RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
FAM3B-204ENST00000398652 GGT6Q6P531 493 aa22.79■■□□□ 1.24
FAM3B-204ENST00000398652 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
FAM3B-204ENST00000398652 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
FAM3B-204ENST00000398652 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
FAM3B-204ENST00000398652 DEPDC5O75140 1603 aa22.69■■□□□ 1.22
FAM3B-204ENST00000398652 TNRQ92752 1358 aa22.69■■□□□ 1.22
FAM3B-204ENST00000398652 CFDP1Q9UEE9 299 aaPredicted RBP22.69■■□□□ 1.22
FAM3B-204ENST00000398652 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
FAM3B-204ENST00000398652 PZPP20742 1482 aa22.67■■□□□ 1.22
FAM3B-204ENST00000398652 KDM5DQ9BY66 1539 aa22.66■■□□□ 1.22
FAM3B-204ENST00000398652 MED14O60244 1454 aa22.66■■□□□ 1.22
FAM3B-204ENST00000398652 CCNB3Q8WWL7 1395 aa22.65■■□□□ 1.22
FAM3B-204ENST00000398652 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
FAM3B-204ENST00000398652 RNF17Q9BXT8 1623 aaKnown RBP22.65■■□□□ 1.22
FAM3B-204ENST00000398652 STRCP1A6NGW2 1772 aa22.64■■□□□ 1.22
FAM3B-204ENST00000398652 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
FAM3B-204ENST00000398652 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.21
FAM3B-204ENST00000398652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
FAM3B-204ENST00000398652 SYNMO15061 1565 aa22.63■■□□□ 1.21
FAM3B-204ENST00000398652 NLRP1Q9C000 1473 aa22.62■■□□□ 1.21
FAM3B-204ENST00000398652 FBXO31Q5XUX0 539 aaPredicted RBP22.62■■□□□ 1.21
FAM3B-204ENST00000398652 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
FAM3B-204ENST00000398652 UGGT1Q9NYU2 1555 aa22.62■■□□□ 1.21
FAM3B-204ENST00000398652 DHX29Q7Z478 1369 aaKnown RBP22.61■■□□□ 1.21
FAM3B-204ENST00000398652 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
FAM3B-204ENST00000398652 THEMISQ8N1K5 641 aaPredicted RBP22.59■■□□□ 1.21
FAM3B-204ENST00000398652 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
FAM3B-204ENST00000398652 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
FAM3B-204ENST00000398652 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
FAM3B-204ENST00000398652 KIF3BO15066 747 aa22.54■■□□□ 1.2
FAM3B-204ENST00000398652 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
FAM3B-204ENST00000398652 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
FAM3B-204ENST00000398652 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
FAM3B-204ENST00000398652 RGS17Q9UGC6 210 aaPredicted RBP22.52■■□□□ 1.2
FAM3B-204ENST00000398652 WASHC2CQ9Y4E1 1318 aa22.52■■□□□ 1.2
FAM3B-204ENST00000398652 CCDC141Q6ZP82 1450 aa22.48■■□□□ 1.19
FAM3B-204ENST00000398652 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
FAM3B-204ENST00000398652 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
FAM3B-204ENST00000398652 UBR1Q8IWV7 1749 aa22.44■■□□□ 1.18
FAM3B-204ENST00000398652 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
FAM3B-204ENST00000398652 CEP162Q5TB80 1403 aa22.41■■□□□ 1.18
FAM3B-204ENST00000398652 ABCC3O15438 1527 aa22.41■■□□□ 1.18
FAM3B-204ENST00000398652 ERVK-7P63135 1459 aa22.39■■□□□ 1.17
FAM3B-204ENST00000398652 SCAF11Q99590 1463 aaKnown RBP22.39■■□□□ 1.17
FAM3B-204ENST00000398652 CFAP65Q6ZU64 1925 aaKnown RBP22.39■■□□□ 1.17
FAM3B-204ENST00000398652 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
FAM3B-204ENST00000398652 RSPH4AQ5TD94 716 aa22.37■■□□□ 1.17
FAM3B-204ENST00000398652 EIF2AK4Q9P2K8 1649 aaKnown RBP22.35■■□□□ 1.17
FAM3B-204ENST00000398652 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
FAM3B-204ENST00000398652 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
FAM3B-204ENST00000398652 CEP152O94986 1710 aa22.34■■□□□ 1.17
FAM3B-204ENST00000398652 FAM135BQ49AJ0 1406 aa22.34■■□□□ 1.17
FAM3B-204ENST00000398652 SLIT1O75093 1534 aa22.33■■□□□ 1.17
FAM3B-204ENST00000398652 ARHGAP23Q9P227 1491 aa22.33■■□□□ 1.16
FAM3B-204ENST00000398652 NCOA2Q15596 1464 aa22.32■■□□□ 1.16
FAM3B-204ENST00000398652 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
FAM3B-204ENST00000398652 ROBO1Q9Y6N7 1651 aa22.31■■□□□ 1.16
FAM3B-204ENST00000398652 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
FAM3B-204ENST00000398652 TSPY4P0CV99 314 aa22.27■■□□□ 1.16
FAM3B-204ENST00000398652 TSPY10P0CW01 314 aa22.27■■□□□ 1.16
FAM3B-204ENST00000398652 LTKP29376 864 aa22.27■■□□□ 1.16
FAM3B-204ENST00000398652 TXNDC2Q86VQ3 553 aa22.26■■□□□ 1.15
FAM3B-204ENST00000398652 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
FAM3B-204ENST00000398652 MAP3K1Q13233 1512 aa22.22■■□□□ 1.15
FAM3B-204ENST00000398652 PIK3C2BO00750 1634 aa22.22■■□□□ 1.15
FAM3B-204ENST00000398652 TMEM94Q12767 1356 aa22.22■■□□□ 1.15
FAM3B-204ENST00000398652 EID1Q9Y6B2 187 aa22.21■■□□□ 1.15
FAM3B-204ENST00000398652 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.14
FAM3B-204ENST00000398652 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
FAM3B-204ENST00000398652 ARHGAP31Q2M1Z3 1444 aa22.18■■□□□ 1.14
FAM3B-204ENST00000398652 MSH5O43196 834 aa22.18■■□□□ 1.14
FAM3B-204ENST00000398652 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
FAM3B-204ENST00000398652 TMEM2Q9UHN6 1383 aa22.17■■□□□ 1.14
FAM3B-204ENST00000398652 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
FAM3B-204ENST00000398652 DUOX2Q9NRD8 1548 aa22.15■■□□□ 1.14
FAM3B-204ENST00000398652 KCNA6P17658 529 aa22.14■■□□□ 1.13
FAM3B-204ENST00000398652 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
FAM3B-204ENST00000398652 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
FAM3B-204ENST00000398652 TET3O43151 1660 aa22.13■■□□□ 1.13
FAM3B-204ENST00000398652 JCADQ9P266 1359 aa22.12■■□□□ 1.13
FAM3B-204ENST00000398652 PROSER2Q86WR7 435 aaPredicted RBP22.11■■□□□ 1.13
FAM3B-204ENST00000398652 COL16A1Q07092 1604 aaPredicted RBP22.09■■□□□ 1.13
FAM3B-204ENST00000398652 MSH6P52701 1360 aa22.08■■□□□ 1.12
FAM3B-204ENST00000398652 RBM33Q96EV2 1170 aaKnown RBP22.07■■□□□ 1.12
FAM3B-204ENST00000398652 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
FAM3B-204ENST00000398652 UPF1Q92900 1129 aaKnown RBP eCLIP22.06■■□□□ 1.12
FAM3B-204ENST00000398652 SLC26A8Q96RN1 970 aa22.06■■□□□ 1.12
FAM3B-204ENST00000398652 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
FAM3B-204ENST00000398652 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
FAM3B-204ENST00000398652 PPP4R3CPQ6ZMV5 832 aa22.04■■□□□ 1.12
FAM3B-204ENST00000398652 SLAIN2Q9P270 581 aa22.04■■□□□ 1.12
FAM3B-204ENST00000398652 LRP6O75581 1613 aa22.04■■□□□ 1.12
FAM3B-204ENST00000398652 CHD2O14647 1828 aaKnown RBP22.03■■□□□ 1.12
FAM3B-204ENST00000398652 ADGRB3O60242 1522 aa22.02■■□□□ 1.12
FAM3B-204ENST00000398652 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
FAM3B-204ENST00000398652 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
FAM3B-204ENST00000398652 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
FAM3B-204ENST00000398652 FGD6Q6ZV73 1430 aa22.01■■□□□ 1.11
FAM3B-204ENST00000398652 SPATA31A6Q5VVP1 1343 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms