RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
LRRTM1-202ENST00000409148 SPAG9O60271 1321 aaKnown RBP24.02■■□□□ 1.44
LRRTM1-202ENST00000409148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.43
LRRTM1-202ENST00000409148 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
LRRTM1-202ENST00000409148 KDM5CP41229 1560 aa23.98■■□□□ 1.43
LRRTM1-202ENST00000409148 USP47Q96K76 1375 aa23.97■■□□□ 1.43
LRRTM1-202ENST00000409148 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
LRRTM1-202ENST00000409148 INO80Q9ULG1 1556 aaPredicted RBP23.96■■□□□ 1.43
LRRTM1-202ENST00000409148 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
LRRTM1-202ENST00000409148 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 ATP7AQ04656 1500 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 AFAP1Q8N556 730 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 ATP10AO60312 1499 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
LRRTM1-202ENST00000409148 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
LRRTM1-202ENST00000409148 DCAF11Q8TEB1 546 aa23.92■■□□□ 1.42
LRRTM1-202ENST00000409148 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
LRRTM1-202ENST00000409148 SCAPERQ9BY12 1400 aa23.91■■□□□ 1.42
LRRTM1-202ENST00000409148 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.42
LRRTM1-202ENST00000409148 CARD11Q9BXL7 1154 aa23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 CFAP74Q9C0B2 1584 aa23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 BCORL1Q5H9F3 1711 aa23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 EIF2AK4Q9P2K8 1649 aaKnown RBP23.86■■□□□ 1.41
LRRTM1-202ENST00000409148 TRPM1Q7Z4N2 1603 aa23.85■■□□□ 1.41
LRRTM1-202ENST00000409148 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
LRRTM1-202ENST00000409148 E9PCH4 1651 aa23.84■■□□□ 1.41
LRRTM1-202ENST00000409148 A2MP01023 1474 aa23.84■■□□□ 1.41
LRRTM1-202ENST00000409148 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
LRRTM1-202ENST00000409148 TET3O43151 1660 aa23.82■■□□□ 1.4
LRRTM1-202ENST00000409148 KANK1Q14678 1352 aa23.81■■□□□ 1.4
LRRTM1-202ENST00000409148 ZNF518AQ6AHZ1 1483 aa23.81■■□□□ 1.4
LRRTM1-202ENST00000409148 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
LRRTM1-202ENST00000409148 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 DHX29Q7Z478 1369 aaKnown RBP23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 VWDEQ8N2E2 1590 aa23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
LRRTM1-202ENST00000409148 TRPM2O94759 1503 aa23.79■■□□□ 1.4
LRRTM1-202ENST00000409148 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 SPHKAPQ2M3C7 1700 aa23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 LAMC1P11047 1609 aa23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 KIDINS220Q9ULH0 1771 aa23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 PRDM15P57071 1507 aaPredicted RBP23.77■■□□□ 1.4
LRRTM1-202ENST00000409148 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
LRRTM1-202ENST00000409148 PTPRTO14522 1441 aa23.74■■□□□ 1.39
LRRTM1-202ENST00000409148 CEP152O94986 1710 aa23.74■■□□□ 1.39
LRRTM1-202ENST00000409148 KIF3BO15066 747 aa23.73■■□□□ 1.39
LRRTM1-202ENST00000409148 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
LRRTM1-202ENST00000409148 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
LRRTM1-202ENST00000409148 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
LRRTM1-202ENST00000409148 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
LRRTM1-202ENST00000409148 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
LRRTM1-202ENST00000409148 MLH3Q9UHC1 1453 aa23.68■■□□□ 1.38
LRRTM1-202ENST00000409148 HECW2Q9P2P5 1572 aa23.67■■□□□ 1.38
LRRTM1-202ENST00000409148 NEO1Q92859 1461 aa23.67■■□□□ 1.38
LRRTM1-202ENST00000409148 RNF17Q9BXT8 1623 aaKnown RBP23.67■■□□□ 1.38
LRRTM1-202ENST00000409148 STAC3Q96MF2 364 aa23.66■■□□□ 1.38
LRRTM1-202ENST00000409148 EFCAB6Q5THR3 1501 aa23.65■■□□□ 1.38
LRRTM1-202ENST00000409148 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
LRRTM1-202ENST00000409148 NEURL4Q96JN8 1562 aa23.64■■□□□ 1.38
LRRTM1-202ENST00000409148 MADDQ8WXG6 1647 aa23.64■■□□□ 1.37
LRRTM1-202ENST00000409148 LMTK2Q8IWU2 1503 aa23.64■■□□□ 1.37
LRRTM1-202ENST00000409148 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
LRRTM1-202ENST00000409148 SUPT16HQ9Y5B9 1047 aaKnown RBP23.63■■□□□ 1.37
LRRTM1-202ENST00000409148 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
LRRTM1-202ENST00000409148 CCDC184Q52MB2 194 aa23.6■■□□□ 1.37
LRRTM1-202ENST00000409148 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
LRRTM1-202ENST00000409148 FRMPD1Q5SYB0 1578 aa23.58■■□□□ 1.37
LRRTM1-202ENST00000409148 COL17A1Q9UMD9 1497 aaPredicted RBP23.57■■□□□ 1.36
LRRTM1-202ENST00000409148 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
LRRTM1-202ENST00000409148 MAP3K4Q9Y6R4 1608 aa23.57■■□□□ 1.36
LRRTM1-202ENST00000409148 KIF1BO60333 1816 aa23.56■■□□□ 1.36
LRRTM1-202ENST00000409148 KTN1Q86UP2 1357 aaKnown RBP23.54■■□□□ 1.36
LRRTM1-202ENST00000409148 GLI2P10070 1586 aa23.54■■□□□ 1.36
LRRTM1-202ENST00000409148 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
LRRTM1-202ENST00000409148 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
LRRTM1-202ENST00000409148 KIAA1210Q9ULL0 1709 aa23.52■■□□□ 1.36
LRRTM1-202ENST00000409148 TESK2Q96S53 571 aa23.51■■□□□ 1.35
LRRTM1-202ENST00000409148 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
LRRTM1-202ENST00000409148 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
LRRTM1-202ENST00000409148 MYOM2P54296 1465 aa23.49■■□□□ 1.35
LRRTM1-202ENST00000409148 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
LRRTM1-202ENST00000409148 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
LRRTM1-202ENST00000409148 NEFLP07196 543 aa23.48■■□□□ 1.35
LRRTM1-202ENST00000409148 TMF1P82094 1093 aa23.48■■□□□ 1.35
LRRTM1-202ENST00000409148 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 SCAF11Q99590 1463 aaKnown RBP23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 RALBP1Q15311 655 aa23.46■■□□□ 1.35
LRRTM1-202ENST00000409148 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.35
LRRTM1-202ENST00000409148 ABCC3O15438 1527 aa23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 GGT6Q6P531 493 aa23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 MROH2AA6NES4 1674 aa23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 KIF13AQ9H1H9 1805 aa23.44■■□□□ 1.34
LRRTM1-202ENST00000409148 NPATQ14207 1427 aa23.44■■□□□ 1.34
LRRTM1-202ENST00000409148 ZBED9Q6R2W3 1325 aa23.44■■□□□ 1.34
LRRTM1-202ENST00000409148 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms