q9UPX8 1470 aa14.36□□□□□ -0.11
BRCC3-207ENST00000411985 KDM5DQ9BY66 1539 aa14.35□□□□□ -0.11
BRCC3-207ENST00000411985 UHRF1BP1Q6BDS2 1440 aa14.34□□□□□ -0.11
BRCC3-207ENST00000411985 CFAP65Q6ZU64 1925 aaKnown RBP14.34□□□□□ -0.11
BRCC3-207ENST00000411985 DUOX2Q9NRD8 1548 aa14.32□□□□□ -0.12
BRCC3-207ENST00000411985 GGT6Q6P531 493 aa14.32□□□□□ -0.12
BRCC3-207ENST00000411985 MROH1Q8NDA8 1641 aa14.32□□□□□ -0.12
BRCC3-207ENST00000411985 DAPK1P53355 1430 aa14.32□□□□□ -0.12
BRCC3-207ENST00000411985 NPATQ14207 1427 aa14.32□□□□□ -0.12
BRCC3-207ENST00000411985 DEPDC5O75140 1603 aa14.31□□□□□ -0.12
BRCC3-207ENST00000411985 ZMYM3Q14202 1370 aa14.31□□□□□ -0.12
BRCC3-207ENST00000411985 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
BRCC3-207ENST00000411985 HSPA2P54652 639 aa14.3□□□□□ -0.12
BRCC3-207ENST00000411985 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
BRCC3-207ENST00000411985 ABCC5O15440 1437 aa14.3□□□□□ -0.12
BRCC3-207ENST00000411985 KIF3BO15066 747 aa14.29□□□□□ -0.12
BRCC3-207ENST00000411985 POLR1AO95602 1720 aaPredicted RBP14.28□□□□□ -0.12
BRCC3-207ENST00000411985 CEP170BQ9Y4F5 1589 aaPredicted RBP14.28□□□□□ -0.12
BRCC3-207ENST00000411985 PRDM15P57071 1507 aaPredicted RBP14.27□□□□□ -0.12
BRCC3-207ENST00000411985 PTPRKQ15262 1439 aa14.27□□□□□ -0.12
BRCC3-207ENST00000411985 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
BRCC3-207ENST00000411985 ABCC3O15438 1527 aa14.25□□□□□ -0.13
BRCC3-207ENST00000411985 PZPP20742 1482 aa14.25□□□□□ -0.13
BRCC3-207ENST00000411985 KIF15Q9NS87 1388 aa14.24□□□□□ -0.13
BRCC3-207ENST00000411985 ADGRL2O95490 1459 aa14.24□□□□□ -0.13
BRCC3-207ENST00000411985 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
BRCC3-207ENST00000411985 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
BRCC3-207ENST00000411985 SPATA31D1Q6ZQQ2 1576 aa14.21□□□□□ -0.14
BRCC3-207ENST00000411985 FAM50AQ14320 339 aaKnown RBP14.2□□□□□ -0.14
BRCC3-207ENST00000411985 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
BRCC3-207ENST00000411985 RRP7BPQ9NSQ0 103 aa14.19□□□□□ -0.14
BRCC3-207ENST00000411985 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
BRCC3-207ENST00000411985 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
BRCC3-207ENST00000411985 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
BRCC3-207ENST00000411985 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
BRCC3-207ENST00000411985 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
BRCC3-207ENST00000411985 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
BRCC3-207ENST00000411985 UNC13BO14795 1591 aa14.17□□□□□ -0.14
BRCC3-207ENST00000411985 TNRQ92752 1358 aa14.16□□□□□ -0.14
BRCC3-207ENST00000411985 PTPRTO14522 1441 aa14.15□□□□□ -0.14
BRCC3-207ENST00000411985 ERVK-7P63135 1459 aa14.15□□□□□ -0.14
BRCC3-207ENST00000411985 NLRP1Q9C000 1473 aa14.15□□□□□ -0.14
BRCC3-207ENST00000411985 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
BRCC3-207ENST00000411985 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
BRCC3-207ENST00000411985 TET3O43151 1660 aa14.14□□□□□ -0.15
BRCC3-207ENST00000411985 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
BRCC3-207ENST00000411985 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
BRCC3-207ENST00000411985 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
BRCC3-207ENST00000411985 PPARGC1BQ86YN6 1023 aaKnown RBP14.14□□□□□ -0.15
BRCC3-207ENST00000411985 EFCAB6Q5THR3 1501 aa14.14□□□□□ -0.15
BRCC3-207ENST00000411985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.15
BRCC3-207ENST00000411985 ARHGAP31Q2M1Z3 1444 aa14.13□□□□□ -0.15
BRCC3-207ENST00000411985 MYO5BQ9ULV0 1848 aa14.13□□□□□ -0.15
BRCC3-207ENST00000411985 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
BRCC3-207ENST00000411985 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
BRCC3-207ENST00000411985 KANK1Q14678 1352 aa14.12□□□□□ -0.15
BRCC3-207ENST00000411985 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
BRCC3-207ENST00000411985 IQGAP3Q86VI3 1631 aa14.11□□□□□ -0.15
BRCC3-207ENST00000411985 IQGAP1P46940 1657 aa14.1□□□□□ -0.15
BRCC3-207ENST00000411985 ILDR1Q86SU0 546 aaPredicted RBP14.1□□□□□ -0.15
BRCC3-207ENST00000411985 E9PCH4 1651 aa14.1□□□□□ -0.15
BRCC3-207ENST00000411985 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
BRCC3-207ENST00000411985 RRBP1Q9P2E9 1410 aaKnown RBP14.09□□□□□ -0.15
BRCC3-207ENST00000411985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
BRCC3-207ENST00000411985 SYNMO15061 1565 aa14.09□□□□□ -0.15
BRCC3-207ENST00000411985 LTBP4Q8N2S1 1624 aa14.08□□□□□ -0.15
BRCC3-207ENST00000411985 PKD2Q13563 968 aa14.07□□□□□ -0.16
BRCC3-207ENST00000411985 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
BRCC3-207ENST00000411985 RPRD2Q5VT52 1461 aaKnown RBP14.05□□□□□ -0.16
BRCC3-207ENST00000411985 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
BRCC3-207ENST00000411985 ITGAEP38570 1179 aa14.04□□□□□ -0.16
BRCC3-207ENST00000411985 CERKQ8TCT0 537 aa14.04□□□□□ -0.16
BRCC3-207ENST00000411985 FBXO41Q8TF61 875 aa14.04□□□□□ -0.16
BRCC3-207ENST00000411985 THEMISQ8N1K5 641 aaPredicted RBP14.03□□□□□ -0.16
BRCC3-207ENST00000411985 MED14O60244 1454 aa14.03□□□□□ -0.16
BRCC3-207ENST00000411985 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
BRCC3-207ENST00000411985 ADGRB3O60242 1522 aa14.02□□□□□ -0.16
BRCC3-207ENST00000411985 SLIT1O75093 1534 aa14.02□□□□□ -0.16
BRCC3-207ENST00000411985 IQSEC2Q5JU85 1478 aa14.01□□□□□ -0.17
BRCC3-207ENST00000411985 NOS1P29475 1434 aa14.01□□□□□ -0.17
BRCC3-207ENST00000411985 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
BRCC3-207ENST00000411985 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
BRCC3-207ENST00000411985 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
BRCC3-207ENST00000411985 ANKLE2Q86XL3 938 aa13.99□□□□□ -0.17
BRCC3-207ENST00000411985 TMEM131LA2VDJ0 1609 aa13.99□□□□□ -0.17
BRCC3-207ENST00000411985 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
BRCC3-207ENST00000411985 SCAF11Q99590 1463 aaKnown RBP13.98□□□□□ -0.17
BRCC3-207ENST00000411985 KIF1BO60333 1816 aa13.97□□□□□ -0.17
BRCC3-207ENST00000411985 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-207ENST00000411985 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
BRCC3-207ENST00000411985 CPS1P31327 1500 aa13.96□□□□□ -0.17
BRCC3-207ENST00000411985 NAIPQ13075 1403 aa13.95□□□□□ -0.18
BRCC3-207ENST00000411985 NUP155O75694 1391 aa13.94□□□□□ -0.18
BRCC3-207ENST00000411985 HFM1A2PYH4 1435 aa13.93□□□□□ -0.18
BRCC3-207ENST00000411985 IDI1Q13907 227 aa13.93□□□□□ -0.18
BRCC3-207ENST00000411985 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
BRCC3-207ENST00000411985 TMEM2Q9UHN6 1383 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms