RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
BRCC3-207ENST00000411985 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
BRCC3-207ENST00000411985 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
BRCC3-207ENST00000411985 ABCC9O60706 1549 aa19.94■□□□□ 0.78
BRCC3-207ENST00000411985 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
BRCC3-207ENST00000411985 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
BRCC3-207ENST00000411985 NACADO15069 1562 aa19.12■□□□□ 0.65
BRCC3-207ENST00000411985 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
BRCC3-207ENST00000411985 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
BRCC3-207ENST00000411985 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
BRCC3-207ENST00000411985 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
BRCC3-207ENST00000411985 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
BRCC3-207ENST00000411985 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
BRCC3-207ENST00000411985 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
BRCC3-207ENST00000411985 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
BRCC3-207ENST00000411985 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
BRCC3-207ENST00000411985 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
BRCC3-207ENST00000411985 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
BRCC3-207ENST00000411985 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
BRCC3-207ENST00000411985 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
BRCC3-207ENST00000411985 SMARCA4P51532 1647 aa17.73■□□□□ 0.43
BRCC3-207ENST00000411985 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
BRCC3-207ENST00000411985 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
BRCC3-207ENST00000411985 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
BRCC3-207ENST00000411985 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
BRCC3-207ENST00000411985 HMGXB3Q12766 1538 aa17.56■□□□□ 0.4
BRCC3-207ENST00000411985 PEG3Q9GZU2 1588 aa17.54■□□□□ 0.4
BRCC3-207ENST00000411985 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
BRCC3-207ENST00000411985 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
BRCC3-207ENST00000411985 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
BRCC3-207ENST00000411985 WIZO95785 1651 aa17.39■□□□□ 0.37
BRCC3-207ENST00000411985 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
BRCC3-207ENST00000411985 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
BRCC3-207ENST00000411985 NESP48681 1621 aa17.22■□□□□ 0.35
BRCC3-207ENST00000411985 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
BRCC3-207ENST00000411985 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
BRCC3-207ENST00000411985 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
BRCC3-207ENST00000411985 TOP2AP11388 1531 aaKnown RBP17.15■□□□□ 0.34
BRCC3-207ENST00000411985 CUX2O14529 1486 aa17.11■□□□□ 0.33
BRCC3-207ENST00000411985 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
BRCC3-207ENST00000411985 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
BRCC3-207ENST00000411985 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
BRCC3-207ENST00000411985 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
BRCC3-207ENST00000411985 CFTRP13569 1480 aa16.93■□□□□ 0.3
BRCC3-207ENST00000411985 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
BRCC3-207ENST00000411985 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
BRCC3-207ENST00000411985 WDR62O43379 1518 aa16.89■□□□□ 0.29
BRCC3-207ENST00000411985 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
BRCC3-207ENST00000411985 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
BRCC3-207ENST00000411985 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
BRCC3-207ENST00000411985 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
BRCC3-207ENST00000411985 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
BRCC3-207ENST00000411985 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
BRCC3-207ENST00000411985 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
BRCC3-207ENST00000411985 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
BRCC3-207ENST00000411985 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
BRCC3-207ENST00000411985 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
BRCC3-207ENST00000411985 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
BRCC3-207ENST00000411985 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
BRCC3-207ENST00000411985 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
BRCC3-207ENST00000411985 CUX1P39880 1505 aa16.43■□□□□ 0.22
BRCC3-207ENST00000411985 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
BRCC3-207ENST00000411985 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
BRCC3-207ENST00000411985 CHD1O14646 1710 aa16.39■□□□□ 0.21
BRCC3-207ENST00000411985 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
BRCC3-207ENST00000411985 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
BRCC3-207ENST00000411985 PBRM1Q86U86 1689 aa16.35■□□□□ 0.21
BRCC3-207ENST00000411985 SOGA1O94964 1423 aa16.33■□□□□ 0.2
BRCC3-207ENST00000411985 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.23e-7■■■□□ 19
BRCC3-207ENST00000411985 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
BRCC3-207ENST00000411985 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
BRCC3-207ENST00000411985 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
BRCC3-207ENST00000411985 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
BRCC3-207ENST00000411985 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
BRCC3-207ENST00000411985 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
BRCC3-207ENST00000411985 FOXD1Q16676 465 aa16.22■□□□□ 0.19
BRCC3-207ENST00000411985 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
BRCC3-207ENST00000411985 SNAPC4Q5SXM2 1469 aa16.21■□□□□ 0.19
BRCC3-207ENST00000411985 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
BRCC3-207ENST00000411985 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
BRCC3-207ENST00000411985 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
BRCC3-207ENST00000411985 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
BRCC3-207ENST00000411985 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
BRCC3-207ENST00000411985 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
BRCC3-207ENST00000411985 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
BRCC3-207ENST00000411985 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
BRCC3-207ENST00000411985 FBLN2P98095 1184 aa16.11■□□□□ 0.17
BRCC3-207ENST00000411985 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
BRCC3-207ENST00000411985 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
BRCC3-207ENST00000411985 ERICH3Q5RHP9 1530 aa16.06■□□□□ 0.16
BRCC3-207ENST00000411985 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-207ENST00000411985 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
BRCC3-207ENST00000411985 GRIN2AQ12879 1464 aa16.01■□□□□ 0.15
BRCC3-207ENST00000411985 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
BRCC3-207ENST00000411985 CUL7Q14999 1698 aa15.97■□□□□ 0.15
BRCC3-207ENST00000411985 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
BRCC3-207ENST00000411985 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
BRCC3-207ENST00000411985 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
BRCC3-207ENST00000411985 NUP160Q12769 1436 aa15.92■□□□□ 0.14
BRCC3-207ENST00000411985 KIF27Q86VH2 1401 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms