RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TNRQ92752 1358 aa29.47■■■□□ 2.31
UFD1-202ENST00000399523 RTEL1-TNFRSF6BF6WH68 1400 aa29.46■■■□□ 2.31
UFD1-202ENST00000399523 DHX29Q7Z478 1369 aaKnown RBP29.46■■■□□ 2.31
UFD1-202ENST00000399523 MBD5Q9P267 1494 aa29.46■■■□□ 2.31
UFD1-202ENST00000399523 FBXO31Q5XUX0 539 aaPredicted RBP29.45■■■□□ 2.31
UFD1-202ENST00000399523 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.3
UFD1-202ENST00000399523 ANKLE2Q86XL3 938 aa29.43■■■□□ 2.3
UFD1-202ENST00000399523 PZPP20742 1482 aa29.42■■■□□ 2.3
UFD1-202ENST00000399523 VWDEQ8N2E2 1590 aa29.42■■■□□ 2.3
UFD1-202ENST00000399523 MTUS2Q5JR59 1369 aa29.4■■■□□ 2.3
UFD1-202ENST00000399523 ALKQ9UM73 1620 aa29.4■■■□□ 2.3
UFD1-202ENST00000399523 FAM135AQ9P2D6 1515 aa29.4■■■□□ 2.3
UFD1-202ENST00000399523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.39■■■□□ 2.292e-7■□□□□ 9.2
UFD1-202ENST00000399523 THEMISQ8N1K5 641 aaPredicted RBP29.38■■■□□ 2.29
UFD1-202ENST00000399523 MED14O60244 1454 aa29.37■■■□□ 2.29
UFD1-202ENST00000399523 KIF3BO15066 747 aa29.37■■■□□ 2.29
UFD1-202ENST00000399523 PHF23Q9BUL5 403 aaPredicted RBP29.37■■■□□ 2.29
UFD1-202ENST00000399523 TIAM1Q13009 1591 aa29.37■■■□□ 2.29
UFD1-202ENST00000399523 KDM5DQ9BY66 1539 aa29.36■■■□□ 2.29
UFD1-202ENST00000399523 MIA2Q96PC5 1412 aa29.35■■■□□ 2.29
UFD1-202ENST00000399523 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
UFD1-202ENST00000399523 NPHP4O75161 1426 aaPredicted RBP29.34■■■□□ 2.29
UFD1-202ENST00000399523 NLRP1Q9C000 1473 aa29.34■■■□□ 2.29
UFD1-202ENST00000399523 WASHC2CQ9Y4E1 1318 aa29.32■■■□□ 2.28
UFD1-202ENST00000399523 UGGT1Q9NYU2 1555 aa29.3■■■□□ 2.28
UFD1-202ENST00000399523 CEP162Q5TB80 1403 aa29.26■■■□□ 2.27
UFD1-202ENST00000399523 EHBP1L1Q8N3D4 1523 aa29.25■■■□□ 2.27
UFD1-202ENST00000399523 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
UFD1-202ENST00000399523 CCDC141Q6ZP82 1450 aa29.25■■■□□ 2.27
UFD1-202ENST00000399523 RSPH4AQ5TD94 716 aa29.24■■■□□ 2.27
UFD1-202ENST00000399523 LRRC7Q96NW7 1537 aa29.24■■■□□ 2.27
UFD1-202ENST00000399523 STRCP1A6NGW2 1772 aa29.24■■■□□ 2.27
UFD1-202ENST00000399523 RNF17Q9BXT8 1623 aaKnown RBP29.18■■■□□ 2.26
UFD1-202ENST00000399523 SYNMO15061 1565 aa29.17■■■□□ 2.26
UFD1-202ENST00000399523 CAMSAP2Q08AD1 1489 aa29.16■■■□□ 2.26
UFD1-202ENST00000399523 SENP3Q9H4L4 574 aaPredicted RBP29.14■■■□□ 2.26
UFD1-202ENST00000399523 RGS17Q9UGC6 210 aaPredicted RBP29.14■■■□□ 2.26
UFD1-202ENST00000399523 ZC3H13Q5T200 1668 aaKnown RBP29.1■■■□□ 2.25
UFD1-202ENST00000399523 ABCC3O15438 1527 aa29.1■■■□□ 2.25
UFD1-202ENST00000399523 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
UFD1-202ENST00000399523 TSPY4P0CV99 314 aa29.09■■■□□ 2.25
UFD1-202ENST00000399523 TSPY10P0CW01 314 aa29.09■■■□□ 2.25
UFD1-202ENST00000399523 NCOA2Q15596 1464 aa29.09■■■□□ 2.25
UFD1-202ENST00000399523 ERVK-7P63135 1459 aa29.07■■■□□ 2.24
UFD1-202ENST00000399523 SCAF11Q99590 1463 aaKnown RBP29.03■■■□□ 2.24
UFD1-202ENST00000399523 UBR1Q8IWV7 1749 aa29.03■■■□□ 2.24
UFD1-202ENST00000399523 XIRP1Q702N8 1843 aaKnown RBP28.99■■■□□ 2.23
UFD1-202ENST00000399523 CFAP65Q6ZU64 1925 aaKnown RBP28.99■■■□□ 2.23
UFD1-202ENST00000399523 LTKP29376 864 aa28.99■■■□□ 2.23
UFD1-202ENST00000399523 EIF2AK4Q9P2K8 1649 aaKnown RBP28.98■■■□□ 2.23
UFD1-202ENST00000399523 ARHGAP23Q9P227 1491 aa28.98■■■□□ 2.23
UFD1-202ENST00000399523 MAST1Q9Y2H9 1570 aa28.97■■■□□ 2.23
UFD1-202ENST00000399523 SLIT1O75093 1534 aa28.97■■■□□ 2.23
UFD1-202ENST00000399523 MROH1Q8NDA8 1641 aa28.97■■■□□ 2.23
UFD1-202ENST00000399523 FAM135BQ49AJ0 1406 aa28.96■■■□□ 2.23
UFD1-202ENST00000399523 TXNDC2Q86VQ3 553 aa28.96■■■□□ 2.23
UFD1-202ENST00000399523 CEP152O94986 1710 aa28.91■■■□□ 2.22
UFD1-202ENST00000399523 POTEAQ6S8J7 498 aa28.91■■■□□ 2.22
UFD1-202ENST00000399523 ARHGAP31Q2M1Z3 1444 aa28.88■■■□□ 2.21
UFD1-202ENST00000399523 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
UFD1-202ENST00000399523 TMEM94Q12767 1356 aa28.83■■■□□ 2.21
UFD1-202ENST00000399523 TMEM2Q9UHN6 1383 aa28.83■■■□□ 2.21
UFD1-202ENST00000399523 DUOX2Q9NRD8 1548 aa28.83■■■□□ 2.21
UFD1-202ENST00000399523 KCNA6P17658 529 aa28.79■■■□□ 2.2
UFD1-202ENST00000399523 PRDM15P57071 1507 aaPredicted RBP28.79■■■□□ 2.2
UFD1-202ENST00000399523 LRRC9Q6ZRR7 1453 aa28.78■■■□□ 2.2
UFD1-202ENST00000399523 ROBO1Q9Y6N7 1651 aa28.78■■■□□ 2.2
UFD1-202ENST00000399523 PIK3C2BO00750 1634 aa28.78■■■□□ 2.2
UFD1-202ENST00000399523 MAP3K1Q13233 1512 aa28.75■■■□□ 2.19
UFD1-202ENST00000399523 MYOM3Q5VTT5 1437 aa28.74■■■□□ 2.19
UFD1-202ENST00000399523 KDM5AP29375 1690 aaKnown RBP28.74■■■□□ 2.19
UFD1-202ENST00000399523 PROSER2Q86WR7 435 aaPredicted RBP28.73■■■□□ 2.19
UFD1-202ENST00000399523 TET3O43151 1660 aa28.73■■■□□ 2.19
UFD1-202ENST00000399523 STAG3Q9UJ98 1225 aa28.72■■■□□ 2.19
UFD1-202ENST00000399523 ERBINQ96RT1 1412 aa28.71■■■□□ 2.19
UFD1-202ENST00000399523 KIF15Q9NS87 1388 aa28.71■■■□□ 2.19
UFD1-202ENST00000399523 EFCAB6Q5THR3 1501 aa28.7■■■□□ 2.19
UFD1-202ENST00000399523 IDI1Q13907 227 aa28.69■■■□□ 2.18
UFD1-202ENST00000399523 SLC26A8Q96RN1 970 aa28.69■■■□□ 2.18
UFD1-202ENST00000399523 RBM33Q96EV2 1170 aaKnown RBP28.68■■■□□ 2.18
UFD1-202ENST00000399523 NKTRP30414 1462 aaKnown RBP28.66■■■□□ 2.18
UFD1-202ENST00000399523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.65■■■□□ 2.181e-6■■□□□ 11.7
UFD1-202ENST00000399523 SETD1AO15047 1707 aaKnown RBP28.65■■■□□ 2.18
UFD1-202ENST00000399523 NWD1Q149M9 1564 aa28.64■■■□□ 2.18
UFD1-202ENST00000399523 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
UFD1-202ENST00000399523 RRP7BPQ9NSQ0 103 aa28.64■■■□□ 2.18
UFD1-202ENST00000399523 SLAIN2Q9P270 581 aa28.64■■■□□ 2.18
UFD1-202ENST00000399523 JCADQ9P266 1359 aa28.63■■■□□ 2.17
UFD1-202ENST00000399523 MSH6P52701 1360 aa28.62■■■□□ 2.17
UFD1-202ENST00000399523 KANK1Q14678 1352 aa28.62■■■□□ 2.17
UFD1-202ENST00000399523 ABCC5O15440 1437 aa28.61■■■□□ 2.17
UFD1-202ENST00000399523 VPS8Q8N3P4 1428 aa28.61■■■□□ 2.17
UFD1-202ENST00000399523 PHLPP1O60346 1717 aa28.61■■■□□ 2.17
UFD1-202ENST00000399523 LMTK2Q8IWU2 1503 aa28.61■■■□□ 2.17
UFD1-202ENST00000399523 CROCC2H7BZ55 1655 aa28.59■■■□□ 2.17
UFD1-202ENST00000399523 NOS1P29475 1434 aa28.57■■■□□ 2.16
UFD1-202ENST00000399523 ADGRB3O60242 1522 aa28.55■■■□□ 2.16
UFD1-202ENST00000399523 SLC52A1Q9NWF4 448 aa28.53■■■□□ 2.16
UFD1-202ENST00000399523 COL16A1Q07092 1604 aaPredicted RBP28.53■■■□□ 2.16
UFD1-202ENST00000399523 UPF1Q92900 1129 aaKnown RBP eCLIP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms