RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ZNF644Q9H582 1327 aaPredicted RBP24.31■■□□□ 1.48
SEC13-206ENST00000397102 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
SEC13-206ENST00000397102 MED1Q15648 1581 aaPredicted RBP24.3■■□□□ 1.48
SEC13-206ENST00000397102 TNRQ92752 1358 aa24.29■■□□□ 1.48
SEC13-206ENST00000397102 PZPP20742 1482 aa24.28■■□□□ 1.48
SEC13-206ENST00000397102 SHANK2Q9UPX8 1470 aa24.28■■□□□ 1.48
SEC13-206ENST00000397102 KDM5DQ9BY66 1539 aa24.28■■□□□ 1.48
SEC13-206ENST00000397102 TOM1O60784 492 aa24.27■■□□□ 1.48
SEC13-206ENST00000397102 HSPA1LP34931 641 aa24.27■■□□□ 1.48
SEC13-206ENST00000397102 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
SEC13-206ENST00000397102 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
SEC13-206ENST00000397102 PIP4K2BP78356 416 aa24.24■■□□□ 1.47
SEC13-206ENST00000397102 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
SEC13-206ENST00000397102 KIF3BO15066 747 aa24.23■■□□□ 1.47
SEC13-206ENST00000397102 VWDEQ8N2E2 1590 aa24.22■■□□□ 1.47
SEC13-206ENST00000397102 CCDC141Q6ZP82 1450 aa24.22■■□□□ 1.47
SEC13-206ENST00000397102 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
SEC13-206ENST00000397102 NLRP1Q9C000 1473 aa24.2■■□□□ 1.47
SEC13-206ENST00000397102 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
SEC13-206ENST00000397102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.461e-6■■■■□ 25.4
SEC13-206ENST00000397102 UGGT1Q9NYU2 1555 aa24.19■■□□□ 1.46
SEC13-206ENST00000397102 MED14O60244 1454 aa24.19■■□□□ 1.46
SEC13-206ENST00000397102 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
SEC13-206ENST00000397102 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
SEC13-206ENST00000397102 THEMISQ8N1K5 641 aaPredicted RBP24.17■■□□□ 1.46
SEC13-206ENST00000397102 CAMSAP2Q08AD1 1489 aa24.17■■□□□ 1.46
SEC13-206ENST00000397102 ALKQ9UM73 1620 aa24.16■■□□□ 1.46
SEC13-206ENST00000397102 NPHP4O75161 1426 aaPredicted RBP24.16■■□□□ 1.46
SEC13-206ENST00000397102 RSPH4AQ5TD94 716 aa24.15■■□□□ 1.46
SEC13-206ENST00000397102 IQGAP1P46940 1657 aa24.15■■□□□ 1.46
SEC13-206ENST00000397102 ARHGEF5Q12774 1597 aa24.12■■□□□ 1.45
SEC13-206ENST00000397102 NCOA2Q15596 1464 aa24.12■■□□□ 1.45
SEC13-206ENST00000397102 ZC3H13Q5T200 1668 aaKnown RBP24.1■■□□□ 1.45
SEC13-206ENST00000397102 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
SEC13-206ENST00000397102 STRCP1A6NGW2 1772 aa24.09■■□□□ 1.45
SEC13-206ENST00000397102 SYNMO15061 1565 aa24.08■■□□□ 1.45
SEC13-206ENST00000397102 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
SEC13-206ENST00000397102 ABCC3O15438 1527 aa24.05■■□□□ 1.44
SEC13-206ENST00000397102 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
SEC13-206ENST00000397102 TSPY4P0CV99 314 aa24.04■■□□□ 1.44
SEC13-206ENST00000397102 TSPY10P0CW01 314 aa24.04■■□□□ 1.44
SEC13-206ENST00000397102 EIF2AK4Q9P2K8 1649 aaKnown RBP24.03■■□□□ 1.44
SEC13-206ENST00000397102 MAST1Q9Y2H9 1570 aa24.02■■□□□ 1.44
SEC13-206ENST00000397102 ERVK-7P63135 1459 aa24.01■■□□□ 1.43
SEC13-206ENST00000397102 UBR1Q8IWV7 1749 aa23.99■■□□□ 1.43
SEC13-206ENST00000397102 MROH1Q8NDA8 1641 aa23.98■■□□□ 1.43
SEC13-206ENST00000397102 CEP152O94986 1710 aa23.97■■□□□ 1.43
SEC13-206ENST00000397102 CFAP65Q6ZU64 1925 aaKnown RBP23.94■■□□□ 1.42
SEC13-206ENST00000397102 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
SEC13-206ENST00000397102 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
SEC13-206ENST00000397102 ARHGAP23Q9P227 1491 aa23.91■■□□□ 1.42
SEC13-206ENST00000397102 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
SEC13-206ENST00000397102 SLIT1O75093 1534 aa23.9■■□□□ 1.42
SEC13-206ENST00000397102 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.42
SEC13-206ENST00000397102 DUOX2Q9NRD8 1548 aa23.88■■□□□ 1.41
SEC13-206ENST00000397102 ARHGAP31Q2M1Z3 1444 aa23.85■■□□□ 1.41
SEC13-206ENST00000397102 PRDM15P57071 1507 aaPredicted RBP23.84■■□□□ 1.41
SEC13-206ENST00000397102 LTKP29376 864 aa23.84■■□□□ 1.41
SEC13-206ENST00000397102 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
SEC13-206ENST00000397102 RGS17Q9UGC6 210 aaPredicted RBP23.82■■□□□ 1.4
SEC13-206ENST00000397102 MYOM3Q5VTT5 1437 aa23.81■■□□□ 1.4
SEC13-206ENST00000397102 PIK3C2BO00750 1634 aa23.81■■□□□ 1.4
SEC13-206ENST00000397102 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
SEC13-206ENST00000397102 EID1Q9Y6B2 187 aa23.8■■□□□ 1.4
SEC13-206ENST00000397102 FAM135BQ49AJ0 1406 aa23.79■■□□□ 1.4
SEC13-206ENST00000397102 ERBINQ96RT1 1412 aa23.78■■□□□ 1.4
SEC13-206ENST00000397102 CROCC2H7BZ55 1655 aa23.78■■□□□ 1.4
SEC13-206ENST00000397102 KDM5AP29375 1690 aaKnown RBP23.78■■□□□ 1.4
SEC13-206ENST00000397102 MAP3K1Q13233 1512 aa23.78■■□□□ 1.4
SEC13-206ENST00000397102 KIF15Q9NS87 1388 aa23.76■■□□□ 1.39
SEC13-206ENST00000397102 TMEM2Q9UHN6 1383 aa23.76■■□□□ 1.39
SEC13-206ENST00000397102 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
SEC13-206ENST00000397102 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
SEC13-206ENST00000397102 TMEM94Q12767 1356 aa23.72■■□□□ 1.39
SEC13-206ENST00000397102 ROBO1Q9Y6N7 1651 aa23.72■■□□□ 1.39
SEC13-206ENST00000397102 STAG3Q9UJ98 1225 aa23.7■■□□□ 1.38
SEC13-206ENST00000397102 ABCC5O15440 1437 aa23.69■■□□□ 1.38
SEC13-206ENST00000397102 TET3O43151 1660 aa23.69■■□□□ 1.38
SEC13-206ENST00000397102 KANK1Q14678 1352 aa23.68■■□□□ 1.38
SEC13-206ENST00000397102 KCNA6P17658 529 aa23.68■■□□□ 1.38
SEC13-206ENST00000397102 LMTK2Q8IWU2 1503 aa23.68■■□□□ 1.38
SEC13-206ENST00000397102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.38
SEC13-206ENST00000397102 RRP7BPQ9NSQ0 103 aa23.67■■□□□ 1.38
SEC13-206ENST00000397102 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
SEC13-206ENST00000397102 NWD1Q149M9 1564 aa23.66■■□□□ 1.38
SEC13-206ENST00000397102 POTEAQ6S8J7 498 aa23.66■■□□□ 1.38
SEC13-206ENST00000397102 NKTRP30414 1462 aaKnown RBP23.65■■□□□ 1.38
SEC13-206ENST00000397102 IDI1Q13907 227 aa23.64■■□□□ 1.37
SEC13-206ENST00000397102 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.37
SEC13-206ENST00000397102 DAPK1P53355 1430 aa23.63■■□□□ 1.37
SEC13-206ENST00000397102 ADGRB3O60242 1522 aa23.63■■□□□ 1.37
SEC13-206ENST00000397102 SLC26A8Q96RN1 970 aa23.62■■□□□ 1.37
SEC13-206ENST00000397102 NOS1P29475 1434 aa23.6■■□□□ 1.37
SEC13-206ENST00000397102 PHLPP1O60346 1717 aa23.59■■□□□ 1.37
SEC13-206ENST00000397102 RBM33Q96EV2 1170 aaKnown RBP23.58■■□□□ 1.37
SEC13-206ENST00000397102 MSH6P52701 1360 aa23.57■■□□□ 1.36
SEC13-206ENST00000397102 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
SEC13-206ENST00000397102 SETD1AO15047 1707 aaKnown RBP23.56■■□□□ 1.36
SEC13-206ENST00000397102 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
SEC13-206ENST00000397102 JCADQ9P266 1359 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms