RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
CEACAM1-208ENST00000403461 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
CEACAM1-208ENST00000403461 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
CEACAM1-208ENST00000403461 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
CEACAM1-208ENST00000403461 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CEACAM1-208ENST00000403461 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
CEACAM1-208ENST00000403461 MSH5O43196 834 aa20.45■□□□□ 0.86
CEACAM1-208ENST00000403461 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
CEACAM1-208ENST00000403461 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
CEACAM1-208ENST00000403461 ADRA2BP18089 450 aa20.32■□□□□ 0.84
CEACAM1-208ENST00000403461 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
CEACAM1-208ENST00000403461 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
CEACAM1-208ENST00000403461 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
CEACAM1-208ENST00000403461 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
CEACAM1-208ENST00000403461 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
CEACAM1-208ENST00000403461 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
CEACAM1-208ENST00000403461 KCNA4P22459 653 aa17.88■□□□□ 0.45
CEACAM1-208ENST00000403461 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
CEACAM1-208ENST00000403461 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
CEACAM1-208ENST00000403461 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
CEACAM1-208ENST00000403461 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
CEACAM1-208ENST00000403461 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
CEACAM1-208ENST00000403461 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
CEACAM1-208ENST00000403461 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
CEACAM1-208ENST00000403461 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
CEACAM1-208ENST00000403461 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
CEACAM1-208ENST00000403461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.324e-8■□□□□ 11.2
CEACAM1-208ENST00000403461 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
CEACAM1-208ENST00000403461 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
CEACAM1-208ENST00000403461 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
CEACAM1-208ENST00000403461 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
CEACAM1-208ENST00000403461 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
CEACAM1-208ENST00000403461 CAPN15O75808 1086 aa16.48■□□□□ 0.23
CEACAM1-208ENST00000403461 ZBTB22O15209 634 aa16.45■□□□□ 0.22
CEACAM1-208ENST00000403461 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
CEACAM1-208ENST00000403461 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
CEACAM1-208ENST00000403461 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
CEACAM1-208ENST00000403461 DSG3P32926 999 aa16.3■□□□□ 0.2
CEACAM1-208ENST00000403461 APLP2Q06481 763 aa16.23■□□□□ 0.19
CEACAM1-208ENST00000403461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
CEACAM1-208ENST00000403461 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
CEACAM1-208ENST00000403461 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
CEACAM1-208ENST00000403461 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
CEACAM1-208ENST00000403461 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
CEACAM1-208ENST00000403461 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
CEACAM1-208ENST00000403461 ABCB7O75027 752 aa16.08■□□□□ 0.16
CEACAM1-208ENST00000403461 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
CEACAM1-208ENST00000403461 POLA2Q14181 598 aa15.72■□□□□ 0.11
CEACAM1-208ENST00000403461 POTEHQ6S545 545 aa15.7■□□□□ 0.1
CEACAM1-208ENST00000403461 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
CEACAM1-208ENST00000403461 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
CEACAM1-208ENST00000403461 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-208ENST00000403461 ABCC9O60706 1549 aa15.32■□□□□ 0.04
CEACAM1-208ENST00000403461 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
CEACAM1-208ENST00000403461 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
CEACAM1-208ENST00000403461 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
CEACAM1-208ENST00000403461 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
CEACAM1-208ENST00000403461 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
CEACAM1-208ENST00000403461 FBLN2P98095 1184 aa15.04■□□□□ -0
CEACAM1-208ENST00000403461 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
CEACAM1-208ENST00000403461 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
CEACAM1-208ENST00000403461 FKBP8Q14318 412 aa14.91□□□□□ -0.02
CEACAM1-208ENST00000403461 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
CEACAM1-208ENST00000403461 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
CEACAM1-208ENST00000403461 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
CEACAM1-208ENST00000403461 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
CEACAM1-208ENST00000403461 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.05
CEACAM1-208ENST00000403461 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
CEACAM1-208ENST00000403461 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
CEACAM1-208ENST00000403461 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
CEACAM1-208ENST00000403461 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
CEACAM1-208ENST00000403461 HAX1O00165 279 aa14.69□□□□□ -0.06
CEACAM1-208ENST00000403461 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
CEACAM1-208ENST00000403461 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
CEACAM1-208ENST00000403461 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
CEACAM1-208ENST00000403461 PROM2Q8N271 834 aa14.54□□□□□ -0.08
CEACAM1-208ENST00000403461 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
CEACAM1-208ENST00000403461 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
CEACAM1-208ENST00000403461 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
CEACAM1-208ENST00000403461 EVX2Q03828 476 aa14.42□□□□□ -0.1
CEACAM1-208ENST00000403461 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
CEACAM1-208ENST00000403461 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
CEACAM1-208ENST00000403461 NACADO15069 1562 aa14.35□□□□□ -0.11
CEACAM1-208ENST00000403461 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
CEACAM1-208ENST00000403461 C19orf67A6NJJ6 358 aa14.29□□□□□ -0.12
CEACAM1-208ENST00000403461 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
CEACAM1-208ENST00000403461 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
CEACAM1-208ENST00000403461 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
CEACAM1-208ENST00000403461 GABBR2O75899 941 aa14.12□□□□□ -0.15
CEACAM1-208ENST00000403461 MYO15BQ96JP2 1530 aa14.11□□□□□ -0.15
CEACAM1-208ENST00000403461 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
CEACAM1-208ENST00000403461 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
CEACAM1-208ENST00000403461 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
CEACAM1-208ENST00000403461 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
CEACAM1-208ENST00000403461 MIER1Q8N108 512 aa13.96□□□□□ -0.17
CEACAM1-208ENST00000403461 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.17
CEACAM1-208ENST00000403461 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
CEACAM1-208ENST00000403461 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-208ENST00000403461 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
CEACAM1-208ENST00000403461 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms