RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 DNMT1P26358 1616 aaKnown RBP21.59■■□□□ 1.05
SEC13-204ENST00000397099 DUOX2Q9NRD8 1548 aa21.59■■□□□ 1.05
SEC13-204ENST00000397099 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
SEC13-204ENST00000397099 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
SEC13-204ENST00000397099 CERKQ8TCT0 537 aa21.57■■□□□ 1.04
SEC13-204ENST00000397099 ABCC5O15440 1437 aa21.56■■□□□ 1.04
SEC13-204ENST00000397099 DAPK1P53355 1430 aa21.55■■□□□ 1.04
SEC13-204ENST00000397099 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
SEC13-204ENST00000397099 PTPRKQ15262 1439 aa21.54■■□□□ 1.04
SEC13-204ENST00000397099 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
SEC13-204ENST00000397099 WASHC2CQ9Y4E1 1318 aa21.53■■□□□ 1.04
SEC13-204ENST00000397099 NCOA1Q15788 1441 aa21.52■■□□□ 1.04
SEC13-204ENST00000397099 ERBINQ96RT1 1412 aa21.52■■□□□ 1.04
SEC13-204ENST00000397099 CAMSAP1Q5T5Y3 1602 aa21.51■■□□□ 1.03
SEC13-204ENST00000397099 KIF15Q9NS87 1388 aa21.51■■□□□ 1.03
SEC13-204ENST00000397099 PTPRTO14522 1441 aa21.51■■□□□ 1.03
SEC13-204ENST00000397099 MYO3AQ8NEV4 1616 aa21.51■■□□□ 1.03
SEC13-204ENST00000397099 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
SEC13-204ENST00000397099 ZNF142P52746 1687 aaPredicted RBP21.48■■□□□ 1.03
SEC13-204ENST00000397099 PZPP20742 1482 aa21.48■■□□□ 1.03
SEC13-204ENST00000397099 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
SEC13-204ENST00000397099 NCKAP5LQ9HCH0 1330 aa21.46■■□□□ 1.03
SEC13-204ENST00000397099 ADGRL2O95490 1459 aa21.45■■□□□ 1.03
SEC13-204ENST00000397099 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
SEC13-204ENST00000397099 FBXO31Q5XUX0 539 aaPredicted RBP21.44■■□□□ 1.02
SEC13-204ENST00000397099 RRP7BPQ9NSQ0 103 aa21.44■■□□□ 1.02
SEC13-204ENST00000397099 TNRQ92752 1358 aa21.43■■□□□ 1.02
SEC13-204ENST00000397099 ABCC3O15438 1527 aa21.43■■□□□ 1.02
SEC13-204ENST00000397099 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
SEC13-204ENST00000397099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.021e-6■■■■□ 25.4
SEC13-204ENST00000397099 DEPDC5O75140 1603 aa21.41■■□□□ 1.02
SEC13-204ENST00000397099 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
SEC13-204ENST00000397099 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
SEC13-204ENST00000397099 PLA2R1Q13018 1463 aa21.4■■□□□ 1.02
SEC13-204ENST00000397099 KANK1Q14678 1352 aa21.4■■□□□ 1.02
SEC13-204ENST00000397099 PKD2Q13563 968 aa21.4■■□□□ 1.02
SEC13-204ENST00000397099 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
SEC13-204ENST00000397099 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
SEC13-204ENST00000397099 CEP152O94986 1710 aa21.36■■□□□ 1.01
SEC13-204ENST00000397099 ARHGAP31Q2M1Z3 1444 aa21.36■■□□□ 1.01
SEC13-204ENST00000397099 SPATA31D1Q6ZQQ2 1576 aa21.35■■□□□ 1.01
SEC13-204ENST00000397099 ROCK1Q13464 1354 aa21.35■■□□□ 1.01
SEC13-204ENST00000397099 LTBP4Q8N2S1 1624 aa21.33■■□□□ 1.01
SEC13-204ENST00000397099 ZNF335Q9H4Z2 1342 aaPredicted RBP21.32■■□□□ 1
SEC13-204ENST00000397099 ANKRD50Q9ULJ7 1429 aa21.32■■□□□ 1
SEC13-204ENST00000397099 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
SEC13-204ENST00000397099 THEMISQ8N1K5 641 aaPredicted RBP21.31■■□□□ 1
SEC13-204ENST00000397099 ERVK-7P63135 1459 aa21.31■■□□□ 1
SEC13-204ENST00000397099 VWDEQ8N2E2 1590 aa21.3■■□□□ 1
SEC13-204ENST00000397099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
SEC13-204ENST00000397099 UGGT1Q9NYU2 1555 aa21.28■■□□□ 1
SEC13-204ENST00000397099 ANKLE2Q86XL3 938 aa21.27■■□□□ 1
SEC13-204ENST00000397099 CFAP65Q6ZU64 1925 aaKnown RBP21.26■□□□□ 0.99
SEC13-204ENST00000397099 POLR1AO95602 1720 aaPredicted RBP21.26■□□□□ 0.99
SEC13-204ENST00000397099 IQSEC2Q5JU85 1478 aa21.26■□□□□ 0.99
SEC13-204ENST00000397099 RRBP1Q9P2E9 1410 aaKnown RBP21.25■□□□□ 0.99
SEC13-204ENST00000397099 RPRD2Q5VT52 1461 aaKnown RBP21.22■□□□□ 0.99
SEC13-204ENST00000397099 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
SEC13-204ENST00000397099 EFCAB6Q5THR3 1501 aa21.22■□□□□ 0.99
SEC13-204ENST00000397099 NEURL4Q96JN8 1562 aa21.22■□□□□ 0.99
SEC13-204ENST00000397099 UNC13BO14795 1591 aa21.21■□□□□ 0.99
SEC13-204ENST00000397099 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
SEC13-204ENST00000397099 TET3O43151 1660 aa21.19■□□□□ 0.98
SEC13-204ENST00000397099 UBAP1LF5GYI3 381 aa21.19■□□□□ 0.98
SEC13-204ENST00000397099 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
SEC13-204ENST00000397099 NPHP4O75161 1426 aaPredicted RBP21.18■□□□□ 0.98
SEC13-204ENST00000397099 GCC2Q8IWJ2 1684 aa21.18■□□□□ 0.98
SEC13-204ENST00000397099 MED14O60244 1454 aa21.17■□□□□ 0.98
SEC13-204ENST00000397099 ITGAEP38570 1179 aa21.16■□□□□ 0.98
SEC13-204ENST00000397099 SLC52A1Q9NWF4 448 aa21.15■□□□□ 0.98
SEC13-204ENST00000397099 NOS1P29475 1434 aa21.14■□□□□ 0.98
SEC13-204ENST00000397099 IQGAP3Q86VI3 1631 aa21.14■□□□□ 0.97
SEC13-204ENST00000397099 STAG3Q9UJ98 1225 aa21.12■□□□□ 0.97
SEC13-204ENST00000397099 SLIT1O75093 1534 aa21.12■□□□□ 0.97
SEC13-204ENST00000397099 CPS1P31327 1500 aa21.12■□□□□ 0.97
SEC13-204ENST00000397099 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
SEC13-204ENST00000397099 PIK3C2BO00750 1634 aa21.11■□□□□ 0.97
SEC13-204ENST00000397099 ARHGAP23Q9P227 1491 aa21.09■□□□□ 0.97
SEC13-204ENST00000397099 EID1Q9Y6B2 187 aa21.09■□□□□ 0.97
SEC13-204ENST00000397099 SYNMO15061 1565 aa21.09■□□□□ 0.97
SEC13-204ENST00000397099 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
SEC13-204ENST00000397099 SCAF11Q99590 1463 aaKnown RBP21.08■□□□□ 0.97
SEC13-204ENST00000397099 TXNDC2Q86VQ3 553 aa21.08■□□□□ 0.97
SEC13-204ENST00000397099 NUP155O75694 1391 aa21.08■□□□□ 0.96
SEC13-204ENST00000397099 IDI1Q13907 227 aa21.07■□□□□ 0.96
SEC13-204ENST00000397099 ADGRB3O60242 1522 aa21.05■□□□□ 0.96
SEC13-204ENST00000397099 DISP3Q9P2K9 1392 aa21.05■□□□□ 0.96
SEC13-204ENST00000397099 TMEM2Q9UHN6 1383 aa21.05■□□□□ 0.96
SEC13-204ENST00000397099 E9PCH4 1651 aa21.05■□□□□ 0.96
SEC13-204ENST00000397099 TOM1O60784 492 aa21.04■□□□□ 0.96
SEC13-204ENST00000397099 LTKP29376 864 aa21.04■□□□□ 0.96
SEC13-204ENST00000397099 PIP4K2BP78356 416 aa21.04■□□□□ 0.96
SEC13-204ENST00000397099 HFM1A2PYH4 1435 aa21.03■□□□□ 0.96
SEC13-204ENST00000397099 NAIPQ13075 1403 aa21.03■□□□□ 0.96
SEC13-204ENST00000397099 HDGFP51858 240 aaKnown RBP21.02■□□□□ 0.96
SEC13-204ENST00000397099 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
SEC13-204ENST00000397099 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
SEC13-204ENST00000397099 STRCP1A6NGW2 1772 aa20.95■□□□□ 0.94
SEC13-204ENST00000397099 LRRC7Q96NW7 1537 aa20.95■□□□□ 0.94
SEC13-204ENST00000397099 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms