RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
CEACAM1-208ENST00000403461 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
CEACAM1-208ENST00000403461 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
CEACAM1-208ENST00000403461 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
CEACAM1-208ENST00000403461 SYNJ2O15056 1496 aa12.17□□□□□ -0.46
CEACAM1-208ENST00000403461 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
CEACAM1-208ENST00000403461 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
CEACAM1-208ENST00000403461 KIF3CO14782 793 aa12.15□□□□□ -0.46
CEACAM1-208ENST00000403461 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
CEACAM1-208ENST00000403461 ERBB3P21860 1342 aa12.14□□□□□ -0.47
CEACAM1-208ENST00000403461 C2orf72A6NCS6 295 aa12.14□□□□□ -0.47
CEACAM1-208ENST00000403461 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
CEACAM1-208ENST00000403461 FOXK1P85037 733 aa12.13□□□□□ -0.47
CEACAM1-208ENST00000403461 E2F4Q16254 413 aa12.13□□□□□ -0.47
CEACAM1-208ENST00000403461 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
CEACAM1-208ENST00000403461 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
CEACAM1-208ENST00000403461 CUX1P39880 1505 aa12.12□□□□□ -0.47
CEACAM1-208ENST00000403461 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
CEACAM1-208ENST00000403461 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
CEACAM1-208ENST00000403461 DSG2Q14126 1118 aa12.11□□□□□ -0.47
CEACAM1-208ENST00000403461 BCANQ96GW7 911 aa12.1□□□□□ -0.47
CEACAM1-208ENST00000403461 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
CEACAM1-208ENST00000403461 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
CEACAM1-208ENST00000403461 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
CEACAM1-208ENST00000403461 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
CEACAM1-208ENST00000403461 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
CEACAM1-208ENST00000403461 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
CEACAM1-208ENST00000403461 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
CEACAM1-208ENST00000403461 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
CEACAM1-208ENST00000403461 NBR1Q14596 966 aa12.02□□□□□ -0.49
CEACAM1-208ENST00000403461 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
CEACAM1-208ENST00000403461 GRIN2AQ12879 1464 aa12.01□□□□□ -0.49
CEACAM1-208ENST00000403461 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
CEACAM1-208ENST00000403461 GPR153Q6NV75 609 aa11.99□□□□□ -0.49
CEACAM1-208ENST00000403461 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
CEACAM1-208ENST00000403461 NUP160Q12769 1436 aa11.98□□□□□ -0.49
CEACAM1-208ENST00000403461 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
CEACAM1-208ENST00000403461 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
CEACAM1-208ENST00000403461 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
CEACAM1-208ENST00000403461 SUPT5HO00267 1087 aaKnown RBP11.97□□□□□ -0.49
CEACAM1-208ENST00000403461 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
CEACAM1-208ENST00000403461 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
CEACAM1-208ENST00000403461 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
CEACAM1-208ENST00000403461 SLC34A2O95436 690 aa11.92□□□□□ -0.5
CEACAM1-208ENST00000403461 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
CEACAM1-208ENST00000403461 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.57e-8■■□□□ 11.4
CEACAM1-208ENST00000403461 DPYSL4O14531 572 aa11.91□□□□□ -0.5
CEACAM1-208ENST00000403461 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
CEACAM1-208ENST00000403461 PRG4Q92954 1404 aaPredicted RBP11.91□□□□□ -0.5
CEACAM1-208ENST00000403461 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
CEACAM1-208ENST00000403461 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
CEACAM1-208ENST00000403461 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
CEACAM1-208ENST00000403461 PTCD2Q8WV60 388 aaKnown RBP11.89□□□□□ -0.51
CEACAM1-208ENST00000403461 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
CEACAM1-208ENST00000403461 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
CEACAM1-208ENST00000403461 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
CEACAM1-208ENST00000403461 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
CEACAM1-208ENST00000403461 FAM69CQ0P6D2 419 aa11.87□□□□□ -0.51
CEACAM1-208ENST00000403461 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
CEACAM1-208ENST00000403461 TBC1D12O60347 775 aa11.86□□□□□ -0.51
CEACAM1-208ENST00000403461 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
CEACAM1-208ENST00000403461 SEMA3EO15041 775 aa11.85□□□□□ -0.51
CEACAM1-208ENST00000403461 PDIA6Q15084 440 aa11.85□□□□□ -0.51
CEACAM1-208ENST00000403461 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
CEACAM1-208ENST00000403461 MYT1LQ9UL68 1186 aa11.84□□□□□ -0.51
CEACAM1-208ENST00000403461 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
CEACAM1-208ENST00000403461 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
CEACAM1-208ENST00000403461 NUDT7P0C024 238 aa11.83□□□□□ -0.52
CEACAM1-208ENST00000403461 ABCC10Q5T3U5 1492 aa11.82□□□□□ -0.52
CEACAM1-208ENST00000403461 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
CEACAM1-208ENST00000403461 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
CEACAM1-208ENST00000403461 EVI5O60447 810 aa11.79□□□□□ -0.52
CEACAM1-208ENST00000403461 MAPKBP1O60336 1514 aa11.79□□□□□ -0.52
CEACAM1-208ENST00000403461 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.52
CEACAM1-208ENST00000403461 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
CEACAM1-208ENST00000403461 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
CEACAM1-208ENST00000403461 PTGER2P43116 358 aa11.76□□□□□ -0.53
CEACAM1-208ENST00000403461 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
CEACAM1-208ENST00000403461 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
CEACAM1-208ENST00000403461 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
CEACAM1-208ENST00000403461 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
CEACAM1-208ENST00000403461 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
CEACAM1-208ENST00000403461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
CEACAM1-208ENST00000403461 IGF1RP08069 1367 aa11.73□□□□□ -0.53
CEACAM1-208ENST00000403461 PTPRGP23470 1445 aa11.73□□□□□ -0.53
CEACAM1-208ENST00000403461 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
CEACAM1-208ENST00000403461 DIP2BQ9P265 1576 aa11.71□□□□□ -0.53
CEACAM1-208ENST00000403461 CARMIL2Q6F5E8 1435 aa11.71□□□□□ -0.53
CEACAM1-208ENST00000403461 PBX2P40425 430 aa11.71□□□□□ -0.53
CEACAM1-208ENST00000403461 TTBK1Q5TCY1 1321 aaPredicted RBP11.7□□□□□ -0.54
CEACAM1-208ENST00000403461 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
CEACAM1-208ENST00000403461 KDM6BO15054 1643 aa11.7□□□□□ -0.54
CEACAM1-208ENST00000403461 ADCY10Q96PN6 1610 aa11.7□□□□□ -0.54
CEACAM1-208ENST00000403461 KIF13AQ9H1H9 1805 aa11.7□□□□□ -0.54
CEACAM1-208ENST00000403461 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
CEACAM1-208ENST00000403461 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
CEACAM1-208ENST00000403461 GRXCR2A6NFK2 248 aa11.68□□□□□ -0.54
CEACAM1-208ENST00000403461 DDX12PQ92771 950 aa11.68□□□□□ -0.54
CEACAM1-208ENST00000403461 CUL7Q14999 1698 aa11.67□□□□□ -0.54
CEACAM1-208ENST00000403461 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms