RNA–Protein interactions for RNA: ENST00000400098.6

SNRPN-204, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 4

Gene SNRPN, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-204ENST00000400098 KIF15Q9NS87 1388 aa13.73□□□□□ -0.21
SNRPN-204ENST00000400098 GGT6Q6P531 493 aa13.72□□□□□ -0.21
SNRPN-204ENST00000400098 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
SNRPN-204ENST00000400098 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
SNRPN-204ENST00000400098 KIF3BO15066 747 aa13.71□□□□□ -0.21
SNRPN-204ENST00000400098 CEBPAP49715 358 aaPredicted RBP13.71□□□□□ -0.21
SNRPN-204ENST00000400098 NCOA1Q15788 1441 aa13.71□□□□□ -0.22
SNRPN-204ENST00000400098 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
SNRPN-204ENST00000400098 ITGAEP38570 1179 aa13.7□□□□□ -0.22
SNRPN-204ENST00000400098 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
SNRPN-204ENST00000400098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNRPN-204ENST00000400098 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
SNRPN-204ENST00000400098 ZC3H13Q5T200 1668 aaKnown RBP13.69□□□□□ -0.22
SNRPN-204ENST00000400098 ERBINQ96RT1 1412 aa13.69□□□□□ -0.22
SNRPN-204ENST00000400098 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
SNRPN-204ENST00000400098 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
SNRPN-204ENST00000400098 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
SNRPN-204ENST00000400098 ABCC3O15438 1527 aa13.67□□□□□ -0.22
SNRPN-204ENST00000400098 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
SNRPN-204ENST00000400098 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
SNRPN-204ENST00000400098 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
SNRPN-204ENST00000400098 FAM135AQ9P2D6 1515 aa13.65□□□□□ -0.22
SNRPN-204ENST00000400098 LMTK3Q96Q04 1460 aa13.65□□□□□ -0.22
SNRPN-204ENST00000400098 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
SNRPN-204ENST00000400098 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
SNRPN-204ENST00000400098 UNC13BO14795 1591 aa13.63□□□□□ -0.23
SNRPN-204ENST00000400098 ROCK1Q13464 1354 aa13.63□□□□□ -0.23
SNRPN-204ENST00000400098 ANKRD50Q9ULJ7 1429 aa13.63□□□□□ -0.23
SNRPN-204ENST00000400098 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
SNRPN-204ENST00000400098 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
SNRPN-204ENST00000400098 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
SNRPN-204ENST00000400098 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
SNRPN-204ENST00000400098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.233e-11■■□□□ 13.3
SNRPN-204ENST00000400098 PPP6R1Q9UPN7 881 aa13.6□□□□□ -0.23
SNRPN-204ENST00000400098 PZPP20742 1482 aa13.6□□□□□ -0.23
SNRPN-204ENST00000400098 NPATQ14207 1427 aa13.58□□□□□ -0.24
SNRPN-204ENST00000400098 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
SNRPN-204ENST00000400098 UHRF1BP1Q6BDS2 1440 aa13.57□□□□□ -0.24
SNRPN-204ENST00000400098 TET3O43151 1660 aa13.57□□□□□ -0.24
SNRPN-204ENST00000400098 HSPA2P54652 639 aa13.57□□□□□ -0.24
SNRPN-204ENST00000400098 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
SNRPN-204ENST00000400098 LMTK2Q8IWU2 1503 aa13.57□□□□□ -0.24
SNRPN-204ENST00000400098 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
SNRPN-204ENST00000400098 NAIPQ13075 1403 aa13.56□□□□□ -0.24
SNRPN-204ENST00000400098 STRCQ7RTU9 1775 aa13.56□□□□□ -0.24
SNRPN-204ENST00000400098 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
SNRPN-204ENST00000400098 CEP170BQ9Y4F5 1589 aaPredicted RBP13.56□□□□□ -0.24
SNRPN-204ENST00000400098 E9PCH4 1651 aa13.56□□□□□ -0.24
SNRPN-204ENST00000400098 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
SNRPN-204ENST00000400098 KANK1Q14678 1352 aa13.54□□□□□ -0.24
SNRPN-204ENST00000400098 SYNMO15061 1565 aa13.53□□□□□ -0.24
SNRPN-204ENST00000400098 TNRQ92752 1358 aa13.52□□□□□ -0.25
SNRPN-204ENST00000400098 HFM1A2PYH4 1435 aa13.52□□□□□ -0.25
SNRPN-204ENST00000400098 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
SNRPN-204ENST00000400098 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
SNRPN-204ENST00000400098 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
SNRPN-204ENST00000400098 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
SNRPN-204ENST00000400098 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
SNRPN-204ENST00000400098 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
SNRPN-204ENST00000400098 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
SNRPN-204ENST00000400098 NUP155O75694 1391 aa13.47□□□□□ -0.25
SNRPN-204ENST00000400098 NLRP1Q9C000 1473 aa13.46□□□□□ -0.25
SNRPN-204ENST00000400098 NOS1P29475 1434 aa13.46□□□□□ -0.26
SNRPN-204ENST00000400098 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
SNRPN-204ENST00000400098 RPRD2Q5VT52 1461 aaKnown RBP13.45□□□□□ -0.26
SNRPN-204ENST00000400098 NEURL4Q96JN8 1562 aa13.43□□□□□ -0.26
SNRPN-204ENST00000400098 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
SNRPN-204ENST00000400098 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
SNRPN-204ENST00000400098 ADGRB3O60242 1522 aa13.41□□□□□ -0.26
SNRPN-204ENST00000400098 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
SNRPN-204ENST00000400098 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
SNRPN-204ENST00000400098 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
SNRPN-204ENST00000400098 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
SNRPN-204ENST00000400098 CLTCL1P53675 1640 aa13.39□□□□□ -0.27
SNRPN-204ENST00000400098 MSH5O43196 834 aa13.39□□□□□ -0.27
SNRPN-204ENST00000400098 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
SNRPN-204ENST00000400098 IDI1Q13907 227 aa13.38□□□□□ -0.27
SNRPN-204ENST00000400098 TRPM2O94759 1503 aa13.37□□□□□ -0.27
SNRPN-204ENST00000400098 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
SNRPN-204ENST00000400098 KIF1BO60333 1816 aa13.36□□□□□ -0.27
SNRPN-204ENST00000400098 SLIT1O75093 1534 aa13.36□□□□□ -0.27
SNRPN-204ENST00000400098 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
SNRPN-204ENST00000400098 PTPRTO14522 1441 aa13.35□□□□□ -0.27
SNRPN-204ENST00000400098 PKD2Q13563 968 aa13.34□□□□□ -0.27
SNRPN-204ENST00000400098 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
SNRPN-204ENST00000400098 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
SNRPN-204ENST00000400098 MED14O60244 1454 aa13.32□□□□□ -0.28
SNRPN-204ENST00000400098 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
SNRPN-204ENST00000400098 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
SNRPN-204ENST00000400098 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
SNRPN-204ENST00000400098 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
SNRPN-204ENST00000400098 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
SNRPN-204ENST00000400098 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
SNRPN-204ENST00000400098 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
SNRPN-204ENST00000400098 LTKP29376 864 aa13.3□□□□□ -0.28
SNRPN-204ENST00000400098 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
SNRPN-204ENST00000400098 MPHOSPH9Q99550 1183 aa13.3□□□□□ -0.28
SNRPN-204ENST00000400098 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
SNRPN-204ENST00000400098 LTBP4Q8N2S1 1624 aa13.29□□□□□ -0.28
SNRPN-204ENST00000400098 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms