RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ANP32AP39687 249 aaKnown RBP20.93■□□□□ 0.94
LIMS2-205ENST00000409455 AFAP1Q8N556 730 aa20.93■□□□□ 0.94
LIMS2-205ENST00000409455 ABCC1P33527 1531 aa20.92■□□□□ 0.94
LIMS2-205ENST00000409455 FANCAO15360 1455 aa20.92■□□□□ 0.94
LIMS2-205ENST00000409455 CCDC7Q96M83 1385 aa20.92■□□□□ 0.94
LIMS2-205ENST00000409455 ANKRD30BQ9BXX2 1392 aa20.92■□□□□ 0.94
LIMS2-205ENST00000409455 NUP155O75694 1391 aa20.91■□□□□ 0.94
LIMS2-205ENST00000409455 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
LIMS2-205ENST00000409455 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.94
LIMS2-205ENST00000409455 PKD2Q13563 968 aa20.88■□□□□ 0.93
LIMS2-205ENST00000409455 IPO9Q96P70 1041 aaKnown RBP20.88■□□□□ 0.93
LIMS2-205ENST00000409455 PRKCSHP14314 528 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-205ENST00000409455 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
LIMS2-205ENST00000409455 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
LIMS2-205ENST00000409455 SPAG9O60271 1321 aaKnown RBP20.86■□□□□ 0.93
LIMS2-205ENST00000409455 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
LIMS2-205ENST00000409455 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
LIMS2-205ENST00000409455 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
LIMS2-205ENST00000409455 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
LIMS2-205ENST00000409455 C11orf95C9JLR9 678 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-205ENST00000409455 SCAPERQ9BY12 1400 aa20.84■□□□□ 0.93
LIMS2-205ENST00000409455 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
LIMS2-205ENST00000409455 ADGRL1O94910 1474 aa20.82■□□□□ 0.92
LIMS2-205ENST00000409455 PLXNC1O60486 1568 aa20.81■□□□□ 0.92
LIMS2-205ENST00000409455 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
LIMS2-205ENST00000409455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
LIMS2-205ENST00000409455 RPRD2Q5VT52 1461 aaKnown RBP20.79■□□□□ 0.92
LIMS2-205ENST00000409455 RTEL1-TNFRSF6BF6WH68 1400 aa20.79■□□□□ 0.92
LIMS2-205ENST00000409455 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
LIMS2-205ENST00000409455 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
LIMS2-205ENST00000409455 DUOX2Q9NRD8 1548 aa20.79■□□□□ 0.92
LIMS2-205ENST00000409455 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.92
LIMS2-205ENST00000409455 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
LIMS2-205ENST00000409455 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
LIMS2-205ENST00000409455 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
LIMS2-205ENST00000409455 ZFYVE16Q7Z3T8 1539 aa20.75■□□□□ 0.91
LIMS2-205ENST00000409455 FAM135AQ9P2D6 1515 aa20.74■□□□□ 0.91
LIMS2-205ENST00000409455 ATP7AQ04656 1500 aa20.7■□□□□ 0.9
LIMS2-205ENST00000409455 SPATA31E1Q6ZUB1 1445 aa20.7■□□□□ 0.9
LIMS2-205ENST00000409455 UNC13BO14795 1591 aa20.7■□□□□ 0.9
LIMS2-205ENST00000409455 TEX14Q8IWB6 1497 aa20.68■□□□□ 0.9
LIMS2-205ENST00000409455 NBPF8Q3BBV2 869 aa20.68■□□□□ 0.9
LIMS2-205ENST00000409455 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
LIMS2-205ENST00000409455 INO80Q9ULG1 1556 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-205ENST00000409455 ANO8Q9HCE9 1232 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-205ENST00000409455 FAM69CQ0P6D2 419 aa20.67■□□□□ 0.9
LIMS2-205ENST00000409455 MAGI2Q86UL8 1455 aa20.65■□□□□ 0.9
LIMS2-205ENST00000409455 DHX29Q7Z478 1369 aaKnown RBP20.64■□□□□ 0.9
LIMS2-205ENST00000409455 KIF3BO15066 747 aa20.64■□□□□ 0.9
LIMS2-205ENST00000409455 RAPGEF3O95398 923 aa20.64■□□□□ 0.9
LIMS2-205ENST00000409455 CFAP74Q9C0B2 1584 aa20.64■□□□□ 0.89
LIMS2-205ENST00000409455 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
LIMS2-205ENST00000409455 NEO1Q92859 1461 aa20.63■□□□□ 0.89
LIMS2-205ENST00000409455 IQGAP3Q86VI3 1631 aa20.63■□□□□ 0.89
LIMS2-205ENST00000409455 USP35Q9P2H5 1018 aa20.61■□□□□ 0.89
LIMS2-205ENST00000409455 KIDINS220Q9ULH0 1771 aa20.61■□□□□ 0.89
LIMS2-205ENST00000409455 MAP3K4Q9Y6R4 1608 aa20.6■□□□□ 0.89
LIMS2-205ENST00000409455 GLI2P10070 1586 aa20.6■□□□□ 0.89
LIMS2-205ENST00000409455 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
LIMS2-205ENST00000409455 IL27Q8NEV9 243 aa20.59■□□□□ 0.89
LIMS2-205ENST00000409455 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
LIMS2-205ENST00000409455 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
LIMS2-205ENST00000409455 SALL2Q9Y467 1007 aaPredicted RBP20.58■□□□□ 0.89
LIMS2-205ENST00000409455 KDM5CP41229 1560 aa20.58■□□□□ 0.89
LIMS2-205ENST00000409455 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.88
LIMS2-205ENST00000409455 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
LIMS2-205ENST00000409455 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
LIMS2-205ENST00000409455 NEFMP07197 916 aa20.56■□□□□ 0.88
LIMS2-205ENST00000409455 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
LIMS2-205ENST00000409455 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
LIMS2-205ENST00000409455 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
LIMS2-205ENST00000409455 A2MP01023 1474 aa20.55■□□□□ 0.88
LIMS2-205ENST00000409455 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
LIMS2-205ENST00000409455 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
LIMS2-205ENST00000409455 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
LIMS2-205ENST00000409455 KANK1Q14678 1352 aa20.53■□□□□ 0.88
LIMS2-205ENST00000409455 DCAF11Q8TEB1 546 aa20.53■□□□□ 0.88
LIMS2-205ENST00000409455 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-205ENST00000409455 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
LIMS2-205ENST00000409455 RGL3Q3MIN7 710 aa20.52■□□□□ 0.88
LIMS2-205ENST00000409455 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.88
LIMS2-205ENST00000409455 USP47Q96K76 1375 aa20.52■□□□□ 0.88
LIMS2-205ENST00000409455 RRP1P56182 461 aaKnown RBP20.52■□□□□ 0.87
LIMS2-205ENST00000409455 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
LIMS2-205ENST00000409455 PPM1GO15355 546 aaPredicted RBP20.51■□□□□ 0.87
LIMS2-205ENST00000409455 ATP10AO60312 1499 aa20.5■□□□□ 0.87
LIMS2-205ENST00000409455 PDE4AP27815 886 aa20.5■□□□□ 0.87
LIMS2-205ENST00000409455 RTN4Q9NQC3 1192 aaKnown RBP20.5■□□□□ 0.87
LIMS2-205ENST00000409455 EIF2AK4Q9P2K8 1649 aaKnown RBP20.5■□□□□ 0.87
LIMS2-205ENST00000409455 SENP3-EIF4A1A0A087X0R7 540 aa20.49■□□□□ 0.87
LIMS2-205ENST00000409455 MS4A1P11836 297 aa20.49■□□□□ 0.87
LIMS2-205ENST00000409455 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
LIMS2-205ENST00000409455 BCORL1Q5H9F3 1711 aa20.48■□□□□ 0.87
LIMS2-205ENST00000409455 GGT6Q6P531 493 aa20.48■□□□□ 0.87
LIMS2-205ENST00000409455 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
LIMS2-205ENST00000409455 BACH2Q9BYV9 841 aa20.47■□□□□ 0.87
LIMS2-205ENST00000409455 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
LIMS2-205ENST00000409455 FRMPD1Q5SYB0 1578 aa20.47■□□□□ 0.87
LIMS2-205ENST00000409455 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
LIMS2-205ENST00000409455 E9PCH4 1651 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms