RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
GDPD3-202ENST00000406256 ROCK1Q13464 1354 aa24.33■■□□□ 1.49
GDPD3-202ENST00000406256 KIF3BO15066 747 aa24.33■■□□□ 1.49
GDPD3-202ENST00000406256 PRDM15P57071 1507 aaPredicted RBP24.31■■□□□ 1.48
GDPD3-202ENST00000406256 FAM135AQ9P2D6 1515 aa24.31■■□□□ 1.48
GDPD3-202ENST00000406256 GGT6Q6P531 493 aa24.3■■□□□ 1.48
GDPD3-202ENST00000406256 CNTLNQ9NXG0 1405 aa24.3■■□□□ 1.48
GDPD3-202ENST00000406256 CEP152O94986 1710 aa24.29■■□□□ 1.48
GDPD3-202ENST00000406256 KDM5DQ9BY66 1539 aa24.29■■□□□ 1.48
GDPD3-202ENST00000406256 ZC3H13Q5T200 1668 aaKnown RBP24.27■■□□□ 1.48
GDPD3-202ENST00000406256 ITGAEP38570 1179 aa24.27■■□□□ 1.48
GDPD3-202ENST00000406256 VWDEQ8N2E2 1590 aa24.26■■□□□ 1.47
GDPD3-202ENST00000406256 ANKRD50Q9ULJ7 1429 aa24.26■■□□□ 1.47
GDPD3-202ENST00000406256 ABCC3O15438 1527 aa24.26■■□□□ 1.47
GDPD3-202ENST00000406256 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
GDPD3-202ENST00000406256 CEBPAP49715 358 aaPredicted RBP24.25■■□□□ 1.47
GDPD3-202ENST00000406256 GCC2Q8IWJ2 1684 aa24.25■■□□□ 1.47
GDPD3-202ENST00000406256 SETD1BQ9UPS6 1966 aaKnown RBP24.23■■□□□ 1.47
GDPD3-202ENST00000406256 UNC13BO14795 1591 aa24.22■■□□□ 1.47
GDPD3-202ENST00000406256 ZMYM3Q14202 1370 aa24.22■■□□□ 1.47
GDPD3-202ENST00000406256 CAMSAP1Q5T5Y3 1602 aa24.21■■□□□ 1.47
GDPD3-202ENST00000406256 PREX1Q8TCU6 1659 aa24.19■■□□□ 1.46
GDPD3-202ENST00000406256 NAIPQ13075 1403 aa24.18■■□□□ 1.46
GDPD3-202ENST00000406256 LMTK3Q96Q04 1460 aa24.17■■□□□ 1.46
GDPD3-202ENST00000406256 LMTK2Q8IWU2 1503 aa24.16■■□□□ 1.46
GDPD3-202ENST00000406256 ESF1Q9H501 851 aaKnown RBP24.16■■□□□ 1.46
GDPD3-202ENST00000406256 PZPP20742 1482 aa24.16■■□□□ 1.46
GDPD3-202ENST00000406256 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
GDPD3-202ENST00000406256 HFM1A2PYH4 1435 aa24.15■■□□□ 1.46
GDPD3-202ENST00000406256 WASHC2CQ9Y4E1 1318 aa24.15■■□□□ 1.46
GDPD3-202ENST00000406256 NPATQ14207 1427 aa24.14■■□□□ 1.46
GDPD3-202ENST00000406256 CFAP65Q6ZU64 1925 aaKnown RBP24.13■■□□□ 1.45
GDPD3-202ENST00000406256 IQGAP3Q86VI3 1631 aa24.11■■□□□ 1.45
GDPD3-202ENST00000406256 MYO3AQ8NEV4 1616 aa24.1■■□□□ 1.45
GDPD3-202ENST00000406256 EFCAB6Q5THR3 1501 aa24.1■■□□□ 1.45
GDPD3-202ENST00000406256 ARHGAP31Q2M1Z3 1444 aa24.09■■□□□ 1.45
GDPD3-202ENST00000406256 SPATA31D1Q6ZQQ2 1576 aa24.09■■□□□ 1.45
GDPD3-202ENST00000406256 TET3O43151 1660 aa24.08■■□□□ 1.45
GDPD3-202ENST00000406256 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.45
GDPD3-202ENST00000406256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.45
GDPD3-202ENST00000406256 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
GDPD3-202ENST00000406256 ERVK-7P63135 1459 aa24.05■■□□□ 1.44
GDPD3-202ENST00000406256 KANK1Q14678 1352 aa24.05■■□□□ 1.44
GDPD3-202ENST00000406256 UHRF1BP1Q6BDS2 1440 aa24.03■■□□□ 1.44
GDPD3-202ENST00000406256 E9PCH4 1651 aa24.03■■□□□ 1.44
GDPD3-202ENST00000406256 CEP170BQ9Y4F5 1589 aaPredicted RBP24.01■■□□□ 1.43
GDPD3-202ENST00000406256 TNRQ92752 1358 aa23.99■■□□□ 1.43
GDPD3-202ENST00000406256 SYNMO15061 1565 aa23.98■■□□□ 1.43
GDPD3-202ENST00000406256 NUP155O75694 1391 aa23.97■■□□□ 1.43
GDPD3-202ENST00000406256 NOS1P29475 1434 aa23.96■■□□□ 1.43
GDPD3-202ENST00000406256 RPRD2Q5VT52 1461 aaKnown RBP23.96■■□□□ 1.43
GDPD3-202ENST00000406256 HSPA2P54652 639 aa23.95■■□□□ 1.42
GDPD3-202ENST00000406256 A2ML1A8K2U0 1454 aa23.95■■□□□ 1.42
GDPD3-202ENST00000406256 STRCQ7RTU9 1775 aa23.95■■□□□ 1.42
GDPD3-202ENST00000406256 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
GDPD3-202ENST00000406256 SETD5Q9C0A6 1442 aa23.91■■□□□ 1.42
GDPD3-202ENST00000406256 UBR1Q8IWV7 1749 aa23.91■■□□□ 1.42
GDPD3-202ENST00000406256 PIK3C2BO00750 1634 aa23.89■■□□□ 1.42
GDPD3-202ENST00000406256 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
GDPD3-202ENST00000406256 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
GDPD3-202ENST00000406256 UGGT1Q9NYU2 1555 aa23.86■■□□□ 1.41
GDPD3-202ENST00000406256 KDM5AP29375 1690 aaKnown RBP23.85■■□□□ 1.41
GDPD3-202ENST00000406256 MYO5BQ9ULV0 1848 aa23.83■■□□□ 1.41
GDPD3-202ENST00000406256 PLA2R1Q13018 1463 aa23.83■■□□□ 1.41
GDPD3-202ENST00000406256 PTPRTO14522 1441 aa23.82■■□□□ 1.4
GDPD3-202ENST00000406256 POLR1AO95602 1720 aaPredicted RBP23.8■■□□□ 1.4
GDPD3-202ENST00000406256 ADGRB3O60242 1522 aa23.79■■□□□ 1.4
GDPD3-202ENST00000406256 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
GDPD3-202ENST00000406256 NEURL4Q96JN8 1562 aa23.78■■□□□ 1.4
GDPD3-202ENST00000406256 IDI1Q13907 227 aa23.78■■□□□ 1.4
GDPD3-202ENST00000406256 TRPM2O94759 1503 aa23.77■■□□□ 1.4
GDPD3-202ENST00000406256 TMEM131LA2VDJ0 1609 aa23.77■■□□□ 1.4
GDPD3-202ENST00000406256 ARHGAP23Q9P227 1491 aa23.76■■□□□ 1.39
GDPD3-202ENST00000406256 CLTCL1P53675 1640 aa23.75■■□□□ 1.39
GDPD3-202ENST00000406256 SLIT1O75093 1534 aa23.75■■□□□ 1.39
GDPD3-202ENST00000406256 PKD2Q13563 968 aa23.74■■□□□ 1.39
GDPD3-202ENST00000406256 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
GDPD3-202ENST00000406256 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
GDPD3-202ENST00000406256 HRCP23327 699 aa23.71■■□□□ 1.39
GDPD3-202ENST00000406256 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.38
GDPD3-202ENST00000406256 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
GDPD3-202ENST00000406256 NCKAP5LQ9HCH0 1330 aa23.69■■□□□ 1.38
GDPD3-202ENST00000406256 FOXD1Q16676 465 aa23.67■■□□□ 1.38
GDPD3-202ENST00000406256 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
GDPD3-202ENST00000406256 MED14O60244 1454 aa23.67■■□□□ 1.38
GDPD3-202ENST00000406256 KIF1BO60333 1816 aa23.66■■□□□ 1.38
GDPD3-202ENST00000406256 TRIM26Q12899 539 aaPredicted RBP23.65■■□□□ 1.38
GDPD3-202ENST00000406256 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
GDPD3-202ENST00000406256 ZFYVE9O95405 1425 aa23.65■■□□□ 1.38
GDPD3-202ENST00000406256 IQGAP1P46940 1657 aa23.63■■□□□ 1.37
GDPD3-202ENST00000406256 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
GDPD3-202ENST00000406256 LTKP29376 864 aa23.62■■□□□ 1.37
GDPD3-202ENST00000406256 ANKLE2Q86XL3 938 aa23.59■■□□□ 1.37
GDPD3-202ENST00000406256 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
GDPD3-202ENST00000406256 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
GDPD3-202ENST00000406256 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
GDPD3-202ENST00000406256 DMRT2Q9Y5R5 561 aa23.56■■□□□ 1.36
GDPD3-202ENST00000406256 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
GDPD3-202ENST00000406256 LTBP4Q8N2S1 1624 aa23.54■■□□□ 1.36
GDPD3-202ENST00000406256 ANKRD30BQ9BXX2 1392 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms