RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
SPTLC3-201ENST00000399002 LRRFIP1Q32MZ4 808 aaKnown RBP10.37□□□□□ -0.75
SPTLC3-201ENST00000399002 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
SPTLC3-201ENST00000399002 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
SPTLC3-201ENST00000399002 STK26Q9P289 416 aa10.37□□□□□ -0.75
SPTLC3-201ENST00000399002 KIF21BO75037 1637 aa10.36□□□□□ -0.75
SPTLC3-201ENST00000399002 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
SPTLC3-201ENST00000399002 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
SPTLC3-201ENST00000399002 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
SPTLC3-201ENST00000399002 EVC2Q86UK5 1308 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 RSPH6AQ9H0K4 717 aa10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
SPTLC3-201ENST00000399002 TAF7LQ5H9L4 462 aa10.34□□□□□ -0.75
SPTLC3-201ENST00000399002 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
SPTLC3-201ENST00000399002 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 RRP1P56182 461 aaKnown RBP10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 USP47Q96K76 1375 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 CLSTN1O94985 981 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 SAFB2Q14151 953 aaKnown RBP eCLIP10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 FOXD1Q16676 465 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 KIF3BO15066 747 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
SPTLC3-201ENST00000399002 TPM2P07951 284 aa10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 FANCIQ9NVI1 1328 aa10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 TPM3P06753 285 aa10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 SCAPERQ9BY12 1400 aa10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 PAK3O75914 559 aaPredicted RBP10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 VGFO15240 615 aaPredicted RBP10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 RUFY2Q8WXA3 655 aa10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
SPTLC3-201ENST00000399002 HNRNPMP52272 730 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPTLC3-201ENST00000399002 SLKQ9H2G2 1235 aaPredicted RBP10.31□□□□□ -0.76
SPTLC3-201ENST00000399002 MLECQ14165 292 aa10.31□□□□□ -0.76
SPTLC3-201ENST00000399002 DDX19BQ9UMR2 479 aa10.31□□□□□ -0.76
SPTLC3-201ENST00000399002 EFCAB5A4FU69 1503 aa10.3□□□□□ -0.76
SPTLC3-201ENST00000399002 APBB1O00213 710 aa10.3□□□□□ -0.76
SPTLC3-201ENST00000399002 AMPHP49418 695 aa10.3□□□□□ -0.76
SPTLC3-201ENST00000399002 CNTLNQ9NXG0 1405 aa10.3□□□□□ -0.76
SPTLC3-201ENST00000399002 WWC1Q8IX03 1113 aa10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 COG3Q96JB2 828 aa10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 ISY1Q9ULR0 285 aaKnown RBP10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 SOX12O15370 315 aa10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 REC8O95072 547 aa10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 TPM1P09493 284 aa10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 CCDC70Q6NSX1 233 aa10.29□□□□□ -0.76
SPTLC3-201ENST00000399002 GPS2Q13227 327 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 NGDNQ8NEJ9 315 aaKnown RBP10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 FGD6Q6ZV73 1430 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 PANK3Q9H999 370 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 CASKIN1Q8WXD9 1431 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 H3BQV1 296 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 PRKRIP1Q9H875 184 aaPredicted RBP10.28□□□□□ -0.76
SPTLC3-201ENST00000399002 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.76
SPTLC3-201ENST00000399002 HOOK1Q9UJC3 728 aaKnown RBP10.27□□□□□ -0.76
SPTLC3-201ENST00000399002 PDE4AP27815 886 aa10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 CHMP3Q9Y3E7 222 aa10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 PTPRGP23470 1445 aa10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 GAPVD1Q14C86 1478 aa10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 EHBP1L1Q8N3D4 1523 aa10.27□□□□□ -0.77
SPTLC3-201ENST00000399002 RRBP1Q9P2E9 1410 aaKnown RBP10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 SF3A1Q15459 793 aaKnown RBP10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 GOLGA6L19H0YKK7 550 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 LRRC9Q6ZRR7 1453 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 A0A0U1RQG5 324 aaPredicted RBP10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 TNNT3P45378 269 aaPredicted RBP10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 GSE1Q14687 1217 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 SLC4A10Q6U841 1118 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 FAM184AQ8NB25 1140 aa10.26□□□□□ -0.77
SPTLC3-201ENST00000399002 HSP90AB4PQ58FF6 505 aa10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 FGD5Q6ZNL6 1462 aa10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 SYNE3Q6ZMZ3 975 aa10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 AMOTL1Q8IY63 956 aa10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 CEP89Q96ST8 783 aa10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 CCDC47Q96A33 483 aaKnown RBP10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 JPH4Q96JJ6 628 aa10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 BRD4O60885 1362 aaPredicted RBP10.25□□□□□ -0.77
SPTLC3-201ENST00000399002 CPLX2Q6PUV4 134 aaKnown RBP10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 RUNDC1Q96C34 613 aa10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 AKAP17AQ02040 695 aaKnown RBP10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 TPD52L1Q16890 204 aaPredicted RBP10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 PLEKHH2Q8IVE3 1493 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms