RNA–Protein interactions for RNA: ENST00000405878.5

XRCC6-205, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene XRCC6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-205ENST00000405878 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
XRCC6-205ENST00000405878 DDX10Q13206 875 aaKnown RBP14.46□□□□□ -0.09
XRCC6-205ENST00000405878 A2MP01023 1474 aa14.46□□□□□ -0.09
XRCC6-205ENST00000405878 ITGAEP38570 1179 aa14.46□□□□□ -0.1
XRCC6-205ENST00000405878 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.1
XRCC6-205ENST00000405878 NCOA1Q15788 1441 aa14.45□□□□□ -0.1
XRCC6-205ENST00000405878 INO80Q9ULG1 1556 aaPredicted RBP14.45□□□□□ -0.1
XRCC6-205ENST00000405878 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
XRCC6-205ENST00000405878 EHBP1L1Q8N3D4 1523 aa14.44□□□□□ -0.1
XRCC6-205ENST00000405878 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
XRCC6-205ENST00000405878 GGT6Q6P531 493 aa14.43□□□□□ -0.1
XRCC6-205ENST00000405878 PLXNC1O60486 1568 aa14.43□□□□□ -0.1
XRCC6-205ENST00000405878 TIAM1Q13009 1591 aa14.42□□□□□ -0.1
XRCC6-205ENST00000405878 CAMSAP1Q5T5Y3 1602 aa14.42□□□□□ -0.1
XRCC6-205ENST00000405878 CLTCQ00610 1675 aaKnown RBP14.41□□□□□ -0.1
XRCC6-205ENST00000405878 ADGBQ8N7X0 1667 aa14.41□□□□□ -0.1
XRCC6-205ENST00000405878 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
XRCC6-205ENST00000405878 ERICH6Q7L0X2 663 aa14.41□□□□□ -0.1
XRCC6-205ENST00000405878 LTBP4Q8N2S1 1624 aa14.41□□□□□ -0.1
XRCC6-205ENST00000405878 NCOA2Q15596 1464 aa14.4□□□□□ -0.1
XRCC6-205ENST00000405878 IQSEC2Q5JU85 1478 aa14.4□□□□□ -0.1
XRCC6-205ENST00000405878 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
XRCC6-205ENST00000405878 PKD2Q13563 968 aa14.4□□□□□ -0.1
XRCC6-205ENST00000405878 TRIM52Q96A61 297 aa14.4□□□□□ -0.1
XRCC6-205ENST00000405878 PTPRKQ15262 1439 aa14.4□□□□□ -0.1
XRCC6-205ENST00000405878 MBD5Q9P267 1494 aa14.39□□□□□ -0.11
XRCC6-205ENST00000405878 RSPH4AQ5TD94 716 aa14.39□□□□□ -0.11
XRCC6-205ENST00000405878 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
XRCC6-205ENST00000405878 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
XRCC6-205ENST00000405878 ANP32CO43423 234 aa14.38□□□□□ -0.11
XRCC6-205ENST00000405878 PLA2R1Q13018 1463 aa14.37□□□□□ -0.11
XRCC6-205ENST00000405878 DHX29Q7Z478 1369 aaKnown RBP14.37□□□□□ -0.11
XRCC6-205ENST00000405878 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
XRCC6-205ENST00000405878 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
XRCC6-205ENST00000405878 TIMELESSQ9UNS1 1208 aa14.36□□□□□ -0.11
XRCC6-205ENST00000405878 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
XRCC6-205ENST00000405878 MAP3K1Q13233 1512 aa14.35□□□□□ -0.11
XRCC6-205ENST00000405878 DISP3Q9P2K9 1392 aa14.35□□□□□ -0.11
XRCC6-205ENST00000405878 KIF3BO15066 747 aa14.33□□□□□ -0.12
XRCC6-205ENST00000405878 TCOF1Q13428 1488 aaKnown RBP14.33□□□□□ -0.12
XRCC6-205ENST00000405878 CCDC141Q6ZP82 1450 aa14.33□□□□□ -0.12
XRCC6-205ENST00000405878 A2ML1A8K2U0 1454 aa14.32□□□□□ -0.12
XRCC6-205ENST00000405878 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
XRCC6-205ENST00000405878 SETD5Q9C0A6 1442 aa14.31□□□□□ -0.12
XRCC6-205ENST00000405878 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
XRCC6-205ENST00000405878 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
XRCC6-205ENST00000405878 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
XRCC6-205ENST00000405878 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
XRCC6-205ENST00000405878 CAMSAP2Q08AD1 1489 aa14.3□□□□□ -0.12
XRCC6-205ENST00000405878 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
XRCC6-205ENST00000405878 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
XRCC6-205ENST00000405878 DNMT1P26358 1616 aaKnown RBP14.29□□□□□ -0.12
XRCC6-205ENST00000405878 TNRQ92752 1358 aa14.28□□□□□ -0.12
XRCC6-205ENST00000405878 UBAP1LF5GYI3 381 aa14.28□□□□□ -0.12
XRCC6-205ENST00000405878 FBXO31Q5XUX0 539 aaPredicted RBP14.28□□□□□ -0.12
XRCC6-205ENST00000405878 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
XRCC6-205ENST00000405878 KDM5DQ9BY66 1539 aa14.28□□□□□ -0.12
XRCC6-205ENST00000405878 PZPP20742 1482 aa14.28□□□□□ -0.12
XRCC6-205ENST00000405878 ILDR2Q71H61 639 aa14.27□□□□□ -0.12
XRCC6-205ENST00000405878 ARHGEF5Q12774 1597 aa14.27□□□□□ -0.13
XRCC6-205ENST00000405878 MYOM3Q5VTT5 1437 aa14.27□□□□□ -0.13
XRCC6-205ENST00000405878 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.13
XRCC6-205ENST00000405878 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
XRCC6-205ENST00000405878 SPATA31D1Q6ZQQ2 1576 aa14.25□□□□□ -0.13
XRCC6-205ENST00000405878 SOCS7O14512 581 aa14.25□□□□□ -0.13
XRCC6-205ENST00000405878 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
XRCC6-205ENST00000405878 MIA2Q96PC5 1412 aa14.24□□□□□ -0.13
XRCC6-205ENST00000405878 NLRP1Q9C000 1473 aa14.23□□□□□ -0.13
XRCC6-205ENST00000405878 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
XRCC6-205ENST00000405878 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
XRCC6-205ENST00000405878 PPP4R2Q9NY27 417 aa14.21□□□□□ -0.13
XRCC6-205ENST00000405878 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.14
XRCC6-205ENST00000405878 CPS1P31327 1500 aa14.21□□□□□ -0.14
XRCC6-205ENST00000405878 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
XRCC6-205ENST00000405878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.2□□□□□ -0.14
XRCC6-205ENST00000405878 SHANK2Q9UPX8 1470 aa14.2□□□□□ -0.14
XRCC6-205ENST00000405878 NEURL4Q96JN8 1562 aa14.19□□□□□ -0.14
XRCC6-205ENST00000405878 UGGT1Q9NYU2 1555 aa14.19□□□□□ -0.14
XRCC6-205ENST00000405878 TOM1O60784 492 aa14.19□□□□□ -0.14
XRCC6-205ENST00000405878 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
XRCC6-205ENST00000405878 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
XRCC6-205ENST00000405878 MED14O60244 1454 aa14.18□□□□□ -0.14
XRCC6-205ENST00000405878 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
XRCC6-205ENST00000405878 ZC3H13Q5T200 1668 aaKnown RBP14.17□□□□□ -0.14
XRCC6-205ENST00000405878 EIF2AK4Q9P2K8 1649 aaKnown RBP14.17□□□□□ -0.14
XRCC6-205ENST00000405878 NPHP4O75161 1426 aaPredicted RBP14.17□□□□□ -0.14
XRCC6-205ENST00000405878 DEPDC5O75140 1603 aa14.16□□□□□ -0.14
XRCC6-205ENST00000405878 ABCC3O15438 1527 aa14.16□□□□□ -0.14
XRCC6-205ENST00000405878 ABCC5O15440 1437 aa14.15□□□□□ -0.14
XRCC6-205ENST00000405878 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
XRCC6-205ENST00000405878 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
XRCC6-205ENST00000405878 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
XRCC6-205ENST00000405878 NOP58Q9Y2X3 529 aaKnown RBP14.14□□□□□ -0.15
XRCC6-205ENST00000405878 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
XRCC6-205ENST00000405878 VWDEQ8N2E2 1590 aa14.13□□□□□ -0.15
XRCC6-205ENST00000405878 DUOX2Q9NRD8 1548 aa14.13□□□□□ -0.15
XRCC6-205ENST00000405878 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
XRCC6-205ENST00000405878 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
XRCC6-205ENST00000405878 HSPA1LP34931 641 aa14.12□□□□□ -0.15
XRCC6-205ENST00000405878 IQGAP1P46940 1657 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms